CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM377084

Assay name Genomic DNA - 45 day old leaf sample - mutant f1856

GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
93.9 100.0 0.1 Os05g0408800 9633.m03125 - - 1e+0 At5g44130 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR) O.I. C.G. H.G.
84.1 100.0 1.8 Os08g0132700 AK111409.1 - Conserved hypothetical protein 3e+0 At4g27654 unknown protein O.I. C.G. H.G.
74.6 99.9 0.6 Os02g0799900 9630.m05527 - - 4e+0 At5g24490 30S ribosomal protein, putative O.I. C.G. H.G.
73.6 99.9 0.1 Os09g0447700 9637.m02415 - - 2e+0 At5g55170 SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3) O.I. C.G. H.G.
73.1 99.9 0.1 Os11g0146100 AK105591.1 - AtPIP5K1 2e-1 At5g62020 AT-HSFB2A O.I. C.G. H.G.
69.1 99.9 0.1 Os12g0584400 9640.m03851 - - 3e+0 At3g09730 unknown protein O.I. C.G. H.G.
68.9 99.9 0.4 Os01g0711200 AK107001.1 - Protein kinase domain containing protein 3e-1 At2g46090 diacylglycerol kinase family protein O.I. C.G. H.G.
68.1 99.9 7.2 Os12g0205000 9640.m00973 - - 2e+1 At5g02150 binding O.I. C.G. H.G.
67.5 99.9 0.5 Os08g0162900 9636.m00591 - - 2e-3 At5g23900 60S ribosomal protein L13 (RPL13D) O.I. C.G. H.G.
67.1 99.9 1.0 Os12g0508233 9632.m02182 - - 3e-1 At1g08770 PRA1.E (PRENYLATED RAB ACCEPTOR 1.E) O.I. C.G. H.G.
67.0 99.9 0.4 Os04g0280300 AK102623.1 - Hypothetical protein 8e+0 At5g40645 nitrate-responsive NOI protein, putative O.I. C.G. H.G.
66.9 99.9 0.1 Os09g0411600 AK111456.1 - Protein prenyltransferase domain containingprotein 2e-5 At1g23110 unknown protein O.I. C.G. H.G.
66.7 99.9 1.0 Os05g0348400 AK121944.1 - - 3e+0 At4g05120 FUR1 (FUDR RESISTANT 1) O.I. C.G. H.G.
63.7 99.9 0.4 Os09g0134200 9637.m00333 - - 2e+0 At5g67640 unknown protein O.I. C.G. H.G.
63.6 99.9 0.1 Os04g0285200 9632.m01999 - - 7e-2 At2g20950 - O.I. C.G. H.G.
63.0 99.9 13.9 Os06g0267200 AK103070.1 - Conserved hypothetical protein 3e+0 At1g56220 dormancy/auxin associated family protein O.I. C.G. H.G.
62.7 99.9 9.4 Os09g0247300 9637.m00479 - - 6e-2 At5g15290 integral membrane family protein O.I. C.G. H.G.
62.2 99.9 0.4 Os12g0186800 9635.m01806 - - 8e+0 At5g45070 AtPP2-A8 (Phloem protein 2-A8) O.I. C.G. H.G.
60.3 99.9 1.9 Os10g0107300 NM_194532.1 - - 1e+0 At5g62150 peptidoglycan-binding LysM domain-containing protein O.I. C.G. H.G.
60.0 99.9 2.4 Os04g0164400 9632.m00736 - - 2e+0 At3g10526 unknown protein O.I. C.G. H.G.
59.6 99.9 0.4 Os05g0531700 AK110982.1 - Hypothetical protein 4e+0 At5g35100 peptidyl-prolyl cis-trans isomerase O.I. C.G. H.G.
59.1 99.9 1.0 Os03g0153700 9631.m00512 - - 8e-1 At4g27810 unknown protein O.I. C.G. H.G.
58.5 99.9 2.3 Os10g0348900 AK059264.1 - Hypothetical protein 1e-2 At5g38980 unknown protein O.I. C.G. H.G.
57.7 99.9 0.5 Os04g0200700 AK068428.1 - Conserved hypothetical protein 3e-2 At2g29670 binding O.I. C.G. H.G.
57.5 99.9 0.2 Os10g0361825 9638.m01826 - - 1e+0 At2g23150 NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3) O.I. C.G. H.G.
57.3 99.9 0.7 Os01g0320100 9629.m02078 - - 2e-1 At3g50150 unknown protein O.I. C.G. H.G.
