CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM75514

Assay name Col-0 6h NAA replicate 2

GSE experiment GSE3350: SLR/IAA14-dependent auxin induced lateral root initiation

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1161.0 100.0 148.6 At2g14960 815985 GH3.1 encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin. O.I. C.G. H.G.
956.0 100.0 78.5 At5g06080 830495 LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33) F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
853.6 100.0 62.5 At2g42440 818844 - F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
639.3 100.0 100.6 At5g18560 831974 PUCHI encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. O.I. C.G. H.G.
538.1 100.0 126.2 At3g58190 824988 LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29) This gene contains two auxin-responsive element (AuxRE). O.I. C.G. H.G.
498.7 100.0 90.7 At5g26930 832751 zinc finger (GATA type) family protein F:transcription factor activity, sequence-specific DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM O.I. C.G. H.G.
466.2 100.0 99.8 At4g37295 829884 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
440.8 100.0 85.1 At2g39370 818522 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO O.I. C.G. H.G.
370.3 100.0 166.3 At1g30760 839958 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM O.I. C.G. H.G.
301.2 100.0 43.6 At2g28690 817418 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
217.3 100.0 194.6 At3g02885 821194 GASA5 (GAST1 PROTEIN HOMOLOG 5) F:unknown;P:response to gibberellin stimulus;C:endomembrane system;P O.I. C.G. H.G.
213.4 100.0 265.0 At1g59500 842240 GH3.4 encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. O.I. C.G. H.G.
207.6 100.0 89.1 At3g10870 820257 MES17 (METHYL ESTERASE 17) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem. O.I. C.G. H.G.
192.3 100.0 426.7 At4g27260 828834 WES1 encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. O.I. C.G. H.G.
190.4 100.0 382.6 At3g15540 820793 IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19) IAA induced protein 19 O.I. C.G. H.G.
183.0 100.0 134.7 At4g17350 827447 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFO O.I. C.G. H.G.
173.5 100.0 91.9 At4g13195 826934 CLE44 (CLAVATA3/ESR-RELATED 44) Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE44 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE41 (At3g24770). O.I. C.G. H.G.
157.8 99.9 25.9 At2g47860 819398 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;P O.I. C.G. H.G.
147.1 99.9 138.5 At3g44540 823579 FAR4 (FATTY ACID REDUCTASE 4) F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBPOF O.I. C.G. H.G.
142.8 99.9 61.8 At1g64405 842749 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
135.6 99.9 82.3 At3g26760 822289 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
129.4 99.9 79.0 At2g42430 818843 LBD16 (LATERAL ORGAN BOUNDARIES-DOMAIN 16) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). O.I. C.G. H.G.
124.3 99.9 189.4 At1g03820 839400 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPFMB O.I. C.G. H.G.
123.3 99.9 59.7 At3g54000 824567 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
119.2 99.9 45.8 At5g67430 836879 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PBA O.I. C.G. H.G.
117.1 99.9 49.3 At4g28640 828982 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11) Auxin induced gene, IAA11 (IAA11). O.I. C.G. H.G.
114.8 99.9 165.8 At1g62770 842576 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
107.6 99.9 82.4 At5g14130 831263 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
107.4 99.9 442.4 At2g23170 816849 GH3.3 encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. O.I. C.G. H.G.
104.8 99.9 47.6 At1g29195 839794 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
104.6 99.9 37.8 At5g53290 835410 CRF3 (CYTOKININ RESPONSE FACTOR 3) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
102.7 99.9 80.8 At3g13380 820538 BRL3 (BRI1-LIKE 3) Similar to BRI, brassinosteroid receptor protein. O.I. C.G. H.G.
101.4 99.9 47.1 At5g04980 830380 endonuclease/exonuclease/phosphatase family protein F:hydrolase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
101.3 99.9 212.5 At1g78100 844146 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
100.3 99.9 85.0 At5g05160 830398 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cell wall, plasma membrane;PMOBFVA O.I. C.G. H.G.
