Microarray experiments to specifically-expressed genes

GSM ID GSM67080
Assay name Arabidopsis_Ovary03
GSE experiment GSE3056: Arabidopsis Pollination Study

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
295.5100.0125.4At1g30795839961hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVO.I.C.G.H.G.
258.8100.075.8At5g23960832461TPS21 (TERPENE SYNTHASE 21)Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.O.I.C.G.H.G.
257.4100.044.0At5g42955834308unknown proteinF:unknown;P:unknown;C:endomembrane system;PO.I.C.G.H.G.
172.7100.096.1At4g21480828233carbohydrate transmembrane transporter/ sugar:hydrogen symporterF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAVO.I.C.G.H.G.
161.099.937.4At5g45910834631GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOMO.I.C.G.H.G.
141.099.939.5At3g56610824828unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
124.199.9164.5At2g34870818052MEE26 (maternal effect embryo arrest 26)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MPOVFBAO.I.C.G.H.G.
109.599.979.3At3g26140822214glycosyl hydrolase family 5 protein / cellulase family proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BFPOAO.I.C.G.H.G.
100.699.914.4At3g45940823737alpha-xylosidase, putativeF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BMFOPAVO.I.C.G.H.G.
95.699.9154.4At1g72290843561trypsin and protease inhibitor family protein / Kunitz family proteinF:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
88.699.922.8At2g21655816704unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
86.799.9120.3At2g39060818492nodulin MtN3 family proteinF:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOO.I.C.G.H.G.
85.099.983.2At1g28710839771unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POO.I.C.G.H.G.
73.299.927.3At4g12530826865protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
71.699.924.7At1g45190841087unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
62.599.818.4At5g20330832155BETAG4F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POO.I.C.G.H.G.
59.799.873.9At1g25330839117basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO.I.C.G.H.G.
58.099.888.6At5g21150832241PAZ domain-containing protein / piwi domain-containing proteinF:nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
55.999.880.1At3g59845825154NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOFMPAO.I.C.G.H.G.
53.599.8126.3At5g44630834491terpene synthase/cyclase family proteinEncodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.O.I.C.G.H.G.
52.399.8166.9At5g59120836030ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
51.999.841.2At5g34883833426unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
51.699.846.8At4g19240827664unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
51.199.816.0At5g22970832361unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
51.099.850.9At1g03170839563unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
51.099.833.4At3g50280824190transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBOO.I.C.G.H.G.
50.899.810.4At3g57840824953self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
48.899.8153.4At1g44970841062peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
48.899.887.9At5g37300833704WSD1Encodes a bifunctional enzyme, wax ester synthase (WS) and diacylglycerol acyltransferase (DGAT). In vitro assay indicated a ratio of 10.9 between its WS and DGAT activities. Both mutant and in vivo expression/analysis in yeast studies indicated a role in wax biosynthesis.O.I.C.G.H.G.
47.899.836.3At5g02190831845PCS1 (PROMOTION OF CELL SURVIVAL 1)encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage.O.I.C.G.H.G.
46.799.824.3At1g52970841730unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
44.899.856.1At5g07280830619EMS1 (EXCESS MICROSPOROCYTES1)Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. ems1 mutants lack the tapetum. Acts as regulator of anther cell differentiationO.I.C.G.H.G.
44.799.818.9At5g12270831102oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
44.699.820.0At5g42230834228scpl41 (serine carboxypeptidase-like 41)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.C.G.H.G.
44.099.845.9At4g09740826560AtGH9B14 (Arabidopsis thaliana glycosyl hydrolase 9B14)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFO.I.C.G.H.G.
42.599.8232.9At5g24420832513glucosamine/galactosamine-6-phosphate isomerase-relatedF:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFPO.I.C.G.H.G.
41.799.8181.2At5g09730830833BXL3 (beta-xylosidase 3)encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.O.I.C.G.H.G.
41.499.817.9At4g18540827586unknown proteinF:unknown;P:biological_process unknown;C:unknown;FPBMO.I.C.G.H.G.
40.999.833.0At1g71890843520SUC5Encodes a sucrose transporter that is expressed in the endosperm. Mutants have delayed accumulation of fatty acids and embryo maturation.O.I.C.G.H.G.
40.599.815.5At1g69100843242aspartic-type endopeptidaseF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;MFOPBO.I.C.G.H.G.
39.499.850.2At3g46770823830transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PO.I.C.G.H.G.
39.199.813.8At1g05490837051chr31 (chromatin remodeling 31)F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:biological_process unknown;C:unknown;MOBFPVAO.I.C.G.H.G.
38.299.824.1At5g58782835993dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putativeF:dehydrodolichyl diphosphate synthase activity;P:dolichol biosynthetic process;C:endomembrane system;OBAFMPO.I.C.G.H.G.
37.299.7143.1At1g57750842150CYP96A15 (CYTOCHROME P450 96 A1)Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis.O.I.C.G.H.G.
36.799.7373.3At1g72260843558THI2.1 (THIONIN 2.1)Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.O.I.C.G.H.G.
36.399.765.4At5g15800831436SEP1 (SEPALLATA1)Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.O.I.C.G.H.G.
36.399.721.4At4g00870827990basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOO.I.C.G.H.G.
35.799.720.8At5g23260832390TT16 (TRANSPARENT TESTA16)Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule.O.I.C.G.H.G.
35.299.785.9At1g034953766646transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO.I.C.G.H.G.
