Microarray experiments to specifically-expressed genes

GSM ID GSM409430
Assay name 9311_young panicle 2cm, biological rep1
GSE experiment GSE16265: SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
71.499.99.2Os08g0114200AK106851.1-Endoglucanase 1 precursor (EC 3.2.1.4)(Endo-1,4-beta-glucanase) (Abscission cellulase 1)6e-5At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
52.899.90.8Os02g0645000AK111136.1-Zn-finger, RING domain containing protein8e+0At4g18620-O.I.C.G.H.G.
46.199.92.1Os04g0682400AK072470.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-3At3g26420ATRZ-1AO.I.C.G.H.G.
43.999.914.6Os03g0709100AK061596.1-Basic blue protein (Cusacyanin) (Plantacyanin)(CBP)4e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.C.G.H.G.
43.499.95.6Os01g0726400AY177699.1-Transcription factor, MADS-box domain containingprotein4e-4At5g10140FLC (FLOWERING LOCUS C)O.I.C.G.H.G.
42.599.916.9Os06g0138900AK105368.1-Hypothetical protein7e-1At3g28630-O.I.C.G.H.G.
40.899.98.9Os11g0568300AK064398.1-HMG-I and HMG-Y, DNA-binding domain containingprotein2e-4At4g37110protein binding / zinc ion bindingO.I.C.G.H.G.
39.399.911.4Os03g0416300AK058400.1-COBRA-like protein 2 precursor7e-8At5g60920COB (COBRA)O.I.C.G.H.G.
38.999.811.3Os05g0124000AK105314.1-Ankyrin repeat containing protein4e+0At5g65410HB25 (HOMEOBOX PROTEIN 25)O.I.C.G.H.G.
38.699.824.6Os10g0347000AK073552.1-Conserved hypothetical protein2e-1At1g61900unknown proteinO.I.C.G.H.G.
38.699.810.8Os12g01577009640.m00533-Conserved hypothetical protein6e-1At4g26880stigma-specific Stig1 family proteinO.I.C.G.H.G.
36.399.87.5Os01g0312800AK106887.1-Endo-1,4-beta-glucanase precursor (EC 3.2.1.4)3e-4At1g02800ATCEL2O.I.C.G.H.G.
35.899.822.1Os04g0536300AK070205.1-YABBY protein family protein5e-23At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
35.099.810.3Os12g0138500AK060933.1-Ankyrin repeat containing protein6e-1At3g57130BOP1 (BLADE ON PETIOLE 1)O.I.C.G.H.G.
34.999.86.1Os09g0111100AK103499.1-Cyclin, N-terminal domain containing protein9e-1At5g44570unknown proteinO.I.C.G.H.G.
34.799.84.2Os06g0471100CB632213-Hypothetical protein2e+0At4g08691unknown proteinO.I.C.G.H.G.
33.999.811.3Os12g0636100AK072712.1-TPR-like domain containing protein2e-1At2g36695unknown proteinO.I.C.G.H.G.
33.699.811.8Os02g0797400AK073980.1-MCM protein 5 family protein4e-56At2g07690minichromosome maintenance family protein / MCM family proteinO.I.C.G.H.G.
32.999.85.7Os12g0145900AK109461.1-Hypothetical protein9e-18At1g09960SUT4 (SUCROSE TRANSPORTER 4)O.I.C.G.H.G.
30.699.74.4Os03g06802009631.m04636-TPR-like domain containing protein4e-2At4g27310zinc finger (B-box type) family proteinO.I.C.G.H.G.
30.499.73.6Os07g0129700AF050181.1-OSH15 protein (Homeobox gene)3e-19At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.C.G.H.G.
30.399.79.7Os04g0504200AK110863.1-Conserved hypothetical protein2e+0At4g02820pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
29.699.74.9Os11g0137000AK103181.1-PIN1-like auxin transport protein2e-39At2g01420PIN4 (PIN-FORMED 4)O.I.C.G.H.G.
