Microarray experiments to specifically-expressed genes

GSM ID GSM38668
Assay name NSNP
GSE experiment GSE2268: Arabidopsis polysome microarray

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
683.0100.097.7At2g291603768464-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
279.7100.0186.8At5g15360831388unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
195.1100.095.0At5g44530834480subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BOPFAMO.I.C.G.H.G.
144.899.960.5At5g28030832873cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putativeF:pyridoxal phosphate binding, cysteine synthase activity, catalytic activity;P:cysteine biosynthetic process from serine, cysteine biosynthetic process, metabolic process;C:unknown;BOFPMAO.I.C.G.H.G.
126.199.984.0At3g56080824774dehydration-responsive protein-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFO.I.C.G.H.G.
122.499.9114.4At1g13650837926-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAO.I.C.G.H.G.
106.699.969.9At3g05340819698pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFO.I.C.G.H.G.
104.399.947.7At5g37130833685bindingF:binding;P:biological_process unknown;C:apoplast;OBAMFPO.I.C.G.H.G.
75.199.952.1At1g28610839761GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBMO.I.C.G.H.G.
74.499.9194.1At1g26920839582unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
70.899.963.0At3g62750825450BGLU8 (BETA GLUCOSIDASE 8)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:vacuole;BOPMFAO.I.C.G.H.G.
69.499.977.3At1g76110843943high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing proteinF:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus;MOFPO.I.C.G.H.G.
67.099.832.2At5g67390836875unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
64.099.8115.9At4g38860830041auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
60.399.891.6At2g28550817403RAP2.7 (RELATED TO AP2.7)F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent, vegetative to reproductive phase transition;C:nucleus;POBVO.I.C.G.H.G.
59.999.8211.0At3g54500824615-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.C.G.H.G.
53.899.874.1At5g27730832835unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMPO.I.C.G.H.G.
52.999.820.5At5g11590831031TINY2 (TINY2)encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.O.I.C.G.H.G.
52.699.874.5At4g27820828895BGLU9 (BETA GLUCOSIDASE 9)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:peroxisome;BOPMFAO.I.C.G.H.G.
50.699.829.5At2g29090817457CYP707A2Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition.O.I.C.G.H.G.
50.499.819.9At4g16920827400disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVAO.I.C.G.H.G.
46.899.8119.3At5g61420836263MYB28 (myb domain protein 28)Encodes a nuclear localized member of the MYB transcription factor family. Involved in positive regulation of aliphatic glucosinolate biosynthesis.Expression is induced by touch, wounding and glucose.O.I.C.G.H.G.
44.299.873.2At2g07739815412-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
42.999.879.3At2g29360817485tropinone reductase, putative / tropine dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
42.999.860.4At1g53510841786ATMPK18member of MAP KinaseO.I.C.G.H.G.
42.899.887.8At1g22430838849alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAVO.I.C.G.H.G.
41.899.859.8At4g18975827633pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
40.399.838.6At5g60940836215transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFBOPAO.I.C.G.H.G.
40.099.868.1At2g44940819103AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.O.I.C.G.H.G.
39.499.8125.4At1g50290841451unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:cytosol;PO.I.C.G.H.G.
39.499.825.1At2g39250818510SNZ (SCHNARCHZAPFEN)Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene, SCHLAFMUTZE (SMZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.O.I.C.G.H.G.
38.999.8116.7At5g26820832740ATIREG3 (IRON-REGULATED PROTEIN 3)F:unknown;P:unknown;C:membrane;MPFOBO.I.C.G.H.G.
38.699.8190.3At1g68490843178unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
38.399.858.7At2g35820818155unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOO.I.C.G.H.G.
38.399.835.6At5g53200835401TRY (TRIPTYCHON)F:transcription factor activity, DNA binding;P:trichome branching, regulation of transcription;C:unknown;POMO.I.C.G.H.G.
38.199.838.3At2g37840818361protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOFBVAO.I.C.G.H.G.