89.6 99.9 71.5 At1g77280 844064 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
79.7 99.9 151.5 At5g56080 835707 NAS2 (NICOTIANAMINE SYNTHASE 2) Encodes a protein with nicotianamine synthase activity. Its transcript levels rise in roots in response to zinc deficiency and rise in leaves in response to elevated levels of zinc. O.I. C.G. H.G.
68.6 99.9 37.1 At1g75640 843899 leucine-rich repeat family protein / protein kinase family protein F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
67.1 99.8 50.2 At3g27580 822380 ATPK7 a member of a subfamily of Ser/Thr PKs in plants. O.I. C.G. H.G.
64.9 99.8 65.2 At4g32280 829361 IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29) Auxin inducible protein. O.I. C.G. H.G.
63.3 99.8 28.8 At5g65320 836657 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF O.I. C.G. H.G.
60.3 99.8 271.3 At5g54510 835539 DFL1 (DWARF IN LIGHT 1) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). O.I. C.G. H.G.
60.0 99.8 147.6 At5g41040 834106 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO O.I. C.G. H.G.
59.9 99.8 71.0 At2g25790 817121 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFAV O.I. C.G. H.G.
59.5 99.8 47.9 At5g09800 830840 U-box domain-containing protein F:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;POMBF O.I. C.G. H.G.
59.2 99.8 49.0 At1g14350 837997 FLP (FOUR LIPS) Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88. O.I. C.G. H.G.
59.0 99.8 103.0 At3g24240 822011 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
58.2 99.8 63.4 At1g10380 837577 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
58.1 99.8 15.1 At5g58580 835972 ATL63 (ARABIDOPSIS TÓ F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
57.5 99.8 7.7 At1g05577 837062 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
56.8 99.8 26.6 At3g20830 821631 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MOFPBVA O.I. C.G. H.G.
56.3 99.8 190.1 At2g19970 816516 pathogenesis-related protein, putative F:molecular_function unknown;P:biological_process unknown;C:extracellular region;MPFBO O.I. C.G. H.G.
55.9 99.8 13.6 At4g32780 829414 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;OPBMVFA O.I. C.G. H.G.
54.1 99.8 176.4 At1g77690 844105 LAX3 (LIKE AUX1 3) Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia. O.I. C.G. H.G.
53.7 99.8 14.0 At3g15250 820756 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPV O.I. C.G. H.G.
51.7 99.8 106.5 At5g12420 831117 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF O.I. C.G. H.G.
51.2 99.8 284.2 At1g64390 842747 AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2) F:carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
50.6 99.8 75.3 At1g73590 843693 PIN1 (PIN-FORMED 1) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins. O.I. C.G. H.G.
50.4 99.8 38.3 At2g35770 818149 scpl28 (serine carboxypeptidase-like 28) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
49.8 99.8 83.4 At3g14060 820620 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P O.I. C.G. H.G.
49.4 99.8 12.6 At4g26540 828760 kinase F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
47.4 99.8 315.2 At1g21310 838728 ATEXT3 (EXTENSIN 3) Encodes extensin 3. O.I. C.G. H.G.
47.1 99.8 40.2 At4g25240 828627 SKS1 (SKU5 SIMILAR 1) Encodes GPI-anchored SKU5-like protein. O.I. C.G. H.G.
46.2 99.8 48.5 At3g03170 821064 unknown protein F:unknown;P:unknown;C:cellular_component unknown;P O.I. C.G. H.G.
45.9 99.8 294.5 At2g39700 818553 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
45.2 99.8 172.2 At5g13750 831220 ZIFL1 (ZINC INDUCED FACILITATOR-like 1) F:tetracycline:hydrogen antiporter activity;P:response to antibiotic, tetracycline transport;C:integral to membrane;BFOMAP O.I. C.G. H.G.
45.1 99.8 30.2 At1g19230 838506 respiratory burst oxidase protein E (RbohE) / NADPH oxidase F:in 7 functions;P:defense response;C:integral to membrane, membrane;MFPBOA O.I. C.G. H.G.
