CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM77071

Assay name 20h Col-0 replicate B

GSE experiment GSE3416: Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
16.2 99.5 36.6 At5g58310 835943 MES18 (METHYL ESTERASE 18) Encodes a protein shown to have methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. O.I. C.G. H.G.
13.7 99.4 80.9 At3g55630 824729 ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D) F:tetrahydrofolylpolyglutamate synthase activity;P:one-carbon compound metabolic process;C:cytosol;BOFMPA O.I. C.G. H.G.
12.0 99.3 79.7 At5g37260 833700 RVE2 (REVEILLE 2) Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis. O.I. C.G. H.G.
10.7 99.2 26.2 At2g40670 818662 ARR16 (ARABIDOPSIS RESPONSE REGULATOR 16) response regulator 16 O.I. C.G. H.G.
10.7 99.2 20.2 At1g29720 839850 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
10.5 99.2 24.9 At1g49200 841343 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV O.I. C.G. H.G.
10.4 99.2 24.4 At4g18740 827608 transcription termination factor F:transcription termination factor activity;P:transcription termination;C:unknown;MPOBVF O.I. C.G. H.G.
10.1 99.2 37.3 At4g12830 826895 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:chloroplast;BOMPFA O.I. C.G. H.G.
10.0 99.2 146.2 At2g40100 818599 LHCB4.3 (light harvesting complex PSII) Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II O.I. C.G. H.G.
9.9 99.1 71.0 At4g39710 830126 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BMOPFA O.I. C.G. H.G.
9.4 99.1 29.6 At4g18810 827615 binding / catalytic/ transcription repressor F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast, vacuole;BOPFAM O.I. C.G. H.G.
9.3 99.1 97.0 At5g40850 834085 UPM1 (UROPHORPHYRIN METHYLASE 1) Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine. O.I. C.G. H.G.
9.0 99.1 153.5 At5g65010 836625 ASN2 (ASPARAGINE SYNTHETASE 2) Encodes asparagine synthetase (ASN2). O.I. C.G. H.G.
8.6 99.0 44.2 At1g06830 837195 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOB O.I. C.G. H.G.

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