Microarray experiments to specifically-expressed genes

GSM ID GSM409431
Assay name 9311_young panicle 2cm, biological rep2
GSE experiment GSE16265: SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
48.599.919.3Os06g0138900AK105368.1-Hypothetical protein7e-1At3g28630-O.I.C.G.H.G.
45.499.92.1Os04g0682400AK072470.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-3At3g26420ATRZ-1AO.I.C.G.H.G.
45.199.95.8Os01g0726400AY177699.1-Transcription factor, MADS-box domain containingprotein4e-4At5g10140FLC (FLOWERING LOCUS C)O.I.C.G.H.G.
44.899.913.0Os05g0124000AK105314.1-Ankyrin repeat containing protein4e+0At5g65410HB25 (HOMEOBOX PROTEIN 25)O.I.C.G.H.G.
44.699.95.8Os08g0114200AK106851.1-Endoglucanase 1 precursor (EC 3.2.1.4)(Endo-1,4-beta-glucanase) (Abscission cellulase 1)6e-5At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
42.699.914.1Os03g0709100AK061596.1-Basic blue protein (Cusacyanin) (Plantacyanin)(CBP)4e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.C.G.H.G.
41.299.99.0Os11g0568300AK064398.1-HMG-I and HMG-Y, DNA-binding domain containingprotein2e-4At4g37110protein binding / zinc ion bindingO.I.C.G.H.G.
41.299.90.6Os02g0645000AK111136.1-Zn-finger, RING domain containing protein8e+0At4g18620-O.I.C.G.H.G.
39.899.95.7Os03g06802009631.m04636-TPR-like domain containing protein4e-2At4g27310zinc finger (B-box type) family proteinO.I.C.G.H.G.
39.299.911.4Os03g0416300AK058400.1-COBRA-like protein 2 precursor7e-8At5g60920COB (COBRA)O.I.C.G.H.G.
37.799.810.5Os12g01577009640.m00533-Conserved hypothetical protein6e-1At4g26880stigma-specific Stig1 family proteinO.I.C.G.H.G.
37.199.815.9Os02g0733300AK101108.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)1e-15At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
37.199.87.6Os01g0312800AK106887.1-Endo-1,4-beta-glucanase precursor (EC 3.2.1.4)3e-4At1g02800ATCEL2O.I.C.G.H.G.
35.199.822.3Os10g0347000AK073552.1-Conserved hypothetical protein2e-1At1g61900unknown proteinO.I.C.G.H.G.
34.799.812.2Os02g0797400AK073980.1-MCM protein 5 family protein4e-56At2g07690minichromosome maintenance family protein / MCM family proteinO.I.C.G.H.G.
34.699.821.4Os04g0536300AK070205.1-YABBY protein family protein5e-23At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
33.599.811.2Os12g0636100AK072712.1-TPR-like domain containing protein2e-1At2g36695unknown proteinO.I.C.G.H.G.
33.599.84.4Os05g0412800AA752929-Glutathione S-transferase GST 41 (EC 2.5.1.18)5e+0At2g44578protein binding / zinc ion bindingO.I.C.G.H.G.
33.099.85.7Os09g0111100AK103499.1-Cyclin, N-terminal domain containing protein9e-1At5g44570unknown proteinO.I.C.G.H.G.
32.599.83.8Os07g0129700AF050181.1-OSH15 protein (Homeobox gene)3e-19At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.C.G.H.G.
31.499.75.2Os11g0137000AK103181.1-PIN1-like auxin transport protein2e-39At2g01420PIN4 (PIN-FORMED 4)O.I.C.G.H.G.
30.699.73.7Os06g0471100CB632213-Hypothetical protein2e+0At4g08691unknown proteinO.I.C.G.H.G.
30.399.70.2Os02g06163009630.m03891-Stem cell self-renewal protein Piwi domaincontaining protein2e-1At1g24388unknown proteinO.I.C.G.H.G.
29.199.75.0Os06g0265400AK109719.1-BZIP transcription factor8e-7At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.C.G.H.G.
