Microarray experiments to specifically-expressed genes

GSM ID GSM409428
Assay name Nipponbare_young panicle 2cm, biological rep4
GSE experiment GSE16265: SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
89.7100.04.9Os03g0165900AK063721.1-MS5-like protein (Fragment)4e-2At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.C.G.H.G.
62.299.96.0Os12g02089009640.m01003-ZF-HD homeobox protein Cys/His-rich dimerisationregion domain containing protein4e-2At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)O.I.C.G.H.G.
61.899.910.7Os01g0198000AU100840-RNA dependent RNA polymerase family protein1e-1At2g22520unknown proteinO.I.C.G.H.G.
51.699.913.9Os03g0800200D42427-Argonaute protein3e-11At2g27880AGO5 (ARGONAUTE 5)O.I.C.G.H.G.
47.399.98.5Os02g05285009630.m03099-Hypothetical protein6e-1At4g15200actin bindingO.I.C.G.H.G.
42.699.915.8Os01g0327500AK107756.1-Conserved hypothetical protein1e+0At5g66170-O.I.C.G.H.G.
39.399.939.5Os06g0115700AK073098.1-Conserved hypothetical protein1e-1At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.C.G.H.G.
37.599.840.3Os08g0199400AK105852.1-Fatty acid desaturase, type 2 family protein3e-3At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
36.799.87.6Os02g0643200AK106784.1-YABBY protein family protein2e-13At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
35.799.81.7Os04g0208500AK106410.1-Cyclin-like F-box domain containing protein4e+0At4g35280zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
35.099.80.2Os08g0414200AK102789.1-BRCT domain containing protein3e-1At4g21860MSRB2 (methionine sulfoxide reductase B 2)O.I.C.G.H.G.
32.799.813.0Os06g0138900AK105368.1-Hypothetical protein7e-1At3g28630-O.I.C.G.H.G.
32.799.81.9Os02g0492900AK110813.1-Ankyrin-like protein-like protein3e+0Atcg00530-O.I.C.G.H.G.
32.399.810.8Os12g0636100AK072712.1-TPR-like domain containing protein2e-1At2g36695unknown proteinO.I.C.G.H.G.
31.699.716.7Os06g0219500AK064012.1-Low molecular weight heat shock protein precursor1e-2At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)O.I.C.G.H.G.
31.599.75.0Os10g0146200AK109913.1-Thaumatin-like protein1e-5At1g20030pathogenesis-related thaumatin family proteinO.I.C.G.H.G.
30.599.74.3Os08g0479300AK070025.1-Cyclin, N-terminal domain containing protein9e-1At1g66940protein kinase-relatedO.I.C.G.H.G.
30.599.71.4Os01g06055009629.m04029-Kinesin, motor region domain containing protein5e-12At1g18550ATP binding / microtubule motorO.I.C.G.H.G.
30.499.70.6Os08g0163100AK064406.1--1e-2At2g27510ATFD3 (ferredoxin 3)O.I.C.G.H.G.
30.499.70.5Os12g0631800AK067318.1-Phytoene dehydrogenase-like9e-14At5g49555amine oxidase-relatedO.I.C.G.H.G.
30.199.75.0Os05g0547600AK102181.1-Conserved hypothetical protein2e+0At3g53210nodulin MtN21 family proteinO.I.C.G.H.G.
30.099.720.7Os03g0221500AK103138.1-Glycoside hydrolase, family 17 protein1e-3At2g01630glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeO.I.C.G.H.G.
30.099.711.2Os01g0917500AB103395.1-Protein kinase domain containing protein2e-6At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)O.I.C.G.H.G.
29.999.718.4Os04g0536300AK070205.1-YABBY protein family protein5e-23At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
29.899.78.7Os03g0416300AK058400.1-COBRA-like protein 2 precursor7e-8At5g60920COB (COBRA)O.I.C.G.H.G.
29.599.73.2Os02g0617100AK062664.1-Conserved hypothetical protein5e-1At5g37770TCH2 (TOUCH 2)O.I.C.G.H.G.