34.699.7108.1At4g12890826901gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOFO.I.C.G.H.G.
34.399.719.2At5g43510834371--O.I.C.G.H.G.
34.299.7101.7At3g28007822424nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
33.899.764.7At4g21590828245ENDO3 (endonuclease 3)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.O.I.C.G.H.G.
33.399.739.8At3g25810822173myrcene/ocimene synthase, putativeF:in 7 functions;P:monoterpene biosynthetic process;C:plastid;POO.I.C.G.H.G.
33.099.755.4At1g51460841571ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPVO.I.C.G.H.G.
30.599.748.5At2g27880817334AGO5 (ARGONAUTE 5)F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBVO.I.C.G.H.G.
30.199.732.3At1g27360839625squamosa promoter-binding protein-like 11 (SPL11)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PO.I.C.G.H.G.
29.899.799.4At5g44620834490CYP706A3member of CYP706AO.I.C.G.H.G.
29.899.773.8At3g55110824677ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPVO.I.C.G.H.G.
29.299.7358.9At4g12960826908gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOFO.I.C.G.H.G.
29.299.7143.7At1g70710843408ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1)endo-1,4-beta-glucanase. Involved in cell elongation.O.I.C.G.H.G.
29.299.739.0At1g27370839626squamosa promoter-binding protein-like 10 (SPL10)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMO.I.C.G.H.G.
28.899.724.5At5g52860835363ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPVO.I.C.G.H.G.
28.799.711.1At5g38330833815LCR80 (Low-molecular-weight cysteine-rich 80)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
28.499.7102.4At3g20520821598SVL3 (SHV3-LIKE 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMO.I.C.G.H.G.
28.199.787.8At2g39330818518JAL23 (JACALIN-RELATED LECTIN 23)F:molecular_function unknown;P:biological_process unknown;C:vacuole;POFO.I.C.G.H.G.
28.199.726.3At2g20595816583unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
26.799.7110.7At3g02310821151SEP2 (SEPALLATA 2)MADS-box protein, binds K domain of AG in vivoO.I.C.G.H.G.
26.699.766.7At2g36190818191AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMAO.I.C.G.H.G.
26.399.732.7At1g03710839427-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBO.I.C.G.H.G.
25.799.778.2At4g09960826586STK (SEEDSTICK)a MADS box transcription factor expressed in the carpel and ovulesO.I.C.G.H.G.
25.299.615.9At1g23420838950INO (INNER NO OUTER)Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.O.I.C.G.H.G.
24.899.648.7At1g10540837595xanthine/uracil permease family proteinF:transmembrane transporter activity;P:transport;C:membrane;BOMPFAVO.I.C.G.H.G.
23.999.656.3At2g42200818820SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9)Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b.O.I.C.G.H.G.
23.699.6120.4At5g62210836342embryo-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPOFVBAO.I.C.G.H.G.
23.299.653.2At1g19640838551JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE)Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.O.I.C.G.H.G.
22.899.657.3At5g37020833672ARF8 (AUXIN RESPONSE FACTOR 8)Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.O.I.C.G.H.G.
22.599.616.0At4g27980828911-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
22.499.69.3At1g66950843013PDR11 (PLEIOTROPIC DRUG RESISTANCE 11)F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPVO.I.C.G.H.G.
21.899.66.3At1g47780841190acyl-protein thioesterase-relatedF:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MBPOFO.I.C.G.H.G.
21.799.680.3At1g11850837732unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVAO.I.C.G.H.G.
21.799.621.3At3g04960819656-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
21.499.6125.9At2g02850814816ARPN (PLANTACYANIN)Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.O.I.C.G.H.G.
21.499.673.8At4g14090827046UDP-glucoronosyl/UDP-glucosyl transferase family proteinThe At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.O.I.C.G.H.G.
21.499.614.8At1g26795839221self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
21.199.610.7At3g04540819610-Encodes a defensin-like (DEFL) family protein.O.I.C.G.H.G.
20.899.69.7At5g56490835750FAD-binding domain-containing proteinF:oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BOFPMAO.I.C.G.H.G.
20.799.662.8At5g60910836212AGL8 (agamous-like 8)MADS box gene negatively regulated by APETALA1O.I.C.G.H.G.
20.599.618.6At3g14395820661unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
20.399.668.4At3g06450819821anion exchange family proteinF:anion exchanger activity;P:anion transport;C:plasma membrane;MFPOBVO.I.C.G.H.G.
20.299.670.9At4g33790829521CER4 (ECERIFERUM 4)Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.O.I.C.G.H.G.
20.199.631.7At5g62230836344ERL1 (ERECTA-LIKE 1)Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development.O.I.C.G.H.G.
19.999.614.7At4g36770829830UDP-glycosyltransferase/ transferase, transferring glycosyl groupsF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
19.899.6105.1At1g52410841671TSA1 (TSK-ASSOCIATING PROTEIN 1)Contains a novel calcium-binding repeat sequence. Binds TSK in vitro. Localizes to small cytoplasmic vesicles in interphase cells. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. May be involved in mitosis together with TSK. Expressed preferentially in the flower and shoot apex. Can form multimers.O.I.C.G.H.G.
19.899.648.0At4g21630828250subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAMO.I.C.G.H.G.
19.099.575.0At5g66590836791allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOO.I.C.G.H.G.
19.099.523.0At4g15160827182lipid binding / structural constituent of cell wallF:lipid binding, structural constituent of cell wall;P:lipid transport;C:endomembrane system;MBOPFVAO.I.C.G.H.G.
19.099.516.5At5g52975835376unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
18.999.526.4At1g05540837056unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
18.899.558.0At1g78780844214pathogenesis-related family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFMO.I.C.G.H.G.



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