44.3 99.8 27.2 At4g14380 827082 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;POM O.I. C.G. H.G.
43.0 99.8 47.5 At2g34140 817975 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
42.4 99.8 173.6 At4g19690 827713 IRT1 (iron-regulated transporter 1) Fe(II) transport protein (IRT1) O.I. C.G. H.G.
42.3 99.8 34.2 At5g49350 3771473 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
42.0 99.8 64.3 At1g14130 837972 2-oxoglutarate-dependent dioxygenase, putative F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:nucleus;POBFM O.I. C.G. H.G.
41.3 99.8 54.2 At2g47140 819327 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
40.8 99.8 107.5 At2g48130 819425 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;PBOM O.I. C.G. H.G.
39.5 99.8 48.8 At4g37290 829883 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
39.5 99.8 39.5 At3g25640 822151 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
38.8 99.8 17.0 At2g01430 814671 ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17) F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOV O.I. C.G. H.G.
38.7 99.8 13.5 At2g23060 816836 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PAOBM O.I. C.G. H.G.
37.8 99.8 229.5 At5g64250 836546 2-nitropropane dioxygenase family / NPD family F:oxidoreductase activity, catalytic activity;P:response to cadmium ion, response to symbiotic fungus, metabolic process;C:unknown;BOFPMA O.I. C.G. H.G.
37.7 99.7 93.4 At5g19530 832073 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. O.I. C.G. H.G.
37.3 99.7 108.3 At1g28680 839768 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
37.0 99.7 86.7 At2g45420 819150 LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18) F:unknown;P:xylem histogenesis;C:nucleus;MPBOFVA O.I. C.G. H.G.
36.8 99.7 17.9 At3g11150 820285 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
36.0 99.7 96.2 At3g06390 819813 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
35.7 99.7 55.5 At4g13235 826940 EDA21 (embryo sac development arrest 21) Encodes a defensin-like (DEFL) family protein. O.I. C.G. H.G.
35.3 99.7 94.0 At5g27120 832770 SAR DNA-binding protein, putative SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein O.I. C.G. H.G.
35.1 99.7 79.8 At2g03730 814900 ACR5 Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding. O.I. C.G. H.G.
35.0 99.7 27.7 At3g63440 825519 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. O.I. C.G. H.G.
34.8 99.7 55.8 At3g14680 820696 CYP72A14 putative cytochrome P450 O.I. C.G. H.G.
34.7 99.7 19.1 At3g20110 821554 CYP705A20 member of CYP705A O.I. C.G. H.G.
34.6 99.7 189.1 At2g33310 817894 IAA13 Auxin induced gene, IAA13 (IAA13). O.I. C.G. H.G.
34.4 99.7 56.0 At4g32650 829400 ATKC1 (ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1) A member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. O.I. C.G. H.G.
34.3 99.7 65.4 At1g74760 - - O.I. C.G. H.G.
34.0 99.7 58.0 At2g47130 819326 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
34.0 99.7 9.5 At2g36210 818193 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO O.I. C.G. H.G.
33.9 99.7 79.2 At3g25290 822123 auxin-responsive family protein F:unknown;P:multicellular organismal development;C:plasma membrane, membrane;PFMOB O.I. C.G. H.G.
33.7 99.7 193.2 At3g53480 824516 PDR9 (PLEIOTROPIC DRUG RESISTANCE 9) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
33.7 99.7 60.2 At2g46740 819287 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMA O.I. C.G. H.G.
33.6 99.7 37.9 At1g34110 840310 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
32.5 99.7 28.4 At1g34670 840371 AtMYB93 (myb domain protein 93) Member of the R2R3 factor gene family. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
1161.0	100.0	148.6	At2g14960	815985	GH3.1	encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.	O.I.	C.G.	H.G.
956.0	100.0	78.5	At5g06080	830495	LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33)	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
853.6	100.0	62.5	At2g42440	818844	-	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
639.3	100.0	100.6	At5g18560	831974	PUCHI	encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis.	O.I.	C.G.	H.G.