37.299.742.3At3g01210821275nucleic acid binding / oxidoreductaseF:oxidoreductase activity, nucleic acid binding;P:oxidation reduction;C:cellular_component unknown;PFOMO.I.C.G.H.G.
36.899.731.5At4g17360827448formyltetrahydrofolate deformylase/ hydroxymethyl-, formyl- and related transferase/ methyltransferaseencodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle.O.I.C.G.H.G.
36.699.7177.3At1g02820839304late embryogenesis abundant 3 family protein / LEA3 family proteinF:molecular_function unknown;P:embryonic development, response to stress;C:unknown;PO.I.C.G.H.G.
36.099.783.2At4g18390827568TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;POMFBO.I.C.G.H.G.
35.799.711.0At4g04900825829RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10)encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.O.I.C.G.H.G.
35.699.791.7At4g26480828754KH domain-containing proteinF:nicotianamine synthase activity, RNA binding, nucleic acid binding;P:nicotianamine biosynthetic process;C:cellular_component unknown;MPFOBO.I.C.G.H.G.
35.199.733.3At5g06440830532unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POFMBO.I.C.G.H.G.
33.699.791.1At4g12970826909unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
31.899.7180.1At1g72030843534GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:unknown;PBOO.I.C.G.H.G.
30.599.723.6At5g48090834861ELP1 (EDM2-LIKE PROTEIN1)F:unknown;P:unknown;C:cellular_component unknown;MPOO.I.C.G.H.G.
28.999.738.6At2g39950818582unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBO.I.C.G.H.G.
27.799.758.9At3g01860820070unknown proteinF:molecular_function unknown;P:response to cadmium ion;C:chloroplast;PMO.I.C.G.H.G.
27.699.751.7At5g08430830742SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing proteinF:DNA binding;P:histone modification, transcription initiation;C:nucleus;PMOFO.I.C.G.H.G.
27.399.7102.9At5g47390834786myb family transcription factorF:transcription factor activity, DNA binding;P:in 8 processes;C:unknown;POFMO.I.C.G.H.G.
26.999.78.7At2g04440814984NUDIX/mutT hydrolase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;PMOBO.I.C.G.H.G.
26.799.751.2At1g32520840146unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPOO.I.C.G.H.G.
26.799.739.1At3g03770821164leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
26.699.76.9At1g77780844115glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFOO.I.C.G.H.G.
26.299.779.7At2g45950819203ASK20 (ARABIDOPSIS SKP1-LIKE 20)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:SCF ubiquitin ligase complex;MPOFBVO.I.C.G.H.G.
26.299.720.5At3g29130822561unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOO.I.C.G.H.G.
25.199.685.7At5g17670831633hydrolase, acting on ester bondsF:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:chloroplast, chloroplast envelope;BOPO.I.C.G.H.G.
25.199.632.6At4g19240827664unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.099.650.8At3g18500821380-F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOBO.I.C.G.H.G.
25.099.69.7At1g11880837736transferase, transferring hexosyl groupsF:transferase activity, transferring hexosyl groups;P:GPI anchor biosynthetic process;C:integral to membrane, endoplasmic reticulum membrane;MFBOPAO.I.C.G.H.G.
24.699.627.9At1g77850844120ARF17 (AUXIN RESPONSE FACTOR 17)Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.O.I.C.G.H.G.
24.699.610.0At2g39240818509RNA polymerase I transcription factor/ bindingF:RNA polymerase I transcription factor activity, binding;P:unknown;C:unknown;MFPOO.I.C.G.H.G.
24.299.646.8At5g59350836054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
24.299.617.6At5g06710830560HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)Homeobox-leucine zipper protein.O.I.C.G.H.G.
24.199.6350.7At5g20700832193senescence-associated protein-relatedF:unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
23.999.647.3At1g76570843990chlorophyll A-B binding family proteinF:chlorophyll binding;P:response to blue light, response to far red light, photosynthesis;C:light-harvesting complex, chloroplast, membrane;POMO.I.C.G.H.G.
