CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM67087

Assay name Arabidopsis_Stigma03

GSE experiment GSE3056: Arabidopsis Pollination Study

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1955.1 100.0 343.1 At5g19880 832110 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to ethylene stimulus, response to oxidative stress, response to virus, N-terminal protein myristoylation;C:endomembrane system;PFOM O.I. C.G. H.G.
1118.4 100.0 412.9 At1g65450 842857 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
1066.2 100.0 136.8 At1g65445 842856 transferase-related F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
1007.6 100.0 237.0 At1g06520 837163 GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels. O.I. C.G. H.G.
830.6 100.0 314.3 At3g12000 820374 S-locus related protein SLR1, putative (S1) F:sugar binding;P:recognition of pollen;C:endomembrane system;PO O.I. C.G. H.G.
751.0 100.0 76.6 At2g17000 816203 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:membrane;BOFPA O.I. C.G. H.G.
707.3 100.0 201.5 At3g26140 822214 glycosyl hydrolase family 5 protein / cellulase family protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BFPOA O.I. C.G. H.G.
696.0 100.0 303.6 At3g14380 820659 integral membrane family protein F:unknown;P:unknown;C:membrane;P O.I. C.G. H.G.
636.1 100.0 166.3 At4g36110 829768 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
564.6 100.0 212.4 At3g01530 821113 AtMYB57 (myb domain protein 57) Member of the R2R3 factor gene family. O.I. C.G. H.G.
552.9 100.0 104.3 At5g20820 832205 auxin-responsive protein-related F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. C.G. H.G.
549.3 100.0 224.1 At1g25330 839117 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF O.I. C.G. H.G.
548.3 100.0 211.2 At1g28710 839771 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
536.4 100.0 160.7 At1g05450 837046 protease inhibitor/seed storage/lipid transfer protein (LTP)-related Encodes a Protease inhibitor/seed storage/LTP family protein O.I. C.G. H.G.
522.2 100.0 63.6 At4g18540 827586 unknown protein F:unknown;P:biological_process unknown;C:unknown;FPBM O.I. C.G. H.G.
473.7 100.0 123.5 At1g62280 842525 SLAH1 (SLAC1 HOMOLOGUE 1) Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane. O.I. C.G. H.G.
452.2 100.0 107.6 At4g39480 830103 CYP96A9 (CYTOCHROME P450 96 A9) member of CYP96A O.I. C.G. H.G.
446.6 100.0 154.1 At1g30795 839961 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOV O.I. C.G. H.G.
370.1 100.0 90.6 At5g23960 832461 TPS21 (TERPENE SYNTHASE 21) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. O.I. C.G. H.G.
368.8 100.0 280.3 At2g20340 816553 tyrosine decarboxylase, putative F:pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity;P:amino acid metabolic process, response to wounding;C:cellular_component unknown;MBOFPAV O.I. C.G. H.G.
341.7 100.0 55.6 At5g11400 831011 protein kinase-related F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;PMOBFV O.I. C.G. H.G.
309.9 100.0 144.7 At5g67340 836869 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:endomembrane system, ubiquitin ligase complex;PMOFB O.I. C.G. H.G.
291.6 100.0 59.5 At3g19620 821499 glycosyl hydrolase family 3 protein F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cell wall;BOFPAM O.I. C.G. H.G.
275.3 100.0 50.2 At5g36110 833607 CYP716A1 member of CYP716A O.I. C.G. H.G.
244.9 100.0 361.0 At5g59120 836030 ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13) F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
243.7 100.0 46.2 At4g00910 827985 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOF O.I. C.G. H.G.
229.8 100.0 130.2 At1g48330 841253 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
228.4 100.0 38.2 At3g57950 824964 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
224.7 100.0 42.1 At5g38320 833814 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
223.0 100.0 71.1 At5g53710 835452 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
212.4 100.0 39.8 At5g10800 830947 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:cellular_component unknown;MOFPBVA O.I. C.G. H.G.
204.9 100.0 169.5 At5g59810 836102 SBT5.4 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOFAM O.I. C.G. H.G.
195.6 100.0 99.8 At1g03170 839563 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
190.6 100.0 19.8 At3g02940 821178 MYB107 (myb domain protein 107) Encodes a putative transcription factor (MYB107). O.I. C.G. H.G.