29.399.744.0Os06g0256900AK060686.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)9e-26At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
29.399.74.1Os09g0395600AK122079.1-Glycoside hydrolase, family 16 domain containingprotein1e-2At1g14720XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2)O.I.C.G.H.G.
28.999.612.4Os02g0733300AK101108.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)1e-15At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
28.899.61.9Os07g0134200AF193835.1-Receptor-like protein kinase 32e-22At5g65700BAM1 (BARELY ANY MERISTEM 1)O.I.C.G.H.G.
28.299.630.3Os08g0199400AK105852.1-Fatty acid desaturase, type 2 family protein3e-3At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
27.899.63.9Os02g0637200AK111101.1-Conserved hypothetical protein1e+0At3g57500unknown proteinO.I.C.G.H.G.
27.499.62.8Os08g0129600AK102166.1-Conserved hypothetical protein6e-3At4g18570proline-rich family proteinO.I.C.G.H.G.
27.399.61.9Os05g01805009633.m00782-Hypothetical protein2e-1At5g66815unknown proteinO.I.C.G.H.G.
27.199.65.2Os07g0294001CA760115--4e+0At5g14330unknown proteinO.I.C.G.H.G.
26.899.60.3Os07g0285700AK108035.1-Cyclin-like F-box domain containing protein8e-1At1g20770unknown proteinO.I.C.G.H.G.
26.699.52.4Os08g0421900AK064578.1-Zn-finger-like, PHD finger domain containingprotein3e-5At4g39100SHL1 (short life)O.I.C.G.H.G.
26.199.54.5Os06g0265400AK109719.1-BZIP transcription factor8e-7At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.C.G.H.G.
25.699.528.3Os04g0459000AK103526.1-MDR-like ABC transporter2e-13At3g28860ABCB19O.I.C.G.H.G.
25.699.512.0Os02g0645600AK109477.1-Zn-finger, GATA type domain containing protein5e-8At5g66320zinc finger (GATA type) family proteinO.I.C.G.H.G.
25.399.51.9Os12g0533400CA760433-Rac GTPase activating protein 15e+0At5g25360unknown proteinO.I.C.G.H.G.
24.899.51.1Os06g0187000AB037135.2-Origin recognition complex 16e-6At4g14700ORC1A (ORIGIN RECOGNITION COMPLEX 1)O.I.C.G.H.G.
24.699.43.2Os05g0412800AA752929-Glutathione S-transferase GST 41 (EC 2.5.1.18)5e+0At2g44578protein binding / zinc ion bindingO.I.C.G.H.G.
24.599.411.8Os06g0233800AU197258-Conserved hypothetical protein1e+1Atmg00750-O.I.C.G.H.G.
24.599.49.9Os03g0809900AK103277.1-Tsunagi1e-1At3g60270uclacyanin, putativeO.I.C.G.H.G.
24.599.45.1Os02g0643200AK106784.1-YABBY protein family protein2e-13At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
24.499.412.3Os01g0133900NM_184266.1-Protein kinase domain containing protein2e-2At2g36570leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
24.299.41.7Os06g0134700AK103589.1-Protein kinase domain containing protein2e-2At2g45340leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
24.099.41.4Os03g0244600AK103524.1-AUX1-like protein4e-71At2g21050amino acid permease, putativeO.I.C.G.H.G.
24.099.40.2Os02g06163009630.m03891-Stem cell self-renewal protein Piwi domaincontaining protein2e-1At1g24388unknown proteinO.I.C.G.H.G.
23.899.423.8Os06g0115700AK073098.1-Conserved hypothetical protein1e-1At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.C.G.H.G.
23.799.40.6Os01g0226200NM_188558.1-Conserved hypothetical protein4e-2At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.C.G.H.G.
23.699.45.4Os04g0686200AK121864.1-Chromosome condensation regulator protein(Fragment)2e-15At5g42140zinc finger protein, putative / regulator of chromosome condensation (RCC1) family proteinO.I.C.G.H.G.
23.599.43.7Os01g0670800AB071291.1-Transcriptional factor B3 family protein1e-3At2g33860ETT (ETTIN)O.I.C.G.H.G.
