CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name Millenaar_A3_LL_Rep2_ATH1

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
36.5 99.7 134.5 At3g52840 824450 BGAL2 (beta-galactosidase 2) F:cation binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:apoplast;PBMFOA O.I. C.G. H.G.
25.8 99.7 101.4 At1g20190 838608 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
25.4 99.6 200.2 At1g52190 841649 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMFO O.I. C.G. H.G.
21.2 99.6 58.9 At3g13980 820612 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBV O.I. C.G. H.G.
16.4 99.5 96.9 At3g28290 822455 AT14A Encodes a protein with sequence similarity to integrins. Localized to the cytoplasm and plasma membrane. Expressed in all tissues assayed. O.I. C.G. H.G.
14.9 99.4 271.0 At3g13750 820584 BGAL1 (Beta galactosidase 1) beta-galactosidase, glycosyl hydrolase family 35 O.I. C.G. H.G.
14.0 99.4 100.2 At1g20840 838676 TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1) The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues. O.I. C.G. H.G.
11.7 99.3 72.4 At3g16850 820938 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:vacuole, plant-type cell wall;PBFOMA O.I. C.G. H.G.
11.6 99.3 245.2 At5g14920 831344 gibberellin-regulated family protein F:unknown;P:response to gibberellin stimulus;C:endomembrane system;MBOFPVA O.I. C.G. H.G.
11.0 99.2 45.8 At2g43010 818903 PIF4 (phytochrome interacting factor 4) Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB. O.I. C.G. H.G.
10.8 99.2 58.8 At3g07010 819886 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;PBFO O.I. C.G. H.G.
10.4 99.2 17.0 At1g17700 838346 PRA1.F1 (PRENYLATED RAB ACCEPTOR 1.F1) F:molecular_function unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;PMOF O.I. C.G. H.G.
10.1 99.2 129.5 At4g23820 828482 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
9.8 99.1 285.4 At1g62480 842545 vacuolar calcium-binding protein-related F:unknown;P:response to cadmium ion, response to salt stress;C:cellular_component unknown;OMBFPVA O.I. C.G. H.G.
9.5 99.1 490.8 At2g06850 815247 EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE) endoxyloglucan transferase (EXGT-A1) gene O.I. C.G. H.G.
9.5 99.1 12.4 At2g01940 814725 nucleic acid binding / transcription factor/ zinc ion binding May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells. O.I. C.G. H.G.
9.1 99.1 226.7 At1g09750 837504 chloroplast nucleoid DNA-binding protein-related F:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast, cell wall, plant-type cell wall;PMFOB O.I. C.G. H.G.
9.1 99.1 47.7 At2g47930 819405 AGP26 (ARABINOGALACTAN PROTEIN 26) F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OPMVBFA O.I. C.G. H.G.

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