184.2 100.0 41.3 At4g16350 827330 CBL6 (CALCINEURIN B-LIKE PROTEIN 6) Calcium sensor protein. Binds CIPK14. O.I. C.G. H.G.
178.3 100.0 57.8 At5g37170 833690 O-methyltransferase family 2 protein F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM O.I. C.G. H.G.
176.1 100.0 32.7 At1g09155 837435 AtPP2-B15 (Phloem protein 2-B15) F:carbohydrate binding;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
165.9 100.0 105.8 At1g61560 842450 MLO6 (MILDEW RESISTANCE LOCUS O 6) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
157.1 99.9 72.5 At4g12410 826850 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
156.8 99.9 309.3 At4g11290 826731 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
151.8 99.9 123.8 At5g16440 831505 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. O.I. C.G. H.G.
147.9 99.9 243.1 At1g20190 838608 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
146.9 99.9 190.5 At2g38110 818389 GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6) Encodes a protein with glycerol-3-phosphate acyltransferase activity. O.I. C.G. H.G.
142.2 99.9 204.4 At2g34810 818046 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to jasmonic acid stimulus, response to wounding;C:endomembrane system;FBPOAM O.I. C.G. H.G.
137.4 99.9 114.3 At2g21430 816682 cysteine proteinase A494, putative / thiol protease, putative F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
136.3 99.9 197.6 At1g67830 843109 ATFXG1 (alpha-fucosidase 1) Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFXG1 was able to remove the t-fucosyl residues of XXFG xyloglucan oligosaccharides. O.I. C.G. H.G.
135.3 99.9 106.1 At4g34990 829651 AtMYB32 (myb domain protein 32) Member of the R2R3 factor gene family. O.I. C.G. H.G.
134.1 99.9 254.4 At1g44970 841062 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
133.8 99.9 124.7 At3g27810 822401 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I. C.G. H.G.
129.1 99.9 74.8 At1g18400 838421 BEE1 (BR Enhanced Expression 1) F:transcription factor activity;P:regulation of transcription;C:nucleus;PFMO O.I. C.G. H.G.
123.1 99.9 210.3 At1g80280 844368 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOPMFA O.I. C.G. H.G.
123.1 99.9 113.2 At3g05640 819731 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation;C:cellular_component unknown;PMOFV O.I. C.G. H.G.
122.7 99.9 36.8 At5g22420 832303 FAR7 (FATTY ACID REDUCTASE 7) F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MPBOF O.I. C.G. H.G.
121.6 99.9 130.2 At3g14060 820620 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P O.I. C.G. H.G.
120.5 99.9 65.4 At1g07220 837233 - F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPFBOV O.I. C.G. H.G.
116.8 99.9 38.3 At1g56710 842127 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
112.3 99.9 131.3 At3g55290 824695 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOMFPAV O.I. C.G. H.G.
106.0 99.9 32.3 At5g43230 834341 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOB O.I. C.G. H.G.
104.5 99.9 109.5 At3g59845 825154 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOFMPA O.I. C.G. H.G.
102.2 99.9 270.2 At2g03980 814924 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
101.7 99.9 16.7 At5g46115 834653 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
99.4 99.9 163.2 At1g78960 844236 ATLUP2 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. O.I. C.G. H.G.
99.2 99.9 285.3 At1g55020 841944 LOX1 lipoxygenase, a defense gene conferring resistance Xanthomonas campestris O.I. C.G. H.G.
98.4 99.9 37.2 At5g40630 834062 ubiquitin family protein F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV O.I. C.G. H.G.
97.4 99.9 305.1 At2g33850 817954 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAV O.I. C.G. H.G.
94.6 99.9 151.7 At3g23410 821922 alcohol oxidase-related Encodes a fatty alcohol oxidase. O.I. C.G. H.G.
94.4 99.9 19.7 At4g21500 828235 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
92.3 99.9 156.9 At3g12710 820453 methyladenine glycosylase family protein F:DNA-3-methyladenine glycosylase I activity, catalytic activity;P:DNA repair, base-excision repair;C:unknown;BOPAM O.I. C.G. H.G.
91.6 99.9 17.0 At5g22960 832360 serine carboxypeptidase S10 family protein F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB O.I. C.G. H.G.
89.4 99.9 208.0 At3g54820 824647 PIP2 F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV O.I. C.G. H.G.