538.1	100.0	126.2	At3g58190	824988	LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)	This gene contains two auxin-responsive element (AuxRE).	O.I.	C.G.	H.G.
498.7	100.0	90.7	At5g26930	832751	zinc finger (GATA type) family protein	F:transcription factor activity, sequence-specific DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM	O.I.	C.G.	H.G.
466.2	100.0	99.8	At4g37295	829884	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
440.8	100.0	85.1	At2g39370	818522	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO	O.I.	C.G.	H.G.
370.3	100.0	166.3	At1g30760	839958	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM	O.I.	C.G.	H.G.
301.2	100.0	43.6	At2g28690	817418	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
217.3	100.0	194.6	At3g02885	821194	GASA5 (GAST1 PROTEIN HOMOLOG 5)	F:unknown;P:response to gibberellin stimulus;C:endomembrane system;P	O.I.	C.G.	H.G.
213.4	100.0	265.0	At1g59500	842240	GH3.4	encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.	O.I.	C.G.	H.G.
207.6	100.0	89.1	At3g10870	820257	MES17 (METHYL ESTERASE 17)	Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.	O.I.	C.G.	H.G.
192.3	100.0	426.7	At4g27260	828834	WES1	encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.	O.I.	C.G.	H.G.
190.4	100.0	382.6	At3g15540	820793	IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)	IAA induced protein 19	O.I.	C.G.	H.G.
183.0	100.0	134.7	At4g17350	827447	phosphoinositide binding	F:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
173.5	100.0	91.9	At4g13195	826934	CLE44 (CLAVATA3/ESR-RELATED 44)	Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE44 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE41 (At3g24770).	O.I.	C.G.	H.G.
157.8	99.9	25.9	At2g47860	819398	phototropic-responsive NPH3 family protein	F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;P	O.I.	C.G.	H.G.
147.1	99.9	138.5	At3g44540	823579	FAR4 (FATTY ACID REDUCTASE 4)	F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBPOF	O.I.	C.G.	H.G.
142.8	99.9	61.8	At1g64405	842749	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
135.6	99.9	82.3	At3g26760	822289	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
129.4	99.9	79.0	At2g42430	818843	LBD16 (LATERAL ORGAN BOUNDARIES-DOMAIN 16)	LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).	O.I.	C.G.	H.G.
124.3	99.9	189.4	At1g03820	839400	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPFMB	O.I.	C.G.	H.G.
123.3	99.9	59.7	At3g54000	824567	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
119.2	99.9	45.8	At5g67430	836879	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PBA	O.I.	C.G.	H.G.
117.1	99.9	49.3	At4g28640	828982	IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11)	Auxin induced gene, IAA11 (IAA11).	O.I.	C.G.	H.G.
114.8	99.9	165.8	At1g62770	842576	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
107.6	99.9	82.4	At5g14130	831263	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
107.4	99.9	442.4	At2g23170	816849	GH3.3	encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.	O.I.	C.G.	H.G.
104.8	99.9	47.6	At1g29195	839794	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
104.6	99.9	37.8	At5g53290	835410	CRF3 (CYTOKININ RESPONSE FACTOR 3)	encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
102.7	99.9	80.8	At3g13380	820538	BRL3 (BRI1-LIKE 3)	Similar to BRI, brassinosteroid receptor protein.	O.I.	C.G.	H.G.
101.4	99.9	47.1	At5g04980	830380	endonuclease/exonuclease/phosphatase family protein	F:hydrolase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
101.3	99.9	212.5	At1g78100	844146	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
100.3	99.9	85.0	At5g05160	830398	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cell wall, plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
89.6	99.9	71.5	At1g77280	844064	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
79.7	99.9	151.5	At5g56080	835707	NAS2 (NICOTIANAMINE SYNTHASE 2)	Encodes a protein with nicotianamine synthase activity. Its transcript levels rise in roots in response to zinc deficiency and rise in leaves in response to elevated levels of zinc.	O.I.	C.G.	H.G.