23.499.412.2Os01g0922100AK110737.1-Hypothetical protein5e-2At3g11820SYP121 (SYNTAXIN OF PLANTS 121)O.I.C.G.H.G.
23.099.315.9Os03g0221500AK103138.1-Glycoside hydrolase, family 17 protein1e-3At2g01630glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeO.I.C.G.H.G.
23.099.38.6Os01g0917500AB103395.1-Protein kinase domain containing protein2e-6At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)O.I.C.G.H.G.
23.099.30.8Os06g0256100AK119768.1-Hypothetical protein3e+0At5g04600RNA recognition motif (RRM)-containing proteinO.I.C.G.H.G.
22.899.315.8Os03g0733600AK058575.1-SSXT family protein4e-2At1g01160SSXT protein-related / transcription co-activator-relatedO.I.C.G.H.G.
22.899.32.3Os02g0830700AK101172.1-Leucine-rich repeat, plant specific containingprotein1e-3At1g10850ATP binding / protein binding / protein kinase/ protein serine/threonine kinaseO.I.C.G.H.G.
22.699.30.6Os03g07690009631.m05457-Protein of unknown function DUF547 domaincontaining protein6e-2At2g23700unknown proteinO.I.C.G.H.G.
22.599.35.3Os07g0408500AK103596.1-Rho GTPase activation protein domain containingprotein2e-7At1g08340rac GTPase activating protein, putativeO.I.C.G.H.G.
22.399.31.8Os09g0508200AK064705.1--1e-4At5g41050unknown proteinO.I.C.G.H.G.
22.299.33.6Os05g0589700AK068031.1-Dual-specific kinase DSK12e-28At3g13690protein kinase family proteinO.I.C.G.H.G.
22.199.36.0Os01g0194200AK073282.1-IQ calmodulin-binding region domain containingprotein8e-1At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.C.G.H.G.
22.199.30.8Os07g0686100AK110915.1-Abscisic acid responsive elements-binding factor3e-3At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)O.I.C.G.H.G.
22.099.35.8Os10g0443200AK063397.1-The start codon is not identified.3e-9At2g37020DNA binding / sequence-specific DNA bindingO.I.C.G.H.G.
22.099.33.6Os03g0825600AK121566.1-Conserved hypothetical protein3e+0At5g20430mob1/phocein family proteinO.I.C.G.H.G.
21.999.30.3Os07g0143500AK064714.1-Hypothetical protein7e-1At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)O.I.C.G.H.G.
21.499.21.5Os08g0438400CB682032-ZF-HD homeobox protein Cys/His-rich dimerisationregion domain containing protein2e-2At1g62760invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
21.399.211.7Os03g0339700AK073084.1-Plant protein of unknown function DUF827 familyprotein1e-6At3g56270unknown proteinO.I.C.G.H.G.
21.299.21.9Os04g0664400AB071292.1-Auxin response factor 15e-10At1g19850MP (MONOPTEROS)O.I.C.G.H.G.
21.199.23.0Os02g0226600AK109849.1-POX domain containing protein3e-4At1g75430BLH11 (BEL1-LIKE HOMEODOMAIN 11)O.I.C.G.H.G.
21.199.22.0Os09g0346900AK069895.1-Conserved hypothetical protein3e+0At4g30970unknown proteinO.I.C.G.H.G.
21.099.22.6Os04g0620200AK060209.1-Remorin, C-terminal region domain containingprotein4e-2At2g02170remorin family proteinO.I.C.G.H.G.
20.899.28.5Os07g0507200AK102722.1-Cloacin family protein4e-4At1g03780targeting protein-relatedO.I.C.G.H.G.
20.799.25.3Os02g0776900AF201895.1-Growth-regulating factor 12e-1At2g06200AtGRF6 (GROWTH-REGULATING FACTOR 6)O.I.C.G.H.G.
20.799.22.9Os12g0158800AK059233.1-Transcription factor E2F3e-7At2g36010E2F3 (E2F TRANSCRIPTION FACTOR 3)O.I.C.G.H.G.