87.5 99.9 72.3 At5g57780 835886 - F:unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
85.5 99.9 46.1 At3g17330 820996 ECT6 (evolutionarily conserved C-terminal region 6) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
82.9 99.9 107.4 At1g35170 840404 - F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPOF O.I. C.G. H.G.
82.9 99.9 80.7 At3g56060 824772 glucose-methanol-choline (GMC) oxidoreductase family protein F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA O.I. C.G. H.G.
80.1 99.9 135.8 At3g06450 819821 anion exchange family protein F:anion exchanger activity;P:anion transport;C:plasma membrane;MFPOBV O.I. C.G. H.G.
78.9 99.9 246.5 At2g39350 818520 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
78.2 99.9 42.0 At3g01750 821087 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOBPFVA O.I. C.G. H.G.
77.8 99.9 37.0 At3g55870 824753 anthranilate synthase, alpha subunit, putative F:oxo-acid-lyase activity, anthranilate synthase activity;P:tryptophan biosynthetic process, biosynthetic process;C:endomembrane system;BOFAPM O.I. C.G. H.G.
77.2 99.9 13.3 At1g30800 839962 - F:molecular_function unknown;P:unknown;C:anchored to membrane;PO O.I. C.G. H.G.
77.0 99.9 285.9 At1g26770 839218 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
76.0 99.9 152.9 At4g19430 827684 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
73.8 99.9 20.1 At3g10560 820221 UNE9 (UNFERTILIZED EMBRYO SAC 9) member of CYP77A O.I. C.G. H.G.
72.8 99.9 101.5 At2g45290 819137 transketolase, putative F:catalytic activity, transketolase activity;P:response to cadmium ion;C:chloroplast stroma, chloroplast;OBMFAP O.I. C.G. H.G.
72.2 99.9 163.6 At1g77610 844096 glucose-6-phosphate/phosphate translocator-related F:organic anion transmembrane transporter activity;P:unknown;C:membrane;PMFOBA O.I. C.G. H.G.
71.1 99.9 78.3 At1g73830 843719 BEE3 (BR ENHANCED EXPRESSION 3) F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMBO O.I. C.G. H.G.
70.7 99.9 345.4 At4g23690 828469 disease resistance-responsive family protein / dirigent family protein F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
70.2 99.9 133.2 At3g03670 821193 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOB O.I. C.G. H.G.
69.1 99.9 121.2 At4g16360 827331 AMP-activated protein kinase F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB O.I. C.G. H.G.
68.9 99.9 304.9 At2g28470 817395 BGAL8 (beta-galactosidase 8) putative beta-galactosidase (BGAL8 gene) O.I. C.G. H.G.
68.1 99.9 86.3 At1g64670 842775 BDG1 (BODYGUARD1) Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself. O.I. C.G. H.G.
67.2 99.8 46.9 At4g19460 827687 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMF O.I. C.G. H.G.
66.0 99.8 55.2 At3g50760 824240 GATL2 (Galacturonosyltransferase-like 2) Encodes a protein with putative galacturonosyltransferase activity. O.I. C.G. H.G.
66.0 99.8 16.9 At1g29630 839840 nuclease F:nuclease activity;P:DNA repair;C:unknown;MFOAPV O.I. C.G. H.G.
65.2 99.8 37.3 At3g25870 822182 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
63.6 99.8 84.8 At1g19300 838512 PARVUS (PARVUS) The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls. O.I. C.G. H.G.
63.6 99.8 46.1 At1g20310 838619 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
62.8 99.8 51.0 At1g22380 838845 AtUGT85A3 (UDP-glucosyl transferase 85A3) F:transferase activity, transferring glycosyl groups, transcription factor activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF O.I. C.G. H.G.
62.4 99.8 84.3 At5g19600 832080 SULTR3 Encodes sulfate transporter Sultr3;5. O.I. C.G. H.G.
61.5 99.8 166.5 At5g21105 832235 L-ascorbate oxidase/ copper ion binding / oxidoreductase F:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:cell wall;BFPMOA O.I. C.G. H.G.
58.7 99.8 48.6 At5g59700 836091 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
1955.1	100.0	343.1	At5g19880	832110	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to ethylene stimulus, response to oxidative stress, response to virus, N-terminal protein myristoylation;C:endomembrane system;PFOM	O.I.	C.G.	H.G.
1118.4	100.0	412.9	At1g65450	842857	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
1066.2	100.0	136.8	At1g65445	842856	transferase-related	F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
1007.6	100.0	237.0	At1g06520	837163	GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1)	Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.	O.I.	C.G.	H.G.
