Microarray experiments to specifically-expressed genes

GSM ID GSM409422
Assay name Nipponbare_young panicle 2cm, biological rep2
GSE experiment GSE16265: SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
76.999.94.2Os03g0165900AK063721.1-MS5-like protein (Fragment)4e-2At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.C.G.H.G.
56.299.99.8Os01g0198000AU100840-RNA dependent RNA polymerase family protein1e-1At2g22520unknown proteinO.I.C.G.H.G.
50.399.94.9Os12g02089009640.m01003-ZF-HD homeobox protein Cys/His-rich dimerisationregion domain containing protein4e-2At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)O.I.C.G.H.G.
46.199.912.4Os03g0800200D42427-Argonaute protein3e-11At2g27880AGO5 (ARGONAUTE 5)O.I.C.G.H.G.
45.299.916.7Os01g0327500AK107756.1-Conserved hypothetical protein1e+0At5g66170-O.I.C.G.H.G.
35.599.818.7Os06g0219500AK064012.1-Low molecular weight heat shock protein precursor1e-2At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)O.I.C.G.H.G.
34.899.86.3Os02g05285009630.m03099-Hypothetical protein6e-1At4g15200actin bindingO.I.C.G.H.G.
34.199.85.6Os05g0547600AK102181.1-Conserved hypothetical protein2e+0At3g53210nodulin MtN21 family proteinO.I.C.G.H.G.
33.099.835.5Os08g0199400AK105852.1-Fatty acid desaturase, type 2 family protein3e-3At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
32.999.81.6Os04g0208500AK106410.1-Cyclin-like F-box domain containing protein4e+0At4g35280zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
32.799.80.1Os08g0414200AK102789.1-BRCT domain containing protein3e-1At4g21860MSRB2 (methionine sulfoxide reductase B 2)O.I.C.G.H.G.
31.999.70.7Os12g0616000AK106725.1-Kinesin-like protein KIFC31e-3At2g22610kinesin motor protein-relatedO.I.C.G.H.G.
31.299.717.2Os03g0727000AK107637.1-Homeobox 208e-16At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.C.G.H.G.
30.999.79.0Os03g0416300AK058400.1-COBRA-like protein 2 precursor7e-8At5g60920COB (COBRA)O.I.C.G.H.G.
30.899.70.6Os08g0163100AK064406.1--1e-2At2g27510ATFD3 (ferredoxin 3)O.I.C.G.H.G.
30.599.718.8Os04g0536300AK070205.1-YABBY protein family protein5e-23At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
30.399.72.2Os03g0138500AK102410.1-Hypothetical protein5e-2At3g10040transcription factorO.I.C.G.H.G.
29.399.723.9Os11g0484300AK121422.1-MCM protein 2 family protein5e-87At1g44900ATP binding / DNA binding / DNA-dependent ATPaseO.I.C.G.H.G.
28.399.63.1Os02g0617100AK062664.1-Conserved hypothetical protein5e-1At5g37770TCH2 (TOUCH 2)O.I.C.G.H.G.
27.699.69.2Os12g0636100AK072712.1-TPR-like domain containing protein2e-1At2g36695unknown proteinO.I.C.G.H.G.
27.499.619.0Os03g0221500AK103138.1-Glycoside hydrolase, family 17 protein1e-3At2g01630glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeO.I.C.G.H.G.
27.199.69.0Os03g0709100AK061596.1-Basic blue protein (Cusacyanin) (Plantacyanin)(CBP)4e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.C.G.H.G.
26.799.65.5Os02g0643200AK106784.1-YABBY protein family protein2e-13At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
26.499.51.2Os01g06055009629.m04029-Kinesin, motor region domain containing protein5e-12At1g18550ATP binding / microtubule motorO.I.C.G.H.G.
26.199.50.4Os12g0631800AK067318.1-Phytoene dehydrogenase-like9e-14At5g49555amine oxidase-relatedO.I.C.G.H.G.
25.799.54.1Os10g0146200AK109913.1-Thaumatin-like protein1e-5At1g20030pathogenesis-related thaumatin family proteinO.I.C.G.H.G.
