Microarray experiments to specifically-expressed genes

GSM ID GSM409429
Assay name Nipponbare_young panicle 2cm, biological rep5
GSE experiment GSE16265: SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
103.1100.01.0Os11g0227300AK064544.1-Conserved hypothetical protein9e-1At3g24690-O.I.C.G.H.G.
53.599.95.2Os12g02089009640.m01003-ZF-HD homeobox protein Cys/His-rich dimerisationregion domain containing protein4e-2At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)O.I.C.G.H.G.
49.199.98.1Os05g0547600AK102181.1-Conserved hypothetical protein2e+0At3g53210nodulin MtN21 family proteinO.I.C.G.H.G.
48.899.90.4Os04g0587900AK108032.1-Hypothetical protein3e+0At5g07230protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
38.399.814.2Os01g0327500AK107756.1-Conserved hypothetical protein1e+0At5g66170-O.I.C.G.H.G.
35.599.835.6Os06g0115700AK073098.1-Conserved hypothetical protein1e-1At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.C.G.H.G.
34.299.817.6Os06g0162800U78890.1-MADS box protein6e-4At1g24260SEP3 (SEPALLATA3)O.I.C.G.H.G.
33.499.80.0Os06g06889009634.m04623--4e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)O.I.C.G.H.G.
32.499.87.7Os03g0110500AK101157.1-Conserved hypothetical protein2e-1At5g14690unknown proteinO.I.C.G.H.G.
32.299.717.0Os06g0219500AK064012.1-Low molecular weight heat shock protein precursor1e-2At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)O.I.C.G.H.G.
31.599.733.8Os08g0199400AK105852.1-Fatty acid desaturase, type 2 family protein3e-3At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
29.899.78.0Os03g0800200D42427-Argonaute protein3e-11At2g27880AGO5 (ARGONAUTE 5)O.I.C.G.H.G.
28.199.61.7Os02g0492900AK110813.1-Ankyrin-like protein-like protein3e+0Atcg00530-O.I.C.G.H.G.
27.199.61.9Os03g0138500AK102410.1-Hypothetical protein5e-2At3g10040transcription factorO.I.C.G.H.G.
26.799.614.7Os03g0727000AK107637.1-Homeobox 208e-16At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.C.G.H.G.
25.999.54.5Os01g0198000AU100840-RNA dependent RNA polymerase family protein1e-1At2g22520unknown proteinO.I.C.G.H.G.
25.999.50.1Os07g02305009635.m01249-Excinuclease ABC, C subunit, N-terminal domaincontaining protein4e-8At2g30350endo/excinuclease amino terminal domain-containing proteinO.I.C.G.H.G.
25.599.511.4Os02g0163400AK121545.1-Conserved hypothetical protein5e+0At4g13160unknown proteinO.I.C.G.H.G.
25.499.57.1Os12g01577009640.m00533-Conserved hypothetical protein6e-1At4g26880stigma-specific Stig1 family proteinO.I.C.G.H.G.
25.299.55.2Os02g0643200AK106784.1-YABBY protein family protein2e-13At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
25.299.52.7Os02g0617100AK062664.1-Conserved hypothetical protein5e-1At5g37770TCH2 (TOUCH 2)O.I.C.G.H.G.
24.999.52.0Os03g0422300AK063543.1-Hypothetical protein4e-1At1g47730F-box family proteinO.I.C.G.H.G.
24.799.42.2Os08g0397800AK108174.1-Conserved hypothetical protein2e+0At3g51200auxin-responsive family proteinO.I.C.G.H.G.
24.699.49.2Os01g0917500AB103395.1-Protein kinase domain containing protein2e-6At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)O.I.C.G.H.G.
24.499.49.7Os06g0138900AK105368.1-Hypothetical protein7e-1At3g28630-O.I.C.G.H.G.
24.299.410.6Os07g01365009635.m00366-Conserved hypothetical protein2e+0At3g06760-O.I.C.G.H.G.
23.899.414.7Os04g0536300AK070205.1-YABBY protein family protein5e-23At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
23.899.413.4Os05g0462700AK105816.1-Histone H4 variant TH0116e-24At5g59690histone H4O.I.C.G.H.G.
23.899.413.4Os08g0101100AK069900.1-HMG1/2 (high mobility group) box family protein3e-2At2g42395unknown proteinO.I.C.G.H.G.