830.6	100.0	314.3	At3g12000	820374	S-locus related protein SLR1, putative (S1)	F:sugar binding;P:recognition of pollen;C:endomembrane system;PO	O.I.	C.G.	H.G.
751.0	100.0	76.6	At2g17000	816203	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;BOFPA	O.I.	C.G.	H.G.
707.3	100.0	201.5	At3g26140	822214	glycosyl hydrolase family 5 protein / cellulase family protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BFPOA	O.I.	C.G.	H.G.
696.0	100.0	303.6	At3g14380	820659	integral membrane family protein	F:unknown;P:unknown;C:membrane;P	O.I.	C.G.	H.G.
636.1	100.0	166.3	At4g36110	829768	auxin-responsive protein, putative	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
564.6	100.0	212.4	At3g01530	821113	AtMYB57 (myb domain protein 57)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
552.9	100.0	104.3	At5g20820	832205	auxin-responsive protein-related	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P	O.I.	C.G.	H.G.
549.3	100.0	224.1	At1g25330	839117	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF	O.I.	C.G.	H.G.
548.3	100.0	211.2	At1g28710	839771	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
536.4	100.0	160.7	At1g05450	837046	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	Encodes a Protease inhibitor/seed storage/LTP family protein	O.I.	C.G.	H.G.
522.2	100.0	63.6	At4g18540	827586	unknown protein	F:unknown;P:biological_process unknown;C:unknown;FPBM	O.I.	C.G.	H.G.
473.7	100.0	123.5	At1g62280	842525	SLAH1 (SLAC1 HOMOLOGUE 1)	Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane.	O.I.	C.G.	H.G.
452.2	100.0	107.6	At4g39480	830103	CYP96A9 (CYTOCHROME P450 96 A9)	member of CYP96A	O.I.	C.G.	H.G.
446.6	100.0	154.1	At1g30795	839961	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOV	O.I.	C.G.	H.G.
370.1	100.0	90.6	At5g23960	832461	TPS21 (TERPENE SYNTHASE 21)	Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.	O.I.	C.G.	H.G.
368.8	100.0	280.3	At2g20340	816553	tyrosine decarboxylase, putative	F:pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity;P:amino acid metabolic process, response to wounding;C:cellular_component unknown;MBOFPAV	O.I.	C.G.	H.G.
341.7	100.0	55.6	At5g11400	831011	protein kinase-related	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;PMOBFV	O.I.	C.G.	H.G.
309.9	100.0	144.7	At5g67340	836869	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:endomembrane system, ubiquitin ligase complex;PMOFB	O.I.	C.G.	H.G.
291.6	100.0	59.5	At3g19620	821499	glycosyl hydrolase family 3 protein	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cell wall;BOFPAM	O.I.	C.G.	H.G.
275.3	100.0	50.2	At5g36110	833607	CYP716A1	member of CYP716A	O.I.	C.G.	H.G.
244.9	100.0	361.0	At5g59120	836030	ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13)	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
243.7	100.0	46.2	At4g00910	827985	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOF	O.I.	C.G.	H.G.
229.8	100.0	130.2	At1g48330	841253	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
228.4	100.0	38.2	At3g57950	824964	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
224.7	100.0	42.1	At5g38320	833814	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
223.0	100.0	71.1	At5g53710	835452	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
212.4	100.0	39.8	At5g10800	830947	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:cellular_component unknown;MOFPBVA	O.I.	C.G.	H.G.
204.9	100.0	169.5	At5g59810	836102	SBT5.4	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOFAM	O.I.	C.G.	H.G.
195.6	100.0	99.8	At1g03170	839563	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
190.6	100.0	19.8	At3g02940	821178	MYB107 (myb domain protein 107)	Encodes a putative transcription factor (MYB107).	O.I.	C.G.	H.G.
184.2	100.0	41.3	At4g16350	827330	CBL6 (CALCINEURIN B-LIKE PROTEIN 6)	Calcium sensor protein. Binds CIPK14.	O.I.	C.G.	H.G.
178.3	100.0	57.8	At5g37170	833690	O-methyltransferase family 2 protein	F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM	O.I.	C.G.	H.G.