23.899.618.2At1g78440844180ATGA2OX1 (gibberellin 2-oxidase 1)Encodes a gibberellin 2-oxidase.O.I.C.G.H.G.
23.799.626.8At2g29300817479tropinone reductase, putative / tropine dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
23.799.620.8At3g06520819830agenet domain-containing proteinF:RNA binding;P:unknown;C:cellular_component unknown;POO.I.C.G.H.G.
23.599.629.6At4g24810828584ABC1 family proteinsimilar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147)O.I.C.G.H.G.
23.299.6113.7At1g60550842350ECHID (ENOYL-COA HYDRATASE/ISOMERASE D)F:naphthoate synthase activity, catalytic activity;P:vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process;C:peroxisome;BOMFPAO.I.C.G.H.G.
23.299.633.6At2g07721815394unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
22.999.682.7At5g02810831793PRR7 (PSEUDO-RESPONSE REGULATOR 7)PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels.O.I.C.G.H.G.
22.899.646.2At4g27050828813F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
22.799.627.2At2g04790815022unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POO.I.C.G.H.G.
22.399.622.5At2g04270814965RNEE/G (RNASE E/G-LIKE)Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.O.I.C.G.H.G.
22.299.678.0At1g62250842522unknown proteinF:unknown;P:unknown;C:chloroplast;PO.I.C.G.H.G.
21.999.615.4At1g56670842122GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
21.899.664.7At3g14720820700ATMPK19member of MAP KinaseO.I.C.G.H.G.
21.799.664.3At3g02830821230ZFN1 (ZINC FINGER PROTEIN 1)Encodes a zinc finger protein.O.I.C.G.H.G.
21.799.658.9At4g31870829316ATGPX7 (glutathione peroxidase 7)Encodes glutathione peroxidase.O.I.C.G.H.G.
21.599.6145.8At2g36870818259xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, cell wall, apoplast;PFBOAO.I.C.G.H.G.
21.499.660.4At2g38610818443KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
21.499.616.3At1g10110837548F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
21.299.684.5At5g11790831051Ndr family proteinF:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MPOBO.I.C.G.H.G.
21.299.668.4At1g12860837843SCRM2 (SCREAM 2)Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation.O.I.C.G.H.G.
21.099.645.4At1g71810843511ABC1 family proteinF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast, plastoglobule;OBMPFAVO.I.C.G.H.G.
20.999.673.5At5g23610832427-F:unknown;P:biological_process unknown;C:unknown;POBFAMO.I.C.G.H.G.
20.999.626.6At5g38140833794NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFOO.I.C.G.H.G.
20.899.628.2At5g20220832144zinc knuckle (CCHC-type) family proteinF:unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding;P:protein folding;C:unknown;VMFOPBO.I.C.G.H.G.
20.799.613.3At1g59980842292ARL2 (ARG1-LIKE 2)F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
20.499.6143.0At4g25700828675BETA-OHASE 1 (BETA-HYDROXYLASE 1)Converts beta-carotene to zeaxanthin via cryptoxanthin.O.I.C.G.H.G.
20.499.646.9At3g05030819665NHX2 (SODIUM HYDROGEN EXCHANGER 2)member of Sodium proton exchanger familyO.I.C.G.H.G.
20.499.643.7At3g61550825328zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
20.399.680.8At3g26000822197F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
20.299.617.3At2g22810816812ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4)key regulatory enzyme in the biosynthesis of the plant hormone ethylene. ACS4 is specifically induced by indoleacetic acid (IAA).O.I.C.G.H.G.
20.099.618.1At1g03055838334unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOO.I.C.G.H.G.
19.999.6229.4At4g02920828139unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
19.999.66.0At1g47780841190acyl-protein thioesterase-relatedF:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MBPOFO.I.C.G.H.G.
19.899.666.8At1g32540840148LOL1 (LSD ONE LIKE 1)Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.O.I.C.G.H.G.



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