29.199.75.0Os12g0145900AK109461.1-Hypothetical protein9e-18At1g09960SUT4 (SUCROSE TRANSPORTER 4)O.I.C.G.H.G.
27.999.619.3Os03g0221500AK103138.1-Glycoside hydrolase, family 17 protein1e-3At2g01630glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeO.I.C.G.H.G.
27.799.68.1Os12g0138500AK060933.1-Ankyrin repeat containing protein6e-1At3g57130BOP1 (BLADE ON PETIOLE 1)O.I.C.G.H.G.
27.699.60.4Os07g0143500AK064714.1-Hypothetical protein7e-1At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)O.I.C.G.H.G.
26.899.62.7Os08g0129600AK102166.1-Conserved hypothetical protein6e-3At4g18570proline-rich family proteinO.I.C.G.H.G.
26.899.60.3Os07g0285700AK108035.1-Cyclin-like F-box domain containing protein8e-1At1g20770unknown proteinO.I.C.G.H.G.
25.399.51.8Os06g0134700AK103589.1-Protein kinase domain containing protein2e-2At2g45340leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
25.399.51.5Os03g0244600AK103524.1-AUX1-like protein4e-71At2g21050amino acid permease, putativeO.I.C.G.H.G.
25.099.526.9Os08g0199400AK105852.1-Fatty acid desaturase, type 2 family protein3e-3At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
24.899.537.3Os06g0256900AK060686.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)9e-26At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
24.799.43.9Os01g0670800AB071291.1-Transcriptional factor B3 family protein1e-3At2g33860ETT (ETTIN)O.I.C.G.H.G.
24.499.44.6Os07g0294001CA760115--4e+0At5g14330unknown proteinO.I.C.G.H.G.
24.099.42.9Os04g0469800AK106528.1-Cytochrome P450 family protein4e+0At5g20190bindingO.I.C.G.H.G.
23.999.41.9Os11g0648700AK106845.1-Hypothetical protein4e+0At2g34850MEE25 (maternal effect embryo arrest 25)O.I.C.G.H.G.
23.799.416.4Os03g0733600AK058575.1-SSXT family protein4e-2At1g01160SSXT protein-related / transcription co-activator-relatedO.I.C.G.H.G.
23.499.423.5Os06g0115700AK073098.1-Conserved hypothetical protein1e-1At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.C.G.H.G.
23.499.412.9Os03g0339700AK073084.1-Plant protein of unknown function DUF827 familyprotein1e-6At3g56270unknown proteinO.I.C.G.H.G.
23.499.43.8Os03g0825600AK121566.1-Conserved hypothetical protein3e+0At5g20430mob1/phocein family proteinO.I.C.G.H.G.
23.499.41.0Os06g0187000AB037135.2-Origin recognition complex 16e-6At4g14700ORC1A (ORIGIN RECOGNITION COMPLEX 1)O.I.C.G.H.G.
23.499.40.6Os03g07690009631.m05457-Protein of unknown function DUF547 domaincontaining protein6e-2At2g23700unknown proteinO.I.C.G.H.G.
23.399.41.4Os02g0492900AK110813.1-Ankyrin-like protein-like protein3e+0Atcg00530-O.I.C.G.H.G.
23.399.41.4Os10g0438500AK103093.1-Cyclin-like F-box domain containing protein3e-3At4g35930-O.I.C.G.H.G.
23.199.35.4Os07g0408500AK103596.1-Rho GTPase activation protein domain containingprotein2e-7At1g08340rac GTPase activating protein, putativeO.I.C.G.H.G.
23.099.33.5Os09g0442700AU166638-SNF2-related domain containing protein8e-1At1g15800unknown proteinO.I.C.G.H.G.
23.099.31.9Os03g0674700AK058659.1--1e-9At4g37740AtGRF2 (GROWTHREGULATING FACTOR 2)O.I.C.G.H.G.
23.099.31.5Os04g0599800AK103675.1-WD-repeat protein-like protein2e-14At4g33260CDC20.2O.I.C.G.H.G.
22.999.312.0Os01g0922100AK110737.1-Hypothetical protein5e-2At3g11820SYP121 (SYNTAXIN OF PLANTS 121)O.I.C.G.H.G.