176.1	100.0	32.7	At1g09155	837435	AtPP2-B15 (Phloem protein 2-B15)	F:carbohydrate binding;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
165.9	100.0	105.8	At1g61560	842450	MLO6 (MILDEW RESISTANCE LOCUS O 6)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
157.1	99.9	72.5	At4g12410	826850	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
156.8	99.9	309.3	At4g11290	826731	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
151.8	99.9	123.8	At5g16440	831505	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.	O.I.	C.G.	H.G.
147.9	99.9	243.1	At1g20190	838608	ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
146.9	99.9	190.5	At2g38110	818389	GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)	Encodes a protein with glycerol-3-phosphate acyltransferase activity.	O.I.	C.G.	H.G.
142.2	99.9	204.4	At2g34810	818046	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to jasmonic acid stimulus, response to wounding;C:endomembrane system;FBPOAM	O.I.	C.G.	H.G.
137.4	99.9	114.3	At2g21430	816682	cysteine proteinase A494, putative / thiol protease, putative	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
136.3	99.9	197.6	At1g67830	843109	ATFXG1 (alpha-fucosidase 1)	Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFXG1 was able to remove the t-fucosyl residues of XXFG xyloglucan oligosaccharides.	O.I.	C.G.	H.G.
135.3	99.9	106.1	At4g34990	829651	AtMYB32 (myb domain protein 32)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
134.1	99.9	254.4	At1g44970	841062	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
133.8	99.9	124.7	At3g27810	822401	ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)	Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.	O.I.	C.G.	H.G.
129.1	99.9	74.8	At1g18400	838421	BEE1 (BR Enhanced Expression 1)	F:transcription factor activity;P:regulation of transcription;C:nucleus;PFMO	O.I.	C.G.	H.G.
123.1	99.9	210.3	At1g80280	844368	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOPMFA	O.I.	C.G.	H.G.
123.1	99.9	113.2	At3g05640	819731	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation;C:cellular_component unknown;PMOFV	O.I.	C.G.	H.G.
122.7	99.9	36.8	At5g22420	832303	FAR7 (FATTY ACID REDUCTASE 7)	F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MPBOF	O.I.	C.G.	H.G.
121.6	99.9	130.2	At3g14060	820620	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P	O.I.	C.G.	H.G.
120.5	99.9	65.4	At1g07220	837233	-	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPFBOV	O.I.	C.G.	H.G.
116.8	99.9	38.3	At1g56710	842127	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
112.3	99.9	131.3	At3g55290	824695	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOMFPAV	O.I.	C.G.	H.G.
106.0	99.9	32.3	At5g43230	834341	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOB	O.I.	C.G.	H.G.
104.5	99.9	109.5	At3g59845	825154	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOFMPA	O.I.	C.G.	H.G.
102.2	99.9	270.2	At2g03980	814924	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
101.7	99.9	16.7	At5g46115	834653	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
99.4	99.9	163.2	At1g78960	844236	ATLUP2	Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.	O.I.	C.G.	H.G.
99.2	99.9	285.3	At1g55020	841944	LOX1	lipoxygenase, a defense gene conferring resistance Xanthomonas campestris	O.I.	C.G.	H.G.
98.4	99.9	37.2	At5g40630	834062	ubiquitin family protein	F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV	O.I.	C.G.	H.G.
97.4	99.9	305.1	At2g33850	817954	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAV	O.I.	C.G.	H.G.
94.6	99.9	151.7	At3g23410	821922	alcohol oxidase-related	Encodes a fatty alcohol oxidase.	O.I.	C.G.	H.G.
94.4	99.9	19.7	At4g21500	828235	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
92.3	99.9	156.9	At3g12710	820453	methyladenine glycosylase family protein	F:DNA-3-methyladenine glycosylase I activity, catalytic activity;P:DNA repair, base-excision repair;C:unknown;BOPAM	O.I.	C.G.	H.G.
91.6	99.9	17.0	At5g22960	832360	serine carboxypeptidase S10 family protein	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB	O.I.	C.G.	H.G.
89.4	99.9	208.0	At3g54820	824647	PIP2	F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV	O.I.	C.G.	H.G.
87.5	99.9	72.3	At5g57780	835886	-	F:unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
85.5	99.9	46.1	At3g17330	820996	ECT6 (evolutionarily conserved C-terminal region 6)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
82.9	99.9	107.4	At1g35170	840404	-	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPOF	O.I.	C.G.	H.G.
82.9	99.9	80.7	At3g56060	824772	glucose-methanol-choline (GMC) oxidoreductase family protein	F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA	O.I.	C.G.	H.G.