25.199.522.3Os08g0205900AK103274.1-Aminotransferase-like protein4e-12At3g22200POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)O.I.C.G.H.G.
25.099.51.5Os02g0492900AK110813.1-Ankyrin-like protein-like protein3e+0Atcg00530-O.I.C.G.H.G.
24.999.59.2Os01g0917500AB103395.1-Protein kinase domain containing protein2e-6At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)O.I.C.G.H.G.
24.699.424.7Os06g0115700AK073098.1-Conserved hypothetical protein1e-1At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.C.G.H.G.
24.499.40.3Os01g0182700AY341853.1-WRKY transcription factor 341e-2At2g44745WRKY family transcription factorO.I.C.G.H.G.
24.299.41.5Os10g0195100NM_195334.1-En/Spm-like transposon proteins family protein4e-2At5g35610paired amphipathic helix repeat-containing proteinO.I.C.G.H.G.
24.299.41.4Os09g0535200AK110145.1-Conserved hypothetical protein5e-1At1g14205ribosomal protein L18 family proteinO.I.C.G.H.G.
23.399.44.0Os12g0145900AK109461.1-Hypothetical protein9e-18At1g09960SUT4 (SUCROSE TRANSPORTER 4)O.I.C.G.H.G.
23.199.32.7Os01g0963800AK107518.1-Hypothetical protein4e-1At5g44495-O.I.C.G.H.G.
22.899.33.2Os02g01877009630.m00863-Myb, DNA-binding domain containing protein4e-1At5g02560HTA12O.I.C.G.H.G.
22.699.37.0Os05g0459400AK073413.1-Kinesin, motor region domain containing protein4e+0At5g37415sequence-specific DNA binding / transcription factorO.I.C.G.H.G.
22.399.31.2Os04g03503009632.m02667-Phragmoplast-associated kinesin-related protein 1(Fragment)1e-19At3g23670KINESIN-12BO.I.C.G.H.G.
22.299.30.6Os05g0120900AK121904.1-Conserved hypothetical protein4e-2At3g42800unknown proteinO.I.C.G.H.G.
22.299.30.2Os01g0511800AK102912.1-Conserved hypothetical protein3e-2At3g51290proline-rich family proteinO.I.C.G.H.G.
21.999.324.2Os04g0459000AK103526.1-MDR-like ABC transporter2e-13At3g28860ABCB19O.I.C.G.H.G.
21.999.35.8Os02g0810200AK059635.1-Hypothetical protein3e-2At1g16610SR45O.I.C.G.H.G.
21.999.30.9Os03g0243700AK059149.1--3e-6At4g38650glycosyl hydrolase family 10 proteinO.I.C.G.H.G.
21.999.30.9Os12g0548100AK101059.1-G14587-6 protein (Fragment)2e-10At4g15890bindingO.I.C.G.H.G.
21.899.26.4Os12g0138500AK060933.1-Ankyrin repeat containing protein6e-1At3g57130BOP1 (BLADE ON PETIOLE 1)O.I.C.G.H.G.
21.899.22.0Os08g0397800AK108174.1-Conserved hypothetical protein2e+0At3g51200auxin-responsive family proteinO.I.C.G.H.G.
21.899.21.7Os02g0742800AK106279.1-Hypothetical protein3e-4At5g47820FRA1 (FRAGILE FIBER 1)O.I.C.G.H.G.
21.799.25.3Os04g0576900AK102667.1-Protein kinase domain containing protein9e-8At1g75640leucine-rich repeat family protein / protein kinase family proteinO.I.C.G.H.G.
21.499.22.8Os08g0114200AK106851.1-Endoglucanase 1 precursor (EC 3.2.1.4)(Endo-1,4-beta-glucanase) (Abscission cellulase 1)6e-5At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
21.499.20.5Os07g05121009635.m03225-Ankyrin repeat containing protein1e+0At3g50980XERO1 (DEHYDRIN XERO 1)O.I.C.G.H.G.
21.399.28.5Os06g0138900AK105368.1-Hypothetical protein7e-1At3g28630-O.I.C.G.H.G.
21.299.23.6Os09g05332009637.m03053-Beta-1,3-glucanase precursor (EC 3.2.1.39)7e+0At5g35603unknown proteinO.I.C.G.H.G.