23.899.43.8Os10g0146200AK109913.1-Thaumatin-like protein1e-5At1g20030pathogenesis-related thaumatin family proteinO.I.C.G.H.G.
23.799.41.1Os04g0208500AK106410.1-Cyclin-like F-box domain containing protein4e+0At4g35280zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
23.699.44.1Os12g0145900AK109461.1-Hypothetical protein9e-18At1g09960SUT4 (SUCROSE TRANSPORTER 4)O.I.C.G.H.G.
22.999.31.9Os09g0508200AK064705.1--1e-4At5g41050unknown proteinO.I.C.G.H.G.
22.899.36.6Os03g0416300AK058400.1-COBRA-like protein 2 precursor7e-8At5g60920COB (COBRA)O.I.C.G.H.G.
22.799.35.1Os05g0489800AY438639.1-Histone H3.23e-5At4g40040histone H3.2O.I.C.G.H.G.
22.599.32.7Os01g0963800AK107518.1-Hypothetical protein4e-1At5g44495-O.I.C.G.H.G.
22.099.33.1Os08g0479300AK070025.1-Cyclin, N-terminal domain containing protein9e-1At1g66940protein kinase-relatedO.I.C.G.H.G.
21.699.23.7Os10g0577400AK064295.1-Conserved hypothetical protein2e-1At1g22890unknown proteinO.I.C.G.H.G.
21.499.23.5Os01g0273100AK105320.1-Cyclin-selective ubiquitin carrier protein E2-C3e-5At1g50490UBC20 (ubiquitin-conjugating enzyme 20)O.I.C.G.H.G.
21.299.22.0Os03g0728500AK101820.1-Forkhead-associated domain containing protein9e-1At4g31360selenium bindingO.I.C.G.H.G.
20.999.26.1Os12g0138500AK060933.1-Ankyrin repeat containing protein6e-1At3g57130BOP1 (BLADE ON PETIOLE 1)O.I.C.G.H.G.
20.999.21.1Os03g0165900AK063721.1-MS5-like protein (Fragment)4e-2At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.C.G.H.G.
20.899.217.0Os11g0484300AK121422.1-MCM protein 2 family protein5e-87At1g44900ATP binding / DNA binding / DNA-dependent ATPaseO.I.C.G.H.G.
20.899.23.8Os09g0528000AK060588.1-Kinesin, motor region domain containing protein1e-10At3g51150kinesin motor family proteinO.I.C.G.H.G.
20.899.23.6Os09g0111100AK103499.1-Cyclin, N-terminal domain containing protein9e-1At5g44570unknown proteinO.I.C.G.H.G.
20.599.12.0Os02g0163500AK070929.1-Conserved hypothetical protein2e+0At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)O.I.C.G.H.G.
20.599.10.0Os05g0205100AK111332.1-NLI interacting factor domain containing protein2e-1At3g57390AGL18O.I.C.G.H.G.
20.499.122.5Os05g0223200AK106308.1-Glycine-rich RNA-binding protein GRP2A2e+0At5g50820anac097 (Arabidopsis NAC domain containing protein 97)O.I.C.G.H.G.
20.299.16.7Os12g0636100AK072712.1-TPR-like domain containing protein2e-1At2g36695unknown proteinO.I.C.G.H.G.
20.199.11.4Os04g0645200AK067139.1-VQ domain containing protein2e+0At2g04790unknown proteinO.I.C.G.H.G.
20.099.19.2Os01g0147700AK066686.1-XS zinc finger domain containing protein6e-9At4g00380XH/XS domain-containing protein / XS zinc finger domain-containing proteinO.I.C.G.H.G.
19.899.16.6Os03g0709100AK061596.1-Basic blue protein (Cusacyanin) (Plantacyanin)(CBP)4e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.C.G.H.G.
19.699.110.0Os04g03957009632.m03097-Conserved hypothetical protein1e-1At2g30560glycine-rich proteinO.I.C.G.H.G.
19.699.15.6Os01g0206200AK102840.1--6e-1At4g35900FDO.I.C.G.H.G.
19.299.015.9Os08g0512600D64036.1-Protein cdc2 kinase2e-7At1g76540CDKB2O.I.C.G.H.G.
19.099.011.5Os10g0416200AK073016.1-Naringenin-chalcone synthase family protein1e-3At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)O.I.C.G.H.G.



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