80.1	99.9	135.8	At3g06450	819821	anion exchange family protein	F:anion exchanger activity;P:anion transport;C:plasma membrane;MFPOBV	O.I.	C.G.	H.G.
78.9	99.9	246.5	At2g39350	818520	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
78.2	99.9	42.0	At3g01750	821087	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOBPFVA	O.I.	C.G.	H.G.
77.8	99.9	37.0	At3g55870	824753	anthranilate synthase, alpha subunit, putative	F:oxo-acid-lyase activity, anthranilate synthase activity;P:tryptophan biosynthetic process, biosynthetic process;C:endomembrane system;BOFAPM	O.I.	C.G.	H.G.
77.2	99.9	13.3	At1g30800	839962	-	F:molecular_function unknown;P:unknown;C:anchored to membrane;PO	O.I.	C.G.	H.G.
77.0	99.9	285.9	At1g26770	839218	ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10)	Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
76.0	99.9	152.9	At4g19430	827684	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
73.8	99.9	20.1	At3g10560	820221	UNE9 (UNFERTILIZED EMBRYO SAC 9)	member of CYP77A	O.I.	C.G.	H.G.
72.8	99.9	101.5	At2g45290	819137	transketolase, putative	F:catalytic activity, transketolase activity;P:response to cadmium ion;C:chloroplast stroma, chloroplast;OBMFAP	O.I.	C.G.	H.G.
72.2	99.9	163.6	At1g77610	844096	glucose-6-phosphate/phosphate translocator-related	F:organic anion transmembrane transporter activity;P:unknown;C:membrane;PMFOBA	O.I.	C.G.	H.G.
71.1	99.9	78.3	At1g73830	843719	BEE3 (BR ENHANCED EXPRESSION 3)	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMBO	O.I.	C.G.	H.G.
70.7	99.9	345.4	At4g23690	828469	disease resistance-responsive family protein / dirigent family protein	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
70.2	99.9	133.2	At3g03670	821193	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOB	O.I.	C.G.	H.G.
69.1	99.9	121.2	At4g16360	827331	AMP-activated protein kinase	F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB	O.I.	C.G.	H.G.
68.9	99.9	304.9	At2g28470	817395	BGAL8 (beta-galactosidase 8)	putative beta-galactosidase (BGAL8 gene)	O.I.	C.G.	H.G.
68.1	99.9	86.3	At1g64670	842775	BDG1 (BODYGUARD1)	Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself.	O.I.	C.G.	H.G.
67.2	99.8	46.9	At4g19460	827687	glycosyl transferase family 1 protein	F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMF	O.I.	C.G.	H.G.
66.0	99.8	55.2	At3g50760	824240	GATL2 (Galacturonosyltransferase-like 2)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	H.G.
66.0	99.8	16.9	At1g29630	839840	nuclease	F:nuclease activity;P:DNA repair;C:unknown;MFOAPV	O.I.	C.G.	H.G.
65.2	99.8	37.3	At3g25870	822182	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
63.6	99.8	84.8	At1g19300	838512	PARVUS (PARVUS)	The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.	O.I.	C.G.	H.G.
63.6	99.8	46.1	At1g20310	838619	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
62.8	99.8	51.0	At1g22380	838845	AtUGT85A3 (UDP-glucosyl transferase 85A3)	F:transferase activity, transferring glycosyl groups, transcription factor activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF	O.I.	C.G.	H.G.
62.4	99.8	84.3	At5g19600	832080	SULTR3	Encodes sulfate transporter Sultr3;5.	O.I.	C.G.	H.G.
61.5	99.8	166.5	At5g21105	832235	L-ascorbate oxidase/ copper ion binding / oxidoreductase	F:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:cell wall;BFPMOA	O.I.	C.G.	H.G.
58.7	99.8	48.6	At5g59700	836091	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.

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GSM ID	GSM67087
Assay name	Arabidopsis_Stigma03
GSE experiment	GSE3056: Arabidopsis Pollination Study

Microarray experiments to specifically-expressed genes

GSM ID GSM67087 Assay name Arabidopsis_Stigma03 GSE experiment GSE3056: Arabidopsis Pollination Study

GSM ID GSM67087

Assay name Arabidopsis_Stigma03

GSE experiment GSE3056: Arabidopsis Pollination Study