68.6	99.9	37.1	At1g75640	843899	leucine-rich repeat family protein / protein kinase family protein	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
67.1	99.8	50.2	At3g27580	822380	ATPK7	a member of a subfamily of Ser/Thr PKs in plants.	O.I.	C.G.	H.G.
64.9	99.8	65.2	At4g32280	829361	IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29)	Auxin inducible protein.	O.I.	C.G.	H.G.
63.3	99.8	28.8	At5g65320	836657	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF	O.I.	C.G.	H.G.
60.3	99.8	271.3	At5g54510	835539	DFL1 (DWARF IN LIGHT 1)	Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).	O.I.	C.G.	H.G.
60.0	99.8	147.6	At5g41040	834106	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
59.9	99.8	71.0	At2g25790	817121	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFAV	O.I.	C.G.	H.G.
59.5	99.8	47.9	At5g09800	830840	U-box domain-containing protein	F:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;POMBF	O.I.	C.G.	H.G.
59.2	99.8	49.0	At1g14350	837997	FLP (FOUR LIPS)	Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88.	O.I.	C.G.	H.G.
59.0	99.8	103.0	At3g24240	822011	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
58.2	99.8	63.4	At1g10380	837577	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
58.1	99.8	15.1	At5g58580	835972	ATL63 (ARABIDOPSIS TÓ	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
57.5	99.8	7.7	At1g05577	837062	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
56.8	99.8	26.6	At3g20830	821631	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MOFPBVA	O.I.	C.G.	H.G.
56.3	99.8	190.1	At2g19970	816516	pathogenesis-related protein, putative	F:molecular_function unknown;P:biological_process unknown;C:extracellular region;MPFBO	O.I.	C.G.	H.G.
55.9	99.8	13.6	At4g32780	829414	phosphoinositide binding	F:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;OPBMVFA	O.I.	C.G.	H.G.
54.1	99.8	176.4	At1g77690	844105	LAX3 (LIKE AUX1 3)	Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.	O.I.	C.G.	H.G.
53.7	99.8	14.0	At3g15250	820756	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPV	O.I.	C.G.	H.G.
51.7	99.8	106.5	At5g12420	831117	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF	O.I.	C.G.	H.G.
51.2	99.8	284.2	At1g64390	842747	AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2)	F:carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
50.6	99.8	75.3	At1g73590	843693	PIN1 (PIN-FORMED 1)	Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.	O.I.	C.G.	H.G.
50.4	99.8	38.3	At2g35770	818149	scpl28 (serine carboxypeptidase-like 28)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
49.8	99.8	83.4	At3g14060	820620	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P	O.I.	C.G.	H.G.
49.4	99.8	12.6	At4g26540	828760	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
47.4	99.8	315.2	At1g21310	838728	ATEXT3 (EXTENSIN 3)	Encodes extensin 3.	O.I.	C.G.	H.G.
47.1	99.8	40.2	At4g25240	828627	SKS1 (SKU5 SIMILAR 1)	Encodes GPI-anchored SKU5-like protein.	O.I.	C.G.	H.G.
46.2	99.8	48.5	At3g03170	821064	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
45.9	99.8	294.5	At2g39700	818553	ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)	putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
45.2	99.8	172.2	At5g13750	831220	ZIFL1 (ZINC INDUCED FACILITATOR-like 1)	F:tetracycline:hydrogen antiporter activity;P:response to antibiotic, tetracycline transport;C:integral to membrane;BFOMAP	O.I.	C.G.	H.G.
45.1	99.8	30.2	At1g19230	838506	respiratory burst oxidase protein E (RbohE) / NADPH oxidase	F:in 7 functions;P:defense response;C:integral to membrane, membrane;MFPBOA	O.I.	C.G.	H.G.
44.3	99.8	27.2	At4g14380	827082	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;POM	O.I.	C.G.	H.G.
43.0	99.8	47.5	At2g34140	817975	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
42.4	99.8	173.6	At4g19690	827713	IRT1 (iron-regulated transporter 1)	Fe(II) transport protein (IRT1)	O.I.	C.G.	H.G.
