Microarray experiments to specifically-expressed genes

GSM ID GSM431571
Assay name pathogen isolates: Polymyxa betae - rep1
GSE experiment GSE17240: Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
70.4100.064.9Contig5614_s_atContig5614--3e-1At1g32380ribose-phosphate pyrophosphokinase 2 / phosphoribosyl diphosphate synthetase 2 (PRS2)O.I.C.G.H.G.
60.4100.00.0HVSMEb0014G03r2_x_atHVSMEb0014G03r2--5e-2At3g48425endonuclease/exonuclease/phosphatase family proteinO.I.C.G.H.G.
49.699.90.1Contig14666_atContig14666--7e+0At2g06095unknown proteinO.I.C.G.H.G.
48.799.937.2Contig13867_atContig13867--6e-3At2g02840-O.I.C.G.H.G.
47.999.90.0Contig9111_atContig9111--6e-2At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.C.G.H.G.
47.699.962.2Contig13867_s_atContig13867--6e-3At2g02840-O.I.C.G.H.G.
46.499.90.4Contig14459_atContig14459--2e+0At5g27944sequence-specific DNA binding / transcription factorO.I.C.G.H.G.
44.399.925.2Contig5995_atContig5995--2e+0At3g12160RABA4D (RAB GTPASE HOMOLOG A4D)O.I.C.G.H.G.
42.299.928.8Contig484_x_atContig484--1e-38At1g09200histone H3O.I.C.G.H.G.
41.999.94.0HZ48K22r_atHZ48K22r--3e-13At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.C.G.H.G.
39.899.92.6Contig13573_atContig13573--4e+0At4g31441unknown proteinO.I.C.G.H.G.
39.099.9124.6HS08O16u_s_atHS08O16u--2e+1At5g62440-O.I.C.G.H.G.
38.499.92.9Contig11969_atContig11969--2e-6At5g04330cytochrome P450, putative / ferulate-5-hydroxylase, putativeO.I.C.G.H.G.
37.399.9192.7Contig484_s_atContig484--1e-38At1g09200histone H3O.I.C.G.H.G.
36.599.90.0Mla12DH_orf_3pri12_atMla12DH_orf_3pri12--6e-1At4g2362050S ribosomal protein-relatedO.I.C.G.H.G.
35.299.965.3HV11C08u_x_atHV11C08u--7e+0At3g58170BS14A (BET1P/SFT1P-LIKE PROTEIN 14A)O.I.C.G.H.G.
35.299.96.6Contig12070_atContig12070--1e-5At1g68850peroxidase, putativeO.I.C.G.H.G.
35.299.93.4Contig26515_atContig26515--2e+1At5g41992CPuORF58 (Conserved peptide upstream open reading frame 58)O.I.C.G.H.G.
33.999.937.5Contig382_s_atContig382--1e+1At5g62360invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
33.799.9100.0Contig5311_atContig5311O-methyltransferase-7e-1At1g62900O-methyltransferase, putativeO.I.C.G.H.G.
33.499.928.4HV03D01u_atHV03D01u--1e+0At3g45320unknown proteinO.I.C.G.H.G.
33.199.90.0Contig26110_atContig26110--3e+0At5g56452-O.I.C.G.H.G.
32.399.925.3Contig23761_atContig23761--1e+0At4g09070-O.I.C.G.H.G.
32.199.92.0Contig4196_s_atContig4196--2e-1At5g25010unknown proteinO.I.C.G.H.G.
31.599.90.3Contig25852_atContig25852--5e-1At4g28840unknown proteinO.I.C.G.H.G.
31.599.90.0HT12B02u_atHT12B02u--1e+0At5g43680unknown proteinO.I.C.G.H.G.
30.999.9180.4Contig10261_s_atContig10261--3e+0At4g32090galactosyltransferaseO.I.C.G.H.G.
30.399.995.6Contig5996_s_atContig5996--1e+0At3g12160RABA4D (RAB GTPASE HOMOLOG A4D)O.I.C.G.H.G.
30.299.90.1HT07M06u_atHT07M06u--1e+0At1g02870unknown proteinO.I.C.G.H.G.
30.199.90.0Contig1710_atContig1710--3e-1At5g66400RAB18 (RESPONSIVE TO ABA 18)O.I.C.G.H.G.
29.699.90.0HVSMEf0011J16r2_atHVSMEf0011J16r2--1e+0At1g58100TCP family transcription factor, putativeO.I.C.G.H.G.
29.199.94.9Contig17982_x_atContig17982--2e+1At5g05340peroxidase, putativeO.I.C.G.H.G.
28.499.850.1Contig14743_atContig14743--5e+0At5g20885zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
28.399.80.1HVSMEf0021D01r2_x_atHVSMEf0021D01r2--1e+1At4g38700disease resistance-responsive family proteinO.I.C.G.H.G.
27.699.833.3HVSMEl0010A03r2_s_atHVSMEl0010A03r2--1e+1At1g72130proton-dependent oligopeptide transport (POT) family proteinO.I.C.G.H.G.
27.599.818.6Contig12634_atContig12634--6e+0At1g60870MEE9 (maternal effect embryo arrest 9)O.I.C.G.H.G.
27.499.833.0HD13B05r_s_atHD13B05r--7e-1At4g39700heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.C.G.H.G.
27.499.824.8Contig5013_atContig5013--2e+0At1g22480plastocyanin-like domain-containing proteinO.I.C.G.H.G.
27.299.81.8Contig3511_atContig3511--3e-1At4g28240wound-responsive protein-relatedO.I.C.G.H.G.
26.899.820.3Contig4113_atContig4113--2e+0At4g29190zinc finger (CCCH-type) family proteinO.I.C.G.H.G.
26.899.82.4Contig25479_atContig25479--5e+0At2g19830SNF7.2O.I.C.G.H.G.
26.599.867.4Contig5313_s_atContig5313--1e+0At4g1500060S ribosomal protein L27 (RPL27C)O.I.C.G.H.G.
26.499.84.1Contig18891_atContig18891--3e+0At1g78150unknown proteinO.I.C.G.H.G.
26.499.80.0HV13D09r_atHV13D09r--4e+0At5g36960unknown proteinO.I.C.G.H.G.
26.299.835.4Contig8958_atContig8958--2e+0At1g17190ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26)O.I.C.G.H.G.
26.299.80.9Contig24452_atContig24452--2e+0At5g54570BGLU41 (BETA GLUCOSIDASE 41)O.I.C.G.H.G.
26.199.82.4HVSMEf0015C21r2_atHVSMEf0015C21r2--4e+0At3g50764unknown proteinO.I.C.G.H.G.
25.699.826.7HVSMEf0016E23r2_s_atHVSMEf0016E23r2--9e-1At2g30130ASL5O.I.C.G.H.G.
25.599.80.3Contig1630_atContig1630--5e-1At1g69180CRC (CRABS CLAW)O.I.C.G.H.G.
25.499.844.6Contig13977_atContig13977--2e+0At5g48850ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)O.I.C.G.H.G.
25.499.85.6Contig17315_atContig17315--1e+0At5g19875unknown proteinO.I.C.G.H.G.
25.499.80.6Contig21935_atContig21935--1e+0At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)O.I.C.G.H.G.
25.499.80.5Contig20357_atContig20357--5e+0At1g09760U2A' (U2 small nuclear ribonucleoprotein A)O.I.C.G.H.G.
25.399.88.0Contig7887_atContig7887--2e+0At5g66640DAR3 (DA1-RELATED PROTEIN 3)O.I.C.G.H.G.
25.399.80.7Contig11921_x_atContig11921--1e-2At5g20560beta-1,3-glucanase, putativeO.I.C.G.H.G.
24.899.87.5Contig10672_atContig10672--7e+0At5g18690AGP25 (ARABINOGALACTAN PROTEINS 25)O.I.C.G.H.G.
24.899.86.2Contig5587_atContig5587--8e-1At2g30130ASL5O.I.C.G.H.G.
24.799.85.6HW09M17u_atHW09M17u--4e+0At5g14660PDF1B (PEPTIDE DEFORMYLASE 1B)O.I.C.G.H.G.
24.599.8271.0HY03N19u_s_atHY03N19u--2e+0At5g06950AHBP-1BO.I.C.G.H.G.
24.299.81.0Contig13477_atContig13477--2e-3At1g72230plastocyanin-like domain-containing proteinO.I.C.G.H.G.
24.299.80.2Contig21253_atContig21253--2e+1At5g17165unknown proteinO.I.C.G.H.G.
24.199.80.0rbags5f04_atrbags5f04--2e+0At3g61678unknown proteinO.I.C.G.H.G.
23.899.827.6Contig5038_atContig5038--3e+0At1g62900O-methyltransferase, putativeO.I.C.G.H.G.
23.899.815.9Contig9200_atContig9200--6e-1At5g10230ANNAT7 (ANNEXIN ARABIDOPSIS 7)O.I.C.G.H.G.
23.799.874.1Contig8905_atContig8905--6e-1At3g21520unknown proteinO.I.C.G.H.G.
23.599.81.0Contig17982_s_atContig17982--2e+1At5g05340peroxidase, putativeO.I.C.G.H.G.
23.599.80.0HW06J12u_atHW06J12u--4e+0At4g17585unknown proteinO.I.C.G.H.G.
23.299.88.2Contig19751_atContig19751--5e+0At3g03610phagocytosis and cell motility protein ELMO1-relatedO.I.C.G.H.G.
23.299.82.0Contig17982_atContig17982--2e+1At5g05340peroxidase, putativeO.I.C.G.H.G.
23.099.86.9Contig1865_atContig1865--2e-4At1g14540anionic peroxidase, putativeO.I.C.G.H.G.
22.999.813.9Contig12204_s_atContig12204--4e+0At2g45660AGL20 (AGAMOUS-LIKE 20)O.I.C.G.H.G.
22.999.81.3HVSMEf0011D04r2_atHVSMEf0011D04r2--1e+1At5g64900PROPEP1O.I.C.G.H.G.
22.899.80.4HVSMEf0002J09r2_atHVSMEf0002J09r2--1e+1At4g02380SAG21 (SENESCENCE-ASSOCIATED GENE 21)O.I.C.G.H.G.
22.799.80.9Contig19867_atContig19867--3e-1At3g20750zinc finger (GATA type) family proteinO.I.C.G.H.G.
22.599.8238.1HVSMEf0005J23f_s_atHVSMEf0005J23f--3e+0At2g32720CB5-B (CYTOCHROME B5 ISOFORM B)O.I.C.G.H.G.
22.499.815.3Contig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)O.I.C.G.H.G.
22.099.819.9Contig5871_atContig5871--2e+0At2g38860YLS5O.I.C.G.H.G.
21.699.8162.0Contig6344_atContig6344--3e+0At5g639903'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeO.I.C.G.H.G.
21.599.847.1HW03F12u_s_atHW03F12u--2e+0At4g11745kelch repeat-containing proteinO.I.C.G.H.G.
21.599.842.6Contig3547_s_atContig3547--4e-1At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)O.I.C.G.H.G.
21.599.80.1Contig19015_atContig19015--3e-1At4g35350XCP1 (XYLEM CYSTEINE PEPTIDASE 1)O.I.C.G.H.G.
21.499.70.6HA30K22r_atHA30K22r--4e-3At1g51650ATP synthase epsilon chain, mitochondrialO.I.C.G.H.G.
21.399.79.0Contig4174_atContig4174--6e-1At4g01700chitinase, putativeO.I.C.G.H.G.
21.399.77.4Contig7208_atContig7208--2e+0At4g28060cytochrome c oxidase subunit 6b, putativeO.I.C.G.H.G.
21.299.712.3Contig654_s_atContig654--2e-16At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)O.I.C.G.H.G.
21.199.716.3Contig711_s_atContig711--3e-2At5g53590auxin-responsive family proteinO.I.C.G.H.G.
21.199.70.0Contig8213_atContig8213--9e+0At5g44060unknown proteinO.I.C.G.H.G.
20.999.71.4Contig11240_atContig11240--2e-8At2g01170BAT1 (BIDIRECTIONAL AMINO ACID TRANSPORTER 1)O.I.C.G.H.G.
20.899.7157.4EBem09_SQ001_O02_s_atEBem09_SQ001_O02--2e-1At5g25540CID6 (CTC-Interacting Domain 6)O.I.C.G.H.G.
20.799.70.0Contig14816_atContig14816--9e+0At5g07200YAP169O.I.C.G.H.G.
20.599.750.7Contig9564_atContig9564--1e+0At5g01350unknown proteinO.I.C.G.H.G.
20.599.711.0Contig11421_atContig11421--1e+0At3g48185unknown proteinO.I.C.G.H.G.
20.399.7105.0Contig1736_atContig1736lipoxygenase 1 protein-1e+0At3g22400LOX5O.I.C.G.H.G.
20.299.70.2EBro06_SQ001_J17_atEBro06_SQ001_J17--2e+0At4g38225unknown proteinO.I.C.G.H.G.
19.899.75.9Contig12866_atContig12866--1e-5At3g49960peroxidase, putativeO.I.C.G.H.G.
19.799.79.8Contig19847_atContig19847--1e+0At1g71750phosphoribosyltransferase family proteinO.I.C.G.H.G.
19.799.77.3Contig5312_atContig5312--1e+1At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)O.I.C.G.H.G.
19.799.76.8HVSMEf0003C10r2_atHVSMEf0003C10r2--8e+0At2g33810SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)O.I.C.G.H.G.
19.599.718.4Contig13712_atContig13712--2e+0At4g08869-O.I.C.G.H.G.
19.499.727.5Contig5994_s_atContig5994--3e+0At5g56060ATP binding / nucleotide binding / phenylalanine-tRNA ligaseO.I.C.G.H.G.



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