56.5 99.9 0.6 Os08g0285200 AK112065.1 - The start codon is not identified. 1e-2 At1g80710 transducin family protein / WD-40 repeat family protein O.I. C.G. H.G.
56.1 99.9 0.7 Os04g0380700 9632.m02962 - - 7e-1 At2g26267 unknown protein O.I. C.G. H.G.
55.8 99.9 0.8 Os10g0388600 CB634585 - Peptidase C48, SUMO/Sentrin/Ubl1 family protein 5e+0 Atmg01030 - O.I. C.G. H.G.
55.6 99.9 0.3 Os04g0420100 AK121609.1 - Conserved hypothetical protein 3e+0 At5g40730 AGP24 O.I. C.G. H.G.
55.5 99.9 0.8 Os05g0549500 9633.m04434 - - 2e+0 At3g21900 receptor-like protein kinase-related O.I. C.G. H.G.
55.4 99.9 0.2 Os07g0557600 9635.m03679 - Conserved hypothetical protein 5e+0 At4g16790 hydroxyproline-rich glycoprotein family protein O.I. C.G. H.G.
55.2 99.9 0.4 Os06g0662800 9634.m04386 - Pollen allergen Lol p2 family protein 5e+0 At4g18510 CLE2 (CLAVATA3/ESR-RELATED) O.I. C.G. H.G.
55.0 99.9 0.2 Os09g0381700 9630.m03049 - - 3e-1 At3g01980 short-chain dehydrogenase/reductase (SDR) family protein O.I. C.G. H.G.
55.0 99.9 0.2 Os12g0432300 CB634333 - - 2e+0 At5g49600 unknown protein O.I. C.G. H.G.
54.6 99.9 0.5 Os11g0428400 9639.m02124 - - 4e-1 At4g28365 plastocyanin-like domain-containing protein O.I. C.G. H.G.
54.6 99.9 0.4 Os12g0558400 AK073071.1 - Hypothetical protein 3e-1 At3g05900 neurofilament protein-related O.I. C.G. H.G.
54.3 99.9 0.8 Os01g0386500 AK106513.1 - Hypothetical protein 9e-1 At2g22100 RNA recognition motif (RRM)-containing protein O.I. C.G. H.G.
54.1 99.9 0.3 Os10g0570100 9638.m03840 - - 2e+0 At1g58420 - O.I. C.G. H.G.
54.1 99.9 0.1 Os05g0169500 AK120872.1 - - 7e-1 At3g01160 unknown protein O.I. C.G. H.G.
53.8 99.9 0.3 Os08g0465900 9636.m03650 - DNA polymerase epsilon subunit B family protein 3e-5 At5g22110 ATDPB2 (ARABIDOPSIS THALIANA DNA POLYMERASE EPSILON SUBUNIT B2) O.I. C.G. H.G.
53.8 99.9 0.2 Os06g0268600 AK109608.1 - Hypothetical protein 7e-2 Atmg01190 - O.I. C.G. H.G.
53.7 99.9 0.2 Os07g0243500 NM_186825.1 - - 3e+0 At5g62180 AtCXE20 (Arabidopsis thaliana carboxyesterase 20) O.I. C.G. H.G.
53.5 99.9 2.8 Os08g0349300 AK062305.1 - Conserved hypothetical protein 4e+0 At5g38520 hydrolase, alpha/beta fold family protein O.I. C.G. H.G.
53.4 99.9 0.5 Os12g0174401 9640.m00686 - - 7e+0 At5g61530 small G protein family protein / RhoGAP family protein O.I. C.G. H.G.
53.2 99.9 0.6 Os11g0174600 9639.m00674 - - 3e+0 At1g10586 transcription regulator O.I. C.G. H.G.
53.0 99.9 0.7 Os11g0174950 9639.m00677 - - 3e+0 At5g25940 early nodulin-related O.I. C.G. H.G.
53.0 99.9 0.1 Os09g0283300 9637.m00840 - - 2e+0 Atmg00650 - O.I. C.G. H.G.
52.9 99.9 0.8 Os10g0499500 AK069398.1 - Fertility restorer 8e-2 At4g35710 unknown protein O.I. C.G. H.G.
52.9 99.9 0.0 Os01g0193200 9629.m00920 - - 3e+0 At3g18450 unknown protein O.I. C.G. H.G.
52.4 99.9 0.4 Os08g0338800 9636.m02458 - - 2e+0 At4g10695 unknown protein O.I. C.G. H.G.
52.3 99.9 0.8 Os04g0186800 9632.m00954 - Transmembrane protein 8e-7 At5g43360 PHT3 (PHOSPHATE TRANSPORTER 3) O.I. C.G. H.G.
52.2 99.9 3.9 Os07g0255200 AK062290.1 - - 8e-1 At5g63460 SAP domain-containing protein O.I. C.G. H.G.
52.2 99.9 0.3 Os11g0483500 9639.m02651 - - 9e-1 At5g12235 CLE22 (CLAVATA3/ESR-RELATED 22) O.I. C.G. H.G.
52.1 99.9 5.2 Os07g0437100 9635.m02449 - - 8e-1 At4g09660 - O.I. C.G. H.G.
52.1 99.9 1.8 Os02g0331200 AK100151.1 - Protein of unknown function DUF563 family protein 2e-6 At3g18170 transferase, transferring glycosyl groups O.I. C.G. H.G.
51.8 99.9 0.7 Os04g0554900 9632.m04518 - - 8e-1 At2g32890 RALFL17 (RALF-LIKE 17) O.I. C.G. H.G.
51.8 99.9 0.1 Os02g0253300 9630.m01445 - Plant protein of unknown function family protein 1e+0 At3g60410 unknown protein O.I. C.G. H.G.
51.5 99.9 2.4 Os04g0455400 9632.m03613 - - 1e+0 At2g30820 unknown protein O.I. C.G. H.G.
51.5 99.9 0.2 Os09g0446100 9637.m02399 - Hypothetical protein 3e-1 At5g20920 EIF2 BETA O.I. C.G. H.G.
51.4 99.9 1.8 Os07g0130300 NM_186211.1 - Lectin-like receptor kinase 7;1 4e-3 At2g37710 RLK (receptor lectin kinase) O.I. C.G. H.G.
51.2 99.9 0.4 Os05g0449700 9633.m03485 - - 5e+0 At5g03944 unknown protein O.I. C.G. H.G.
51.1 99.9 0.3 Os01g0592000 9629.m03908 - - 1e+0 At1g44224 - O.I. C.G. H.G.
51.0 99.9 0.5 Os12g0449900 9640.m02529 - - 5e+0 At3g27010 AT-TCP20 O.I. C.G. H.G.
50.9 99.9 0.4 Os02g0688400 9630.m04499 - - 6e+0 At5g07420 pectinesterase family protein O.I. C.G. H.G.
50.9 99.9 0.3 Os08g0273000 AK119305.1 - Hypothetical protein 5e+0 At4g14680 APS3 O.I. C.G. H.G.
50.8 99.9 0.2 Os12g0170500 AK110904.1 - - 1e-2 At1g67770 TEL2 (TERMINAL EAR1-LIKE 2) O.I. C.G. H.G.
50.7 99.9 0.8 Os08g0299900 9636.m02021 - Cyclin-like F-box domain containing protein 2e+0 At1g52390 unknown protein O.I. C.G. H.G.
50.5 99.9 0.6 Os06g0506100 AK107403.1 - Protein prenyltransferase domain containingprotein 4e-1 At3g16610 pentatricopeptide (PPR) repeat-containing protein O.I. C.G. H.G.
50.4 99.9 1.2 Os04g0477500 AK067372.1 - Glycosyl transferase, family 17 protein 8e-5 At5g14480 glycosyl transferase family 17 protein O.I. C.G. H.G.
49.9 99.9 0.4 Os07g0142800 NM_186259.1 - - 5e-1 At4g25410 DNA binding / transcription factor O.I. C.G. H.G.
49.8 99.9 1.0 Os04g0692700 9632.m05831 - SNF2-related domain containing protein 2e-16 At5g63950 CHR24 (chromatin remodeling 24) O.I. C.G. H.G.
49.8 99.9 0.7 Os06g0199500 AK064613.1 - Phosphopantothenoylcysteine decarboxylase (EC4.1.1.36) (Halotolerance protein Hal3a) (AtHal3a) (PPCDC)(AtCoaC) 1e-9 At3g18030 ATHAL3A O.I. C.G. H.G.
49.8 99.9 0.0 Os05g0152700 9633.m00528 - - 2e-1 At5g41440 zinc finger (C3HC4-type RING finger) family protein O.I. C.G. H.G.
49.7 99.9 2.2 Os08g0299800 9636.m02020 - - 1e-1 At4g12380 unknown protein O.I. C.G. H.G.
49.6 99.9 0.4 Os02g0146300 9630.m00448 - - 2e+0 At3g05710 SYP43 (SYNTAXIN OF PLANTS 43) O.I. C.G. H.G.
49.5 99.9 2.0 Os05g0202700 9633.m00994 - - 6e-1 At5g50915 basic helix-loop-helix (bHLH) family protein O.I. C.G. H.G.
49.5 99.9 0.6 Os04g0356400 9632.m02717 - - 3e+0 At3g58450 universal stress protein (USP) family protein O.I. C.G. H.G.
49.3 99.9 1.6 Os12g0477100 9640.m02820 - Disease resistance protein family protein 8e-2 At5g62240 unknown protein O.I. C.G. H.G.
49.3 99.9 0.6 Os02g0156100 9632.m02055 - Conserved hypothetical protein 1e-1 At5g11930 glutaredoxin family protein O.I. C.G. H.G.
49.2 99.9 0.8 Os12g0497833 9640.m03039 - - 6e-1 At5g67640 unknown protein O.I. C.G. H.G.
49.2 99.9 0.0 Os07g0562601 9635.m03723 - - 2e+0 At4g28170 unknown protein O.I. C.G. H.G.
49.1 99.9 0.6 Os12g0562700 CA762287 - Multidrug-resistance associated protein 3 7e-2 At1g71330 ATNAP5 O.I. C.G. H.G.
49.0 99.9 0.9 Os02g0773800 AK103063.1 - Hypothetical protein 1e+0 At3g18800 unknown protein O.I. C.G. H.G.
48.9 99.9 1.6 Os10g0426700 AK109772.1 - Conserved hypothetical protein 8e-1 At1g59860 17.6 kDa class I heat shock protein (HSP17.6A-CI) O.I. C.G. H.G.
48.9 99.9 1.4 Os10g0168400 9638.m00738 - - 3e+0 At2g17920 nucleic acid binding / zinc ion binding O.I. C.G. H.G.
48.8 99.9 1.1 Os07g0259300 NM_186926.1 - Conserved hypothetical protein 3e-2 At4g11430 hydroxyproline-rich glycoprotein family protein O.I. C.G. H.G.
48.8 99.9 0.7 Os03g0215625 9631.m01082 - - 2e+0 At5g07610 F-box family protein O.I. C.G. H.G.
48.7 99.9 4.4 Os02g0570100 9638.m02481 - - 4e+1 At5g63480 unknown protein O.I. C.G. H.G.
48.7 99.9 0.2 Os02g0632100 9630.m04029 - Kinase R-like protein (Fragment) 3e-4 At1g16260 protein kinase family protein O.I. C.G. H.G.
48.6 99.9 0.6 Os10g0549600 NM_197649.1 - - 1e+1 At1g19180 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1) O.I. C.G. H.G.
48.6 99.9 0.1 Os10g0326300 NM_195710.1 - - 3e-1 At2g47480 unknown protein O.I. C.G. H.G.
48.3 99.9 1.3 Os02g0800450 9630.m05537 - - 3e+0 At3g21680 unknown protein O.I. C.G. H.G.
48.3 99.9 0.4 Os04g0189200 9632.m00986 - - 1e-1 At2g19530 unknown protein O.I. C.G. H.G.
48.1 99.9 0.7 Os04g0478200 9632.m03817 - - 3e-1 At4g04830 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein O.I. C.G. H.G.
48.1 99.9 0.7 Os12g0254800 9640.m01482 - - 2e+1 At5g39300 ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25) O.I. C.G. H.G.
48.0 99.9 0.4 Os06g0209200 9634.m01042 - - 4e-2 At1g48380 RHL1 (ROOT HAIRLESS 1) O.I. C.G. H.G.
47.9 99.9 0.4 Os07g0117800 NM_194165.1 - NB-ARC domain containing protein 7e-1 At3g04940 CYSD1 (CYSTEINE SYNTHASE D1) O.I. C.G. H.G.
47.8 99.9 0.8 Os04g0495400 9632.m03986 - DOMON domain containing protein 8e-1 At3g22480 prefoldin-related KE2 family protein O.I. C.G. H.G.
47.8 99.9 0.7 Os03g0675600 AK062614.1 - Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] 1e+0 At4g34180 cyclase family protein O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
93.9	100.0	0.1	Os05g0408800	9633.m03125	-	-	1e+0	At5g44130	FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)	O.I.	C.G.	H.G.
84.1	100.0	1.8	Os08g0132700	AK111409.1	-	Conserved hypothetical protein	3e+0	At4g27654	unknown protein	O.I.	C.G.	H.G.
74.6	99.9	0.6	Os02g0799900	9630.m05527	-	-	4e+0	At5g24490	30S ribosomal protein, putative	O.I.	C.G.	H.G.
73.6	99.9	0.1	Os09g0447700	9637.m02415	-	-	2e+0	At5g55170	SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3)	O.I.	C.G.	H.G.
73.1	99.9	0.1	Os11g0146100	AK105591.1	-	AtPIP5K1	2e-1	At5g62020	AT-HSFB2A	O.I.	C.G.	H.G.
69.1	99.9	0.1	Os12g0584400	9640.m03851	-	-	3e+0	At3g09730	unknown protein	O.I.	C.G.	H.G.
68.9	99.9	0.4	Os01g0711200	AK107001.1	-	Protein kinase domain containing protein	3e-1	At2g46090	diacylglycerol kinase family protein	O.I.	C.G.	H.G.
68.1	99.9	7.2	Os12g0205000	9640.m00973	-	-	2e+1	At5g02150	binding	O.I.	C.G.	H.G.
67.5	99.9	0.5	Os08g0162900	9636.m00591	-	-	2e-3	At5g23900	60S ribosomal protein L13 (RPL13D)	O.I.	C.G.	H.G.
67.1	99.9	1.0	Os12g0508233	9632.m02182	-	-	3e-1	At1g08770	PRA1.E (PRENYLATED RAB ACCEPTOR 1.E)	O.I.	C.G.	H.G.
67.0	99.9	0.4	Os04g0280300	AK102623.1	-	Hypothetical protein	8e+0	At5g40645	nitrate-responsive NOI protein, putative	O.I.	C.G.	H.G.
66.9	99.9	0.1	Os09g0411600	AK111456.1	-	Protein prenyltransferase domain containingprotein	2e-5	At1g23110	unknown protein	O.I.	C.G.	H.G.
66.7	99.9	1.0	Os05g0348400	AK121944.1	-	-	3e+0	At4g05120	FUR1 (FUDR RESISTANT 1)	O.I.	C.G.	H.G.
63.7	99.9	0.4	Os09g0134200	9637.m00333	-	-	2e+0	At5g67640	unknown protein	O.I.	C.G.	H.G.
63.6	99.9	0.1	Os04g0285200	9632.m01999	-	-	7e-2	At2g20950	-	O.I.	C.G.	H.G.
63.0	99.9	13.9	Os06g0267200	AK103070.1	-	Conserved hypothetical protein	3e+0	At1g56220	dormancy/auxin associated family protein	O.I.	C.G.	H.G.
62.7	99.9	9.4	Os09g0247300	9637.m00479	-	-	6e-2	At5g15290	integral membrane family protein	O.I.	C.G.	H.G.
62.2	99.9	0.4	Os12g0186800	9635.m01806	-	-	8e+0	At5g45070	AtPP2-A8 (Phloem protein 2-A8)	O.I.	C.G.	H.G.
60.3	99.9	1.9	Os10g0107300	NM_194532.1	-	-	1e+0	At5g62150	peptidoglycan-binding LysM domain-containing protein	O.I.	C.G.	H.G.
60.0	99.9	2.4	Os04g0164400	9632.m00736	-	-	2e+0	At3g10526	unknown protein	O.I.	C.G.	H.G.
59.6	99.9	0.4	Os05g0531700	AK110982.1	-	Hypothetical protein	4e+0	At5g35100	peptidyl-prolyl cis-trans isomerase	O.I.	C.G.	H.G.
59.1	99.9	1.0	Os03g0153700	9631.m00512	-	-	8e-1	At4g27810	unknown protein	O.I.	C.G.	H.G.
58.5	99.9	2.3	Os10g0348900	AK059264.1	-	Hypothetical protein	1e-2	At5g38980	unknown protein	O.I.	C.G.	H.G.
57.7	99.9	0.5	Os04g0200700	AK068428.1	-	Conserved hypothetical protein	3e-2	At2g29670	binding	O.I.	C.G.	H.G.
57.5	99.9	0.2	Os10g0361825	9638.m01826	-	-	1e+0	At2g23150	NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)	O.I.	C.G.	H.G.
57.3	99.9	0.7	Os01g0320100	9629.m02078	-	-	2e-1	At3g50150	unknown protein	O.I.	C.G.	H.G.
56.5	99.9	0.6	Os08g0285200	AK112065.1	-	The start codon is not identified.	1e-2	At1g80710	transducin family protein / WD-40 repeat family protein	O.I.	C.G.	H.G.
56.1	99.9	0.7	Os04g0380700	9632.m02962	-	-	7e-1	At2g26267	unknown protein	O.I.	C.G.	H.G.
55.8	99.9	0.8	Os10g0388600	CB634585	-	Peptidase C48, SUMO/Sentrin/Ubl1 family protein	5e+0	Atmg01030	-	O.I.	C.G.	H.G.
55.6	99.9	0.3	Os04g0420100	AK121609.