42.3	99.8	34.2	At5g49350	3771473	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
42.0	99.8	64.3	At1g14130	837972	2-oxoglutarate-dependent dioxygenase, putative	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:nucleus;POBFM	O.I.	C.G.	H.G.
41.3	99.8	54.2	At2g47140	819327	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
40.8	99.8	107.5	At2g48130	819425	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;PBOM	O.I.	C.G.	H.G.
39.5	99.8	48.8	At4g37290	829883	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
39.5	99.8	39.5	At3g25640	822151	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
38.8	99.8	17.0	At2g01430	814671	ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17)	F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOV	O.I.	C.G.	H.G.
38.7	99.8	13.5	At2g23060	816836	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PAOBM	O.I.	C.G.	H.G.
37.8	99.8	229.5	At5g64250	836546	2-nitropropane dioxygenase family / NPD family	F:oxidoreductase activity, catalytic activity;P:response to cadmium ion, response to symbiotic fungus, metabolic process;C:unknown;BOFPMA	O.I.	C.G.	H.G.
37.7	99.7	93.4	At5g19530	832073	ACL5 (ACAULIS 5)	Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.	O.I.	C.G.	H.G.
37.3	99.7	108.3	At1g28680	839768	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
37.0	99.7	86.7	At2g45420	819150	LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18)	F:unknown;P:xylem histogenesis;C:nucleus;MPBOFVA	O.I.	C.G.	H.G.
36.8	99.7	17.9	At3g11150	820285	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
36.0	99.7	96.2	At3g06390	819813	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
35.7	99.7	55.5	At4g13235	826940	EDA21 (embryo sac development arrest 21)	Encodes a defensin-like (DEFL) family protein.	O.I.	C.G.	H.G.
35.3	99.7	94.0	At5g27120	832770	SAR DNA-binding protein, putative	SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein	O.I.	C.G.	H.G.
35.1	99.7	79.8	At2g03730	814900	ACR5	Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.	O.I.	C.G.	H.G.
35.0	99.7	27.7	At3g63440	825519	CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6)	This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	O.I.	C.G.	H.G.
34.8	99.7	55.8	At3g14680	820696	CYP72A14	putative cytochrome P450	O.I.	C.G.	H.G.
34.7	99.7	19.1	At3g20110	821554	CYP705A20	member of CYP705A	O.I.	C.G.	H.G.
34.6	99.7	189.1	At2g33310	817894	IAA13	Auxin induced gene, IAA13 (IAA13).	O.I.	C.G.	H.G.
34.4	99.7	56.0	At4g32650	829400	ATKC1 (ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1)	A member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1.	O.I.	C.G.	H.G.
34.3	99.7	65.4	At1g74760		-	-	O.I.	C.G.	H.G.
34.0	99.7	58.0	At2g47130	819326	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
34.0	99.7	9.5	At2g36210	818193	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
33.9	99.7	79.2	At3g25290	822123	auxin-responsive family protein	F:unknown;P:multicellular organismal development;C:plasma membrane, membrane;PFMOB	O.I.	C.G.	H.G.
33.7	99.7	193.2	At3g53480	824516	PDR9 (PLEIOTROPIC DRUG RESISTANCE 9)	F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
33.7	99.7	60.2	At2g46740	819287	FAD-binding domain-containing protein	F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMA	O.I.	C.G.	H.G.
33.6	99.7	37.9	At1g34110	840310	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
32.5	99.7	28.4	At1g34670	840371	AtMYB93 (myb domain protein 93)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.

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GSM ID	GSM75514
Assay name	Col-0 6h NAA replicate 2
GSE experiment	GSE3350: SLR/IAA14-dependent auxin induced lateral root initiation

Microarray experiments to specifically-expressed genes

GSM ID GSM75514 Assay name Col-0 6h NAA replicate 2 GSE experiment GSE3350: SLR/IAA14-dependent auxin induced lateral root initiation

GSM ID GSM75514

Assay name Col-0 6h NAA replicate 2

GSE experiment GSE3350: SLR/IAA14-dependent auxin induced lateral root initiation