Microarray experiments to specifically-expressed genes

GSM ID GSM409421
Assay name Nipponbare_young panicle 2cm, biological rep1
GSE experiment GSE16265: SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
175.4100.01.7Os11g0227300AK064544.1-Conserved hypothetical protein9e-1At3g24690-O.I.C.G.H.G.
57.599.95.6Os12g02089009640.m01003-ZF-HD homeobox protein Cys/His-rich dimerisationregion domain containing protein4e-2At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)O.I.C.G.H.G.
47.599.98.2Os01g0198000AU100840-RNA dependent RNA polymerase family protein1e-1At2g22520unknown proteinO.I.C.G.H.G.
44.199.923.3Os06g0219500AK064012.1-Low molecular weight heat shock protein precursor1e-2At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)O.I.C.G.H.G.
44.199.911.8Os03g0800200D42427-Argonaute protein3e-11At2g27880AGO5 (ARGONAUTE 5)O.I.C.G.H.G.
41.199.915.2Os01g0327500AK107756.1-Conserved hypothetical protein1e+0At5g66170-O.I.C.G.H.G.
40.799.96.7Os05g0547600AK102181.1-Conserved hypothetical protein2e+0At3g53210nodulin MtN21 family proteinO.I.C.G.H.G.
39.599.91.9Os04g0208500AK106410.1-Cyclin-like F-box domain containing protein4e+0At4g35280zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
32.499.826.5Os11g0484300AK121422.1-MCM protein 2 family protein5e-87At1g44900ATP binding / DNA binding / DNA-dependent ATPaseO.I.C.G.H.G.
30.699.70.1Os08g0414200AK102789.1-BRCT domain containing protein3e-1At4g21860MSRB2 (methionine sulfoxide reductase B 2)O.I.C.G.H.G.
30.599.732.8Os08g0199400AK105852.1-Fatty acid desaturase, type 2 family protein3e-3At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
29.999.72.2Os03g0138500AK102410.1-Hypothetical protein5e-2At3g10040transcription factorO.I.C.G.H.G.
29.699.711.0Os01g0917500AB103395.1-Protein kinase domain containing protein2e-6At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)O.I.C.G.H.G.
28.899.628.9Os06g0115700AK073098.1-Conserved hypothetical protein1e-1At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.C.G.H.G.
28.599.68.3Os03g0416300AK058400.1-COBRA-like protein 2 precursor7e-8At5g60920COB (COBRA)O.I.C.G.H.G.
28.199.61.1Os03g0243700AK059149.1--3e-6At4g38650glycosyl hydrolase family 10 proteinO.I.C.G.H.G.
27.799.62.5Os08g0397800AK108174.1-Conserved hypothetical protein2e+0At3g51200auxin-responsive family proteinO.I.C.G.H.G.
27.099.62.9Os05g0407100AK063349.1-Four F5 protein family protein9e-1At5g05430-O.I.C.G.H.G.
26.599.58.8Os03g0709100AK061596.1-Basic blue protein (Cusacyanin) (Plantacyanin)(CBP)4e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.C.G.H.G.
26.199.58.4Os04g0504200AK110863.1-Conserved hypothetical protein2e+0At4g02820pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
25.899.50.0Os06g06889009634.m04623--4e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)O.I.C.G.H.G.
25.799.50.5Os12g0616000AK106725.1-Kinesin-like protein KIFC31e-3At2g22610kinesin motor protein-relatedO.I.C.G.H.G.
25.499.517.5Os03g0221500AK103138.1-Glycoside hydrolase, family 17 protein1e-3At2g01630glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeO.I.C.G.H.G.
25.299.515.3Os10g0416200AK073016.1-Naringenin-chalcone synthase family protein1e-3At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)O.I.C.G.H.G.
24.699.413.6Os03g0727000AK107637.1-Homeobox 208e-16At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.C.G.H.G.
24.599.410.9Os02g0163400AK121545.1-Conserved hypothetical protein5e+0At4g13160unknown proteinO.I.C.G.H.G.
24.499.47.5Os05g0459400AK073413.1-Kinesin, motor region domain containing protein4e+0At5g37415sequence-specific DNA binding / transcription factorO.I.C.G.H.G.
24.399.40.5Os08g0163100AK064406.1--1e-2At2g27510ATFD3 (ferredoxin 3)O.I.C.G.H.G.
24.199.414.9Os04g0536300AK070205.1-YABBY protein family protein5e-23At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
24.099.411.0Os01g0147700AK066686.1-XS zinc finger domain containing protein6e-9At4g00380XH/XS domain-containing protein / XS zinc finger domain-containing proteinO.I.C.G.H.G.
23.899.41.1Os01g06055009629.m04029-Kinesin, motor region domain containing protein5e-12At1g18550ATP binding / microtubule motorO.I.C.G.H.G.
23.299.38.3Os01g0191800AK102360.1-Serine/threonine-protein kinase 12 (EC 2.7.1.37)(Aurora-B) (Fragment)1e-17At2g25880AtAUR2 (AtAurora2)O.I.C.G.H.G.
23.199.39.2Os06g0138900AK105368.1-Hypothetical protein7e-1At3g28630-O.I.C.G.H.G.