29.099.716.4Os08g0101100AK069900.1-HMG1/2 (high mobility group) box family protein3e-2At2g42395unknown proteinO.I.C.G.H.G.
29.099.70.6Os12g0616000AK106725.1-Kinesin-like protein KIFC31e-3At2g22610kinesin motor protein-relatedO.I.C.G.H.G.
28.799.615.9Os03g0727000AK107637.1-Homeobox 208e-16At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.C.G.H.G.
28.399.614.6Os06g0162800U78890.1-MADS box protein6e-4At1g24260SEP3 (SEPALLATA3)O.I.C.G.H.G.
28.199.62.2Os11g0517400AK100272.1-Hypothetical protein8e-1At3g45920receptor protein kinase-relatedO.I.C.G.H.G.
28.099.61.5Os12g05905009640.m03906-Kinesin-like polypeptides 8 (Fragment)2e-17At3g19050POK2 (PHRAGMOPLAST ORIENTING KINESIN 2)O.I.C.G.H.G.
27.999.62.8Os08g0129600AK102166.1-Conserved hypothetical protein6e-3At4g18570proline-rich family proteinO.I.C.G.H.G.
27.899.624.7Os08g0205900AK103274.1-Aminotransferase-like protein4e-12At3g22200POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)O.I.C.G.H.G.
27.699.60.4Os07g0143500AK064714.1-Hypothetical protein7e-1At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)O.I.C.G.H.G.
27.199.60.2Os04g0587900AK108032.1-Hypothetical protein3e+0At5g07230protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
26.899.60.6Os11g0685200AK119268.1-Conserved hypothetical protein1e+0At1g71310unknown proteinO.I.C.G.H.G.
26.699.52.4Os08g0397800AK108174.1-Conserved hypothetical protein2e+0At3g51200auxin-responsive family proteinO.I.C.G.H.G.
26.699.50.0Os06g06889009634.m04623--4e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)O.I.C.G.H.G.
26.299.57.7Os12g0138500AK060933.1-Ankyrin repeat containing protein6e-1At3g57130BOP1 (BLADE ON PETIOLE 1)O.I.C.G.H.G.
25.999.56.1Os03g0110500AK101157.1-Conserved hypothetical protein2e-1At5g14690unknown proteinO.I.C.G.H.G.
25.299.56.2Os04g0576900AK102667.1-Protein kinase domain containing protein9e-8At1g75640leucine-rich repeat family protein / protein kinase family proteinO.I.C.G.H.G.
25.199.511.5Os01g0147700AK066686.1-XS zinc finger domain containing protein6e-9At4g00380XH/XS domain-containing protein / XS zinc finger domain-containing proteinO.I.C.G.H.G.
25.099.57.9Os09g0556700AK112101.1-Nuclear protein SET domain containing protein9e-1At1g52200unknown proteinO.I.C.G.H.G.
24.999.51.3Os04g03503009632.m02667-Phragmoplast-associated kinesin-related protein 1(Fragment)1e-19At3g23670KINESIN-12BO.I.C.G.H.G.
24.899.51.8Os03g0138500AK102410.1-Hypothetical protein5e-2At3g10040transcription factorO.I.C.G.H.G.
24.499.42.3Os03g0114000AK063381.1-Kinesin-related protein (Fragment)7e-48At2g22610kinesin motor protein-relatedO.I.C.G.H.G.
24.099.41.8Os12g0533400CA760433-Rac GTPase activating protein 15e+0At5g25360unknown proteinO.I.C.G.H.G.
24.099.41.1Os02g07943009630.m05470-Protein of unknown function DUF566 family protein8e-3At5g43160unknown proteinO.I.C.G.H.G.
24.099.40.8Os11g0695900AK101888.1-Importin-beta, N-terminal domain containingprotein5e-1At3g17340binding / protein transporterO.I.C.G.H.G.
24.099.40.5Os07g05121009635.m03225-Ankyrin repeat containing protein1e+0At3g50980XERO1 (DEHYDRIN XERO 1)O.I.C.G.H.G.
23.999.419.5Os11g0484300AK121422.1-MCM protein 2 family protein5e-87At1g44900ATP binding / DNA binding / DNA-dependent ATPaseO.I.C.G.H.G.
23.699.40.3Os01g0182700AY341853.1-WRKY transcription factor 341e-2At2g44745WRKY family transcription factorO.I.C.G.H.G.
23.299.36.2Os02g0810200AK059635.1-Hypothetical protein3e-2At1g16610SR45O.I.C.G.H.G.
23.099.31.6Os04g0375900AK101769.1-Kinesin, motor region domain containing protein5e-3At1g07135glycine-rich proteinO.I.C.G.H.G.
22.999.33.3Os01g0904400AK103514.1-SMC2-11e-29At5g62410SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2)O.I.C.G.H.G.
22.899.31.8Os03g0422300AK063543.1-Hypothetical protein4e-1At1g47730F-box family proteinO.I.C.G.H.G.
22.799.318.8Os08g0512600D64036.1-Protein cdc2 kinase2e-7At1g76540CDKB2O.I.C.G.H.G.
22.599.32.3Os07g0413700AK106540.1-Poly(ADP)-ribose polymerase (EC 2.4.2.30)5e-19At2g31320PARP2 (POLY(ADP-RIBOSE) POLYMERASE 2)O.I.C.G.H.G.
22.599.31.4Os05g0409400AK102597.1-MAP65/ASE1 family protein7e-5At2g38720MAP65-5 (MICROTUBULE-ASSOCIATED PROTEIN 65-5)O.I.C.G.H.G.
22.299.34.3Os05g0497100AK064293.1-Chromosome condensation protein7e-62At5g48600ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3)O.I.C.G.H.G.
22.299.33.8Os12g0145900AK109461.1-Hypothetical protein9e-18At1g09960SUT4 (SUCROSE TRANSPORTER 4)O.I.C.G.H.G.
22.299.32.3Os02g0830700AK101172.1-Leucine-rich repeat, plant specific containingprotein1e-3At1g10850ATP binding / protein binding / protein kinase/ protein serine/threonine kinaseO.I.C.G.H.G.
22.199.36.8Os05g0459400AK073413.1-Kinesin, motor region domain containing protein4e+0At5g37415sequence-specific DNA binding / transcription factorO.I.C.G.H.G.
22.199.31.8Os04g0185100AK119406.1-Conserved hypothetical protein3e-1At1g79070SNARE-associated protein-relatedO.I.C.G.H.G.
22.099.310.0Os02g0699700AK072471.1-DNA topoisomerase II1e-8At3g23890TOPII (TOPOISOMERASE II)O.I.C.G.H.G.
21.899.20.2Os01g0511800AK102912.1-Conserved hypothetical protein3e-2At3g51290proline-rich family proteinO.I.C.G.H.G.
21.699.20.8Os12g0548100AK101059.1-G14587-6 protein (Fragment)2e-10At4g15890bindingO.I.C.G.H.G.
21.499.21.5Os05g01805009633.m00782-Hypothetical protein2e-1At5g66815unknown proteinO.I.C.G.H.G.
21.399.27.1Os03g0709100AK061596.1-Basic blue protein (Cusacyanin) (Plantacyanin)(CBP)4e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.C.G.H.G.
21.299.25.9Os12g01577009640.m00533-Conserved hypothetical protein6e-1At4g26880stigma-specific Stig1 family proteinO.I.C.G.H.G.
21.299.20.0Os12g0573800AK106961.1-Hypothetical protein5e-2At1g04778unknown proteinO.I.C.G.H.G.
21.199.21.0Os01g0177100AK122062.1-Transcriptional corepressor LEUNIG9e-15At4g32551LUG (LEUNIG)O.I.C.G.H.G.
21.099.233.6Os06g0729300AK122176.1-AGO1 homologous protein2e-21At1g48410AGO1 (ARGONAUTE 1)O.I.C.G.H.G.
21.099.23.6Os06g0265400AK109719.1-BZIP transcription factor8e-7At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.C.G.H.G.
20.999.20.8Os03g0243700AK059149.1--3e-6At4g38650glycosyl hydrolase family 10 proteinO.I.C.G.H.G.
20.899.210.9Os01g0922100AK110737.1-Hypothetical protein5e-2At3g11820SYP121 (SYNTAXIN OF PLANTS 121)O.I.C.G.H.G.
20.899.20.2Os10g0153900AK108455.1-Protein kinase domain containing protein2e+0At5g46730glycine-rich proteinO.I.C.G.H.G.
20.799.225.3Os02g0613900AK069606.1-Adenine phosphoribosyltransferase 2 (EC 2.4.2.7)(APRT)4e-2At1g80050APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)O.I.C.G.H.G.
20.799.21.6Os02g0742800AK106279.1-Hypothetical protein3e-4At5g47820FRA1 (FRAGILE FIBER 1)O.I.C.G.H.G.
20.699.10.5Os01g0869300AK059347.1-Hypothetical protein7e-1At4g13270unknown proteinO.I.C.G.H.G.
20.499.19.8Os06g0233800AU197258-Conserved hypothetical protein1e+1Atmg00750-O.I.C.G.H.G.
20.499.10.6Os05g0120900AK121904.1-Conserved hypothetical protein4e-2At3g42800unknown proteinO.I.C.G.H.G.
20.399.10.1Os10g0158700AK106884.1-Conserved hypothetical protein3e+0At1g75590auxin-responsive family proteinO.I.C.G.H.G.
20.299.11.3Os04g0599800AK103675.1-WD-repeat protein-like protein2e-14At4g33260CDC20.2O.I.C.G.H.G.
20.199.116.2Os03g0669100AK063633.1-Deoxyuridine 5'-triphosphate nucleotidohydrolase(EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) (P18)4e-1At5g62900unknown proteinO.I.C.G.H.G.
20.199.11.3Os04g0526000AK064708.1-PCF11e-1At1g11700unknown proteinO.I.C.G.H.G.
20.099.111.9Os04g0553500AK067182.1-Pectinesterase family protein5e-17At5g47500pectinesterase family proteinO.I.C.G.H.G.
20.099.12.9Os02g0226600AK109849.1-POX domain containing protein3e-4At1g75430BLH11 (BEL1-LIKE HOMEODOMAIN 11)O.I.C.G.H.G.
19.999.13.5Os09g0111100AK103499.1-Cyclin, N-terminal domain containing protein9e-1At5g44570unknown proteinO.I.C.G.H.G.
19.999.10.5Os06g0524300AK100666.1-Hypothetical protein1e-4At1g01440extra-large G-protein-relatedO.I.C.G.H.G.
19.899.12.6Os03g0770900AK106660.1-Hypothetical protein1e+0At5g10310unknown proteinO.I.C.G.H.G.
19.899.12.0Os01g0166800NM_184521.1-Conserved hypothetical protein4e-9At2g40550ETG1 (E2F TARGET GENE 1)O.I.C.G.H.G.
19.699.14.3Os12g0289600AK058669.1-Hypothetical protein3e+0At1g12665-O.I.C.G.H.G.
19.699.13.0Os09g0442700AU166638-SNF2-related domain containing protein8e-1At1g15800unknown proteinO.I.C.G.H.G.
19.599.114.7Os12g0572500AK064511.1--3e+0At5g47320RPS19 (RIBOSOMAL PROTEIN S19)O.I.C.G.H.G.
19.599.11.6Os09g0508200AK064705.1--1e-4At5g41050unknown proteinO.I.C.G.H.G.
19.599.10.6Os11g0180600BP184957-Type III restriction enzyme, res subunit familyprotein1e+0At4g16800enoyl-CoA hydratase, putativeO.I.C.G.H.G.
19.399.01.3Os04g0645200AK067139.1-VQ domain containing protein2e+0At2g04790unknown proteinO.I.C.G.H.G.
19.299.021.2Os04g0459000AK103526.1-MDR-like ABC transporter2e-13At3g28860ABCB19O.I.C.G.H.G.



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