22.799.311.0Os06g0233800AU197258-Conserved hypothetical protein1e+1Atmg00750-O.I.C.G.H.G.
22.799.30.9Os01g0108800AK102103.1-Plant protein of unknown function DUF936 familyprotein1e+0At4g23670major latex protein-related / MLP-relatedO.I.C.G.H.G.
22.699.34.7Os02g0643200AK106784.1-YABBY protein family protein2e-13At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
22.699.31.6Os08g0438400CB682032-ZF-HD homeobox protein Cys/His-rich dimerisationregion domain containing protein2e-2At1g62760invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
22.499.324.8Os04g0459000AK103526.1-MDR-like ABC transporter2e-13At3g28860ABCB19O.I.C.G.H.G.
22.499.310.6Os02g0645600AK109477.1-Zn-finger, GATA type domain containing protein5e-8At5g66320zinc finger (GATA type) family proteinO.I.C.G.H.G.
22.499.33.1Os09g0395600AK122079.1-Glycoside hydrolase, family 16 domain containingprotein1e-2At1g14720XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2)O.I.C.G.H.G.
22.499.31.2Os02g0469300AK063552.1-ATP-binding region, ATPase-like domain containingprotein2e-8At4g24970ATP-binding region, ATPase-like domain-containing proteinO.I.C.G.H.G.
22.499.30.8Os07g0686100AK110915.1-Abscisic acid responsive elements-binding factor3e-3At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)O.I.C.G.H.G.
22.399.39.0Os03g0809900AK103277.1-Tsunagi1e-1At3g60270uclacyanin, putativeO.I.C.G.H.G.
22.299.30.0Os05g0205100AK111332.1-NLI interacting factor domain containing protein2e-1At3g57390AGL18O.I.C.G.H.G.
22.099.32.3Os01g0166800NM_184521.1-Conserved hypothetical protein4e-9At2g40550ETG1 (E2F TARGET GENE 1)O.I.C.G.H.G.
21.999.326.8Os02g0613900AK069606.1-Adenine phosphoribosyltransferase 2 (EC 2.4.2.7)(APRT)4e-2At1g80050APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)O.I.C.G.H.G.
21.999.37.7Os03g0247300CB096375-Hypothetical protein6e-2At2g35960NHL12O.I.C.G.H.G.
21.899.21.6Os12g0533400CA760433-Rac GTPase activating protein 15e+0At5g25360unknown proteinO.I.C.G.H.G.
21.699.21.8Os01g0758300AK070480.1-Phosphoenolpyruvate carboxylase, housekeepingisozyme (EC 4.1.1.31) (PEPCase)3e-60At1g53310ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1)O.I.C.G.H.G.
21.499.28.0Os01g0917500AB103395.1-Protein kinase domain containing protein2e-6At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)O.I.C.G.H.G.
21.499.21.5Os05g01805009633.m00782-Hypothetical protein2e-1At5g66815unknown proteinO.I.C.G.H.G.
21.399.23.1Os02g0226600AK109849.1-POX domain containing protein3e-4At1g75430BLH11 (BEL1-LIKE HOMEODOMAIN 11)O.I.C.G.H.G.
21.399.22.0Os09g0346900AK069895.1-Conserved hypothetical protein3e+0At4g30970unknown proteinO.I.C.G.H.G.
21.299.26.7Os01g0685900AK064024.1-65kD microtubule associated protein1e-6At5g51600PLE (PLEIADE)O.I.C.G.H.G.
21.199.25.0Os03g0110500AK101157.1-Conserved hypothetical protein2e-1At5g14690unknown proteinO.I.C.G.H.G.
21.199.23.6Os03g0659800AK062366.1-Paired amphipathic helix repeat containing protein1e-7At1g16520unknown proteinO.I.C.G.H.G.
21.099.25.5Os10g0443200AK063397.1-The start codon is not identified.3e-9At2g37020DNA binding / sequence-specific DNA bindingO.I.C.G.H.G.