22.999.30.5Os07g05121009635.m03225-Ankyrin repeat containing protein1e+0At3g50980XERO1 (DEHYDRIN XERO 1)O.I.C.G.H.G.
22.599.33.6Os10g0146200AK109913.1-Thaumatin-like protein1e-5At1g20030pathogenesis-related thaumatin family proteinO.I.C.G.H.G.
22.599.31.8Os03g0422300AK063543.1-Hypothetical protein4e-1At1g47730F-box family proteinO.I.C.G.H.G.
22.499.32.4Os02g0617100AK062664.1-Conserved hypothetical protein5e-1At5g37770TCH2 (TOUCH 2)O.I.C.G.H.G.
22.399.312.5Os05g0462700AK105816.1-Histone H4 variant TH0116e-24At5g59690histone H4O.I.C.G.H.G.
22.399.311.5Os06g0162800U78890.1-MADS box protein6e-4At1g24260SEP3 (SEPALLATA3)O.I.C.G.H.G.
22.299.37.8Os05g0562300AK067414.1-DnaJ-like protein4e-24At4g28480DNAJ heat shock family proteinO.I.C.G.H.G.
22.299.31.3Os10g0419300AY344488.1-Heat shock factor protein 1 (HSF 1) (Heat shocktranscription factor 1) (HSTF 1)3e-12At5g16820HSF3 (HEAT SHOCK FACTOR 3)O.I.C.G.H.G.
22.099.30.3Os12g0631800AK067318.1-Phytoene dehydrogenase-like9e-14At5g49555amine oxidase-relatedO.I.C.G.H.G.
21.699.27.2Os12g0636100AK072712.1-TPR-like domain containing protein2e-1At2g36695unknown proteinO.I.C.G.H.G.
21.599.21.8Os09g0508200AK064705.1--1e-4At5g41050unknown proteinO.I.C.G.H.G.
21.499.25.7Os02g0810200AK059635.1-Hypothetical protein3e-2At1g16610SR45O.I.C.G.H.G.
21.199.24.4Os02g0643200AK106784.1-YABBY protein family protein2e-13At4g00180YAB3 (YABBY3)O.I.C.G.H.G.
21.099.223.2Os04g0459000AK103526.1-MDR-like ABC transporter2e-13At3g28860ABCB19O.I.C.G.H.G.
21.099.215.6Os07g0543700AK105710.1-Conserved hypothetical protein6e-1At5g38760unknown proteinO.I.C.G.H.G.
20.799.20.8Os12g0548100AK101059.1-G14587-6 protein (Fragment)2e-10At4g15890bindingO.I.C.G.H.G.
20.699.111.6Os08g0101100AK069900.1-HMG1/2 (high mobility group) box family protein3e-2At2g42395unknown proteinO.I.C.G.H.G.
20.499.12.3Os04g0568700CF319209-Heat stress transcription factor Spl7 (Heat shocktranscription factor) (Heat shock factor RHSF10)3e-1At2g27035plastocyanin-like domain-containing proteinO.I.C.G.H.G.
20.299.18.7Os02g0733300AK101108.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)1e-15At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.C.G.H.G.
20.199.18.3Os04g0685200AK060191.1-Peptidase aspartic family protein3e+0At4g30070LCR59 (Low-molecular-weight cysteine-rich 59)O.I.C.G.H.G.
20.099.13.5Os12g0145900AK109461.1-Hypothetical protein9e-18At1g09960SUT4 (SUCROSE TRANSPORTER 4)O.I.C.G.H.G.
19.999.12.4Os01g0963800AK107518.1-Hypothetical protein4e-1At5g44495-O.I.C.G.H.G.
19.899.121.8Os05g0223200AK106308.1-Glycine-rich RNA-binding protein GRP2A2e+0At5g50820anac097 (Arabidopsis NAC domain containing protein 97)O.I.C.G.H.G.
19.899.11.0Os04g03503009632.m02667-Phragmoplast-associated kinesin-related protein 1(Fragment)1e-19At3g23670KINESIN-12BO.I.C.G.H.G.
19.799.116.3Os08g0512600D64036.1-Protein cdc2 kinase2e-7At1g76540CDKB2O.I.C.G.H.G.
19.699.11.2Os10g0195100NM_195334.1-En/Spm-like transposon proteins family protein4e-2At5g35610paired amphipathic helix repeat-containing proteinO.I.C.G.H.G.
19.599.14.1Os08g0115200AK100461.1-IQ calmodulin-binding region domain containingprotein2e-1At1g04445zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
19.599.10.1Os10g0153900AK108455.1-Protein kinase domain containing protein2e+0At5g46730glycine-rich proteinO.I.C.G.H.G.
19.499.012.3Os01g0317800AK105905.1-Alpha/beta hydrolase family protein2e-4At5g14980esterase/lipase/thioesterase family proteinO.I.C.G.H.G.
19.199.00.2Os04g0587900AK108032.1-Hypothetical protein3e+0At5g07230protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
19.099.01.2Os01g0779800AK119965.1-Hypothetical protein4e-2At4g28180unknown proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage