Microarray experiments to specifically-expressed genes

GSM ID	GSM385709
Assay name	Deep-sowing 10d treatment TIBA, biological rep1
GSE experiment	GSE15371: Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
112.7	100.0	3.2	Zm.9126.1.A1_at	BM339245	hypothetical protein LOC100191789	-	2e+0	At5g39800	60S ribosomal protein-related	O.I.	C.G.	H.G.	Please select
93.6	100.0	18.8	Zm.503.1.A1_at	CK827179	germin-like protein 2	-	1e-1	At1g77750	30S ribosomal protein S13, chloroplast, putative	O.I.	C.G.	H.G.	Please select
87.6	100.0	4.6	Zm.6689.1.A1_s_at	BM381797	hypothetical protein LOC100272379	-	2e+1	At5g55125	unknown protein	O.I.	C.G.	H.G.	Please select
71.7	100.0	1.7	Zm.9845.1.S1_at	BM379918	hypothetical protein LOC100272820	-	6e-3	At4g33730	pathogenesis-related protein, putative	O.I.	C.G.	H.G.	Please select
65.2	100.0	0.6	Zm.8610.1.A1_at	BM333891	carbonyl reductase 1	-	6e+0	At5g62290	nucleotide-sensitive chloride conductance regulator (ICln) family protein	O.I.	C.G.	H.G.	Please select
58.4	100.0	3.3	Zm.15533.1.S1_at	CN845512	cytokinin-O-glucosyltransferase 2	-	2e-1	At4g15940	fumarylacetoacetate hydrolase family protein	O.I.	C.G.	H.G.	Please select
55.5	100.0	25.4	Zm.1090.3.A1_a_at	AI714811	-	-	3e+0	At4g12990	unknown protein	O.I.	C.G.	H.G.	Please select
54.9	100.0	18.4	Zm.12518.1.A1_at	CA452751	hypothetical protein LOC100191976	-	4e-1	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	O.I.	C.G.	H.G.	Please select
52.2	100.0	5.2	Zm.556.1.S1_x_at	AF244696.1	glutathione transferase31	-	6e-4	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.	Please select
50.7	100.0	7.5	Zm.7654.1.A1_at	BG874072	erg28 like protein	-	2e+0	At2g02490	unknown protein	O.I.	C.G.	H.G.	Please select
48.4	100.0	3.5	Zm.2136.1.S1_at	AW282383	hypothetical protein LOC100192761	-	5e-5	At1g44970	peroxidase, putative	O.I.	C.G.	H.G.	Please select
48.2	100.0	0.0	Zm.9599.1.A1_at	BM333574	-	-	2e-1	At1g27330	-	O.I.	C.G.	H.G.	Please select
46.9	100.0	0.2	Zm.539.1.A1_at	AF244673.1	Glutathione S-transferase 8	-	1e-1	At5g52550	unknown protein	O.I.	C.G.	H.G.	Please select
46.3	100.0	15.9	Zm.17728.1.A1_at	CF631523	-	-	1e+0	At3g25573	unknown protein	O.I.	C.G.	H.G.	Please select
46.1	100.0	5.1	Zm.9486.1.A1_at	CK347877	CHY1	-	1e-18	At2g30660	3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative	O.I.	C.G.	H.G.	Please select
46.1	100.0	1.3	Zm.5725.1.A1_at	CK986059	In2-1 protein	-	1e+1	At5g66090	unknown protein	O.I.	C.G.	H.G.	Please select
45.8	100.0	16.6	Zm.2331.1.S1_x_at	AY106132.1	protein induced upon tuberization	-	2e+0	At3g44718	-	O.I.	C.G.	H.G.	Please select
42.6	99.9	11.5	Zm.14951.3.S1_x_at	BQ048061	-	-	6e-1	At5g66370	unknown protein	O.I.	C.G.	H.G.	Please select
42.6	99.9	0.7	Zm.12612.1.A1_at	BU050513	-	-	6e-1	At1g23260	MMZ1 (MMS ZWEI HOMOLOGUE 1)	O.I.	C.G.	H.G.	Please select
41.8	99.9	0.1	Zm.9101.1.A1_at	BM348554	hypothetical protein LOC100279567	-	2e+0	At5g11990	proline-rich family protein	O.I.	C.G.	H.G.	Please select
40.8	99.9	3.6	Zm.556.1.S1_a_at	AF244696.1	glutathione transferase31	-	6e-4	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.	Please select
40.1	99.9	22.7	Zm.17087.1.S1_at	BM267086	nonspecific lipid-transfer protein	-	1e+1	At3g10915	reticulon family protein	O.I.	C.G.	H.G.	Please select
39.2	99.9	2.0	Zm.2301.1.A1_at	BM334264	O-methyltransferase ZRP4	-	1e-3	At4g35150	O-methyltransferase family 2 protein	O.I.	C.G.	H.G.	Please select
38.9	99.9	2.8	Zm.5882.1.A1_at	AI637237	-	-	2e-1	At1g52880	NAM (NO APICAL MERISTEM)	O.I.	C.G.	H.G.	Please select
37.2	99.9	1.4	Zm.7583.1.A1_at	BM339440	-	-	2e+1	At5g57181	unknown protein	O.I.	C.G.	H.G.	Please select
36.4	99.9	1.2	Zm.9932.1.A1_at	CF005271	hypothetical protein LOC100278059	-	3e-1	At1g76240	unknown protein	O.I.	C.G.	H.G.	Please select
35.7	99.9	0.4	Zm.10586.1.A1_at	BQ538465	hypothetical protein LOC100191582	-	5e-2	At3g51100	unknown protein	O.I.	C.G.	H.G.	Please select
35.2	99.9	25.1	Zm.186.1.S1_at	X71396.1	Bowman-Birk type wound-induced proteinase inhibitor WIP1	-	1e+0	At1g20000	TAF11b (TBP-ASSOCIATED FACTOR 11b)	O.I.	C.G.	H.G.	Please select
34.7	99.9	3.2	Zm.15827.1.A1_at	CK370003	hypothetical protein LOC100275282	-	6e+0	At5g66120	3-dehydroquinate synthase, putative	O.I.	C.G.	H.G.	Please select
34.6	99.9	41.9	Zm.847.1.S1_at	L00973.1	hypothetical protein LOC100274400	-	1e-1	At1g02360	chitinase, putative	O.I.	C.G.	H.G.	Please select
34.5	99.9	2.2	Zm.556.2.A1_a_at	BM380003	glutathione transferase31	-	6e-4	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.	Please select
34.5	99.9	1.3	Zm.4682.1.S1_at	AI737946	acyl-desaturase	-	1e-1	At5g16230	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	O.I.	C.G.	H.G.	Please select
34.3	99.9	22.9	Zm.17839.1.S1_at	U12679.1	glutathione S-transferase2	-	1e-1	At4g02520	ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)	O.I.	C.G.	H.G.	Please select
34.1	99.9	24.1	Zm.3818.1.S1_at	CF034965	-	-	2e-1	At1g77570	DNA binding / transcription factor	O.I.	C.G.	H.G.	Please select
33.0	99.8	0.5	Zm.10304.1.S1_at	BM895485	-	-	6e+0	At3g46660	UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12)	O.I.	C.G.	H.G.	Please select
32.9	99.8	0.1	Zm.5748.1.A1_at	AI649420	hypothetical protein LOC100278320	-	8e-8	At5g16960	NADP-dependent oxidoreductase, putative	O.I.	C.G.	H.G.	Please select
30.9	99.8	14.8	Zm.7159.1.A1_at	CF972430	hypothetical protein LOC100276523	-	1e+0	At3g04770	RPSAb (40S ribosomal protein SA B)	O.I.	C.G.	H.G.	Please select
30.7	99.8	5.1	Zm.1323.1.S1_x_at	AY107806.1	hypothetical protein LOC100275312	-	6e+0	At3g30840	unknown protein	O.I.	C.G.	H.G.	Please select
30.5	99.8	3.9	Zm.1323.1.S1_at	AY107806.1	hypothetical protein LOC100275312	-	6e+0	At3g30840	unknown protein	O.I.	C.G.	H.G.	Please select
30.0	99.8	4.9	Zm.299.1.S1_a_at	L35914.1	malate synthase1	-	3e-16	At5g03860	MLS (MALATE SYNTHASE)	O.I.	C.G.	H.G.	Please select
29.7	99.8	17.2	Zm.1444.1.A1_at	BG319690	ATPase inhibitor /// ATPase inhibitor	-	9e-2	At4g18620	-	O.I.	C.G.	H.G.	Please select
28.1	99.7	44.6	Zm.14951.2.S1_x_at	BG837389	-	-	9e-3	At2g30370	allergen-related	O.I.	C.G.	H.G.	Please select
28.0	99.7	0.1	Zm.10129.1.A1_at	BM267811	N-acetyltransferase	-	2e+1	At5g57750	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
27.9	99.7	0.8	Zm.549.1.A1_at	AF244686.1	glutathione S-transferase GST 21	-	2e+0	At2g09840	-	O.I.	C.G.	H.G.	Please select
27.8	99.7	0.5	Zm.562.1.A1_at	AF244702.1	glutathione transferase37	-	8e+0	At2g42590	GRF9 (GENERAL REGULATORY FACTOR 9)	O.I.	C.G.	H.G.	Please select
27.5	99.7	42.6	Zm.14951.1.S1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	O.I.	C.G.	H.G.	Please select
26.7	99.7	3.0	Zm.6344.1.A1_at	CK787177	-	-	6e+0	At4g14251	unknown protein	O.I.	C.G.	H.G.	Please select
26.6	99.7	17.2	Zm.375.1.S1_at	AF057184.1	trypsin inhibitor	-	1e-1	At5g02440	unknown protein	O.I.	C.G.	H.G.	Please select
26.3	99.7	5.1	Zm.2807.1.A1_at	BM334793	zinc-finger protein 1	-	7e-1	At5g57345	unknown protein	O.I.	C.G.	H.G.	Please select
26.1	99.6	1.5	Zm.3216.1.S1_at	AJ006537	limonoid UDP-glucosyltransferase	-	1e-1	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	O.I.	C.G.	H.G.	Please select
25.9	99.6	1.3	Zm.10267.1.A1_at	BM660593	-	-	8e-2	At1g04445	zinc finger (C2H2 type) family protein	O.I.	C.G.	H.G.	Please select
25.9	99.6	0.9	Zm.19027.1.A1_at	CK347987	hypothetical protein LOC100274392	-	4e-1	At4g22310	unknown protein	O.I.	C.G.	H.G.	Please select
25.4	99.6	6.3	Zm.10175.1.A1_at	BM379420	hypothetical protein LOC100279966 /// pathogenesis-related protein 10	-	7e+0	At4g18692	unknown protein	O.I.	C.G.	H.G.	Please select
25.1	99.6	6.1	Zm.17267.1.S1_at	CK368940	hypothetical protein LOC100275082	-	5e-1	At1g80920	J8	O.I.	C.G.	H.G.	Please select
24.7	99.6	27.2	Zm.10167.1.A1_at	BM381529	hypothetical protein LOC100274618 /// hypothetical protein LOC100275328	-	3e-1	At1g58420	-	O.I.	C.G.	H.G.	Please select
24.3	99.6	0.8	Zm.14951.1.S1_x_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	O.I.	C.G.	H.G.	Please select
24.2	99.6	5.8	Zm.2847.1.A1_at	AY110962.1	dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex	-	2e+0	At5g08055	-	O.I.	C.G.	H.G.	Please select
24.0	99.5	0.8	ZmAffx.752.1.A1_at	AI712129	dihydroflavonol-4-reductase	-	1e+1	At4g02770	PSAD-1 (photosystem I subunit D-1)	O.I.	C.G.	H.G.	Please select
23.6	99.5	1.7	Zm.4432.1.A1_at	CF626711	hypothetical protein LOC100274260	-	4e+0	At2g20570	GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1)	O.I.	C.G.	H.G.	Please select
23.5	99.5	0.0	Zm.10098.1.A1_at	CO531187	hypothetical protein LOC100272958	-	2e-2	At2g44060	late embryogenesis abundant family protein / LEA family protein	O.I.	C.G.	H.G.	Please select
22.7	99.5	1.2	Zm.556.2.A1_x_at	BM380003	glutathione transferase31	-	6e-4	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.	Please select
22.3	99.5	3.1	Zm.4160.1.A1_at	CF243936	indole-3-acetate beta-glucosyltransferase	-	1e-2	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	O.I.	C.G.	H.G.	Please select
22.2	99.4	0.3	Zm.555.1.S1_at	AF244694.1	glutathione S-transferase GST 29	-	2e+0	At5g55507	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	H.G.	Please select
21.9	99.4	15.3	Zm.4270.2.A1_a_at	CF628998	Bowman-Birk serine protease inhibitor-like	-	2e-2	At4g26020	-	O.I.	C.G.	H.G.	Please select
21.5	99.4	0.1	Zm.11612.1.A1_at	CF634224	-	-	3e-1	At1g06135	unknown protein	O.I.	C.G.	H.G.	Please select
21.4	99.4	4.6	Zm.3371.1.A1_at	BM080684	-	-	5e-2	At4g35150	O-methyltransferase family 2 protein	O.I.	C.G.	H.G.	Please select
21.4	99.4	0.2	Zm.7057.1.A1_at	BM078889	-	-	1e-2	At1g68020	ATTPS6	O.I.	C.G.	H.G.	Please select
21.1	99.4	3.5	Zm.18116.1.S1_at	CN844693	SNF1-related protein kinase regulatory subunit beta-1	-	4e-1	At4g24930	thylakoid lumenal 17.9 kDa protein, chloroplast	O.I.	C.G.	H.G.	Please select
20.9	99.4	0.8	Zm.9297.1.A1_at	CD998185	hypothetical protein LOC100275777	-	1e+0	At1g47770	beta-galactosidase	O.I.	C.G.	H.G.	Please select
20.4	99.3	0.5	Zm.9368.1.A1_at	BM268763	-	-	1e+0	At5g06650	GIS2 (GLABROUS INFLORESCENCE STEMS 2)	O.I.	C.G.	H.G.	Please select
20.3	99.3	0.8	Zm.8365.1.A1_at	BM380097	hexokinase-1	-	7e+0	At4g25200	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	O.I.	C.G.	H.G.	Please select
20.1	99.3	6.9	Zm.17948.1.A1_at	CF630514	-	-	2e-2	At3g24570	peroxisomal membrane 22 kDa family protein	O.I.	C.G.	H.G.	Please select
20.1	99.3	0.6	Zm.10333.1.A1_at	CF005301	hypothetical protein LOC100279061	-	7e+0	At4g15460	glycine-rich protein	O.I.	C.G.	H.G.	Please select
20.0	99.3	0.8	Zm.17192.1.A1_at	BM339467	-	-	5e+0	At2g22520	unknown protein	O.I.	C.G.	H.G.	Please select
20.0	99.3	0.3	Zm.1663.1.A1_at	AW574480	VQ motif family protein	-	3e+0	At3g04600	tRNA synthetase class I (W and Y) family protein	O.I.	C.G.	H.G.	Please select
19.9	99.3	0.8	Zm.3443.1.A1_at	BM335466	hypothetical protein LOC100276624	-	4e-1	At5g42635	glycine-rich protein	O.I.	C.G.	H.G.	Please select
19.9	99.3	0.5	Zm.663.1.S1_at	AF318075.1	cis-zeatin O-glucosyltransferase1	-	7e-1	At5g59580	UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1)	O.I.	C.G.	H.G.	Please select
19.9	99.3	0.1	Zm.18148.1.A1_at	CN844779	-	-	5e+0	At2g21320	zinc finger (B-box type) family protein	O.I.	C.G.	H.G.	Please select
19.6	99.3	3.1	Zm.14384.1.A1_at	CK144440	hypothetical protein LOC100191907	-	1e-1	At3g25850	DC1 domain-containing protein	O.I.	C.G.	H.G.	Please select
19.3	99.3	0.1	Zm.16973.1.S1_at	CD219246	VQ motif family protein	-	1e-8	At3g22160	VQ motif-containing protein	O.I.	C.G.	H.G.	Please select
19.2	99.3	0.1	Zm.17323.1.S1_at	CK370311	protein binding protein	-	3e-1	At1g76820	GTP binding / GTPase	O.I.	C.G.	H.G.	Please select
18.9	99.2	0.3	Zm.11918.1.A1_at	BM381808	hypothetical protein LOC100274802	-	7e-1	At2g44180	MAP2A (METHIONINE AMINOPEPTIDASE 2A)	O.I.	C.G.	H.G.	Please select
18.8	99.2	1.8	Zm.10189.2.A1_at	BM337907	hypothetical protein LOC100273749	-	2e-3	At1g01720	ATAF1	O.I.	C.G.	H.G.	Please select
18.4	99.2	9.1	Zm.8990.1.A1_at	CF634396	hypothetical protein LOC100217040	-	1e-33	At3g45300	IVD (ISOVALERYL-COA-DEHYDROGENASE)	O.I.	C.G.	H.G.	Please select
18.3	99.2	13.5	Zm.9414.1.A1_at	BM337964	-	-	1e+0	At2g46320	mitochondrial substrate carrier family protein	O.I.	C.G.	H.G.	Please select
17.9	99.2	0.4	Zm.9554.1.A1_at	BM267111	hypothetical protein LOC100280419	-	5e+0	At3g53850	-	O.I.	C.G.	H.G.	Please select
17.8	99.1	0.6	Zm.12101.2.S1_at	AI833552	-	-	4e+0	At4g34412	-	O.I.	C.G.	H.G.	Please select
17.6	99.1	13.5	Zm.1506.1.A1_at	X82184.1	defence-related protein	-	1e-1	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	O.I.	C.G.	H.G.	Please select
17.6	99.1	4.8	Zm.2073.2.S1_a_at	CK371318	asparagine synthetase 1 /// asparagine synthetase 3	-	3e-13	At3g47340	ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)	O.I.	C.G.	H.G.	Please select
17.6	99.1	0.3	Zm.4228.1.S1_at	AI783234	ethanolaminephosphotransferase	-	1e-17	At3g25585	AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE)	O.I.	C.G.	H.G.	Please select
17.5	99.1	3.4	Zm.7090.1.S1_at	AY105718.1	hypothetical protein LOC100191899	-	6e+0	At5g01740	-	O.I.	C.G.	H.G.	Please select
17.5	99.1	0.6	Zm.11896.1.A1_s_at	CO530711	SNF1-related protein kinase regulatory subunit beta-1	-	4e+0	At5g46940	invertase/pectin methylesterase inhibitor family protein	O.I.	C.G.	H.G.	Please select
17.2	99.1	4.1	Zm.10372.1.S1_at	AW433422	EF hand family protein	-	4e+0	At2g46390	unknown protein	O.I.	C.G.	H.G.	Please select
17.0	99.1	1.9	Zm.12422.1.S1_at	AW400260	-	-	9e-9	At4g13660	PRR2 (PINORESINOL REDUCTASE 2)	O.I.	C.G.	H.G.	Please select
17.0	99.1	0.0	Zm.10136.1.A1_at	BM381289	-	-	4e+0	At5g15290	integral membrane family protein	O.I.	C.G.	H.G.	Please select
16.9	99.1	0.4	Zm.9644.1.A1_at	CF635253	VQ motif family protein	-	5e+0	At4g16380	metal ion binding	O.I.	C.G.	H.G.	Please select
16.8	99.1	11.7	Zm.11530.2.A1_at	BM332875	-	-	1e+0	At3g27380	SDH2-1	O.I.	C.G.	H.G.	Please select
16.8	99.1	3.7	Zm.2139.1.S1_at	CF627469	hypothetical protein LOC100274481	-	7e-1	At3g15010	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.	Please select
16.8	99.1	0.6	Zm.949.1.A1_at	CF624182	-	-	1e-1	At5g15970	KIN2	O.I.	C.G.	H.G.	Please select
16.7	99.1	0.7	Zm.5744.1.A1_at	BM332131	hypothetical protein LOC100272761	-	1e+0	At3g14640	CYP72A10	O.I.	C.G.	H.G.	Please select

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