21.099.22.0Os03g0728500AK101820.1-Forkhead-associated domain containing protein9e-1At4g31360selenium bindingO.I.C.G.H.G.
21.099.21.7Os09g0508200AK064705.1--1e-4At5g41050unknown proteinO.I.C.G.H.G.
20.899.27.3Os05g0455200AK063788.1-Homeodomain protein JUBEL28e-2At2g35940BLH1 (BEL1-LIKE HOMEODOMAIN 1)O.I.C.G.H.G.
20.899.26.6Os04g0504200AK110863.1-Conserved hypothetical protein2e+0At4g02820pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
20.799.29.0Os03g0214100AB111916.1-Replication protein A11e-9At5g61000replication protein, putativeO.I.C.G.H.G.
20.799.21.8Os02g0678800AK108170.1-Transcription activator5e-7At2g36400AtGRF3 (GROWTH-REGULATING FACTOR 3)O.I.C.G.H.G.
20.799.20.7Os06g0256100AK119768.1-Hypothetical protein3e+0At5g04600RNA recognition motif (RRM)-containing proteinO.I.C.G.H.G.
20.699.116.8Os11g0484300AK121422.1-MCM protein 2 family protein5e-87At1g44900ATP binding / DNA binding / DNA-dependent ATPaseO.I.C.G.H.G.
20.399.15.9Os02g08099009630.m05610-Quinonprotein alcohol dehydrogenase-like domaincontaining protein3e-5At4g14310-O.I.C.G.H.G.
20.299.11.8Os02g0708000AK064638.1-Conserved hypothetical protein2e-1At4g12050DNA-binding protein-relatedO.I.C.G.H.G.
20.199.14.4Os07g0182900AK111461.1-Cytosine-5 DNA methyltransferase MET1 (Fragment)1e-36At5g49160MET1 (METHYLTRANSFERASE 1)O.I.C.G.H.G.
20.099.15.1Os02g0776900AF201895.1-Growth-regulating factor 12e-1At2g06200AtGRF6 (GROWTH-REGULATING FACTOR 6)O.I.C.G.H.G.
19.899.11.2Os12g0433500AK102130.1-FUSED serine/threonine kinase5e-32At1g50240-O.I.C.G.H.G.
19.799.11.3Os03g06076009631.m03952-Cyclin9e-3At5g43080CYCA3O.I.C.G.H.G.
19.799.10.5Os01g0226200NM_188558.1-Conserved hypothetical protein4e-2At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.C.G.H.G.
19.699.12.7Os12g0158800AK059233.1-Transcription factor E2F3e-7At2g36010E2F3 (E2F TRANSCRIPTION FACTOR 3)O.I.C.G.H.G.
19.699.10.4Os01g02333009629.m01298-Cyclin4e-1At1g04960-O.I.C.G.H.G.
19.599.10.3Os02g0700100AK102954.1-WD-repeat protein2e-14At4g33270CDC20.1O.I.C.G.H.G.
19.399.02.1Os12g0180900AK110994.1-Hypothetical protein1e-2At1g03600photosystem II family proteinO.I.C.G.H.G.
19.299.07.7Os04g0496300AK062810.1-Conserved hypothetical protein5e-4At5g16250unknown proteinO.I.C.G.H.G.
19.299.07.0Os11g0552100AK064026.1-Protein of unknown function DUF724 family protein3e-2At3g51720unknown proteinO.I.C.G.H.G.
19.299.04.4Os04g0686200AK121864.1-Chromosome condensation regulator protein(Fragment)2e-15At5g42140zinc finger protein, putative / regulator of chromosome condensation (RCC1) family proteinO.I.C.G.H.G.
19.299.02.6Os03g0787200AK103438.1-IQ calmodulin-binding region domain containingprotein2e-11At3g22190IQD5 (IQ-domain 5)O.I.C.G.H.G.
19.199.04.3Os05g0489800AY438639.1-Histone H3.23e-5At4g40040histone H3.2O.I.C.G.H.G.
19.199.01.7Os04g0664400AB071292.1-Auxin response factor 15e-10At1g19850MP (MONOPTEROS)O.I.C.G.H.G.



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