20.699.11.3Os01g0779800AK119965.1-Hypothetical protein4e-2At4g28180unknown proteinO.I.C.G.H.G.
20.399.17.1Os03g0247300CB096375-Hypothetical protein6e-2At2g35960NHL12O.I.C.G.H.G.
20.399.16.4Os01g0685900AK064024.1-65kD microtubule associated protein1e-6At5g51600PLE (PLEIADE)O.I.C.G.H.G.
20.399.16.2Os05g0459400AK073413.1-Kinesin, motor region domain containing protein4e+0At5g37415sequence-specific DNA binding / transcription factorO.I.C.G.H.G.
20.299.13.5Os03g0659800AK062366.1-Paired amphipathic helix repeat containing protein1e-7At1g16520unknown proteinO.I.C.G.H.G.
20.299.12.4Os04g0469800AK106528.1-Cytochrome P450 family protein4e+0At5g20190bindingO.I.C.G.H.G.
20.299.11.4Os04g0645200AK067139.1-VQ domain containing protein2e+0At2g04790unknown proteinO.I.C.G.H.G.
20.199.11.7Os03g0674700AK058659.1--1e-9At4g37740AtGRF2 (GROWTHREGULATING FACTOR 2)O.I.C.G.H.G.
20.199.10.1Os03g03192009631.m02018--6e-1At2g45630oxidoreductase family proteinO.I.C.G.H.G.
19.999.12.7Os03g0787200AK103438.1-IQ calmodulin-binding region domain containingprotein2e-11At3g22190IQD5 (IQ-domain 5)O.I.C.G.H.G.
19.899.12.3Os01g0180400AK108226.1-Protein of unknown function DUF581 family protein3e-2At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.C.G.H.G.
19.899.11.6Os04g0476400AK102076.1-Conserved hypothetical protein5e-6At4g20325unknown proteinO.I.C.G.H.G.
19.799.11.0Os02g0469300AK063552.1-ATP-binding region, ATPase-like domain containingprotein2e-8At4g24970ATP-binding region, ATPase-like domain-containing proteinO.I.C.G.H.G.
19.799.10.3Os01g0596300AK069151.1-Cyclin-like F-box domain containing protein8e-1At2g24020unknown proteinO.I.C.G.H.G.
19.699.17.1Os11g0552100AK064026.1-Protein of unknown function DUF724 family protein3e-2At3g51720unknown proteinO.I.C.G.H.G.
19.699.11.6Os11g0648700AK106845.1-Hypothetical protein4e+0At2g34850MEE25 (maternal effect embryo arrest 25)O.I.C.G.H.G.
19.599.116.0Os11g0484300AK121422.1-MCM protein 2 family protein5e-87At1g44900ATP binding / DNA binding / DNA-dependent ATPaseO.I.C.G.H.G.
19.599.110.0Os04g03957009632.m03097-Conserved hypothetical protein1e-1At2g30560glycine-rich proteinO.I.C.G.H.G.
19.599.11.2Os03g06076009631.m03952-Cyclin9e-3At5g43080CYCA3O.I.C.G.H.G.
19.599.11.1Os12g0433500AK102130.1-FUSED serine/threonine kinase5e-32At1g50240-O.I.C.G.H.G.
19.499.01.3Os04g0599800AK103675.1-WD-repeat protein-like protein2e-14At4g33260CDC20.2O.I.C.G.H.G.
19.299.04.3Os05g0489800AY438639.1-Histone H3.23e-5At4g40040histone H3.2O.I.C.G.H.G.
19.299.02.1Os12g0180900AK110994.1-Hypothetical protein1e-2At1g03600photosystem II family proteinO.I.C.G.H.G.
19.099.04.1Os07g0182900AK111461.1-Cytosine-5 DNA methyltransferase MET1 (Fragment)1e-36At5g49160MET1 (METHYLTRANSFERASE 1)O.I.C.G.H.G.
19.099.02.9Os09g0442700AU166638-SNF2-related domain containing protein8e-1At1g15800unknown proteinO.I.C.G.H.G.



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