20.899.28.9Os02g0733300AK101108.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)1e-15At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
20.899.21.5Os05g01805009633.m00782-Hypothetical protein2e-1At5g66815unknown proteinO.I.C.G.H.G.
20.799.210.0Os06g0233800AU197258-Conserved hypothetical protein1e+1Atmg00750-O.I.C.G.H.G.
20.799.25.8Os12g01577009640.m00533-Conserved hypothetical protein6e-1At4g26880stigma-specific Stig1 family proteinO.I.C.G.H.G.
20.799.20.2Os04g0587900AK108032.1-Hypothetical protein3e+0At5g07230protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
20.399.13.5Os09g0111100AK103499.1-Cyclin, N-terminal domain containing protein9e-1At5g44570unknown proteinO.I.C.G.H.G.
20.399.10.5Os11g0685200AK119268.1-Conserved hypothetical protein1e+0At1g71310unknown proteinO.I.C.G.H.G.
20.399.10.2Os07g0535100AK100978.1-F-box protein interaction domain containingprotein3e+0At5g58710ROC7O.I.C.G.H.G.
20.299.11.1Os12g05905009640.m03906-Kinesin-like polypeptides 8 (Fragment)2e-17At3g19050POK2 (PHRAGMOPLAST ORIENTING KINESIN 2)O.I.C.G.H.G.
20.199.111.3Os08g0101100AK069900.1-HMG1/2 (high mobility group) box family protein3e-2At2g42395unknown proteinO.I.C.G.H.G.
20.199.11.5Os12g0533400CA760433-Rac GTPase activating protein 15e+0At5g25360unknown proteinO.I.C.G.H.G.
20.099.11.3Os04g0599800AK103675.1-WD-repeat protein-like protein2e-14At4g33260CDC20.2O.I.C.G.H.G.
19.999.19.2Os01g0147700AK066686.1-XS zinc finger domain containing protein6e-9At4g00380XH/XS domain-containing protein / XS zinc finger domain-containing proteinO.I.C.G.H.G.
19.999.11.4Os04g0645200AK067139.1-VQ domain containing protein2e+0At2g04790unknown proteinO.I.C.G.H.G.
19.899.19.0Os02g0699700AK072471.1-DNA topoisomerase II1e-8At3g23890TOPII (TOPOISOMERASE II)O.I.C.G.H.G.
19.899.14.2Os08g0115200AK100461.1-IQ calmodulin-binding region domain containingprotein2e-1At1g04445zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
19.799.16.3Os04g0504200AK110863.1-Conserved hypothetical protein2e+0At4g02820pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
19.499.01.6Os03g0422300AK063543.1-Hypothetical protein4e-1At1g47730F-box family proteinO.I.C.G.H.G.
19.499.01.1Os12g0433500AK102130.1-FUSED serine/threonine kinase5e-32At1g50240-O.I.C.G.H.G.
19.399.09.9Os06g0162800U78890.1-MADS box protein6e-4At1g24260SEP3 (SEPALLATA3)O.I.C.G.H.G.
19.399.02.7Os08g0479300AK070025.1-Cyclin, N-terminal domain containing protein9e-1At1g66940protein kinase-relatedO.I.C.G.H.G.
19.299.011.5Os04g0553500AK067182.1-Pectinesterase family protein5e-17At5g47500pectinesterase family proteinO.I.C.G.H.G.
19.299.00.3Os07g0143500AK064714.1-Hypothetical protein7e-1At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)O.I.C.G.H.G.
19.099.015.7Os08g0512600D64036.1-Protein cdc2 kinase2e-7At1g76540CDKB2O.I.C.G.H.G.
19.099.010.6Os05g0462700AK105816.1-Histone H4 variant TH0116e-24At5g59690histone H4O.I.C.G.H.G.
19.099.03.7Os02g0574600AK059246.1-Conserved hypothetical protein1e-1At1g35780unknown proteinO.I.C.G.H.G.
19.099.02.8Os01g0904400AK103514.1-SMC2-11e-29At5g62410SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2)O.I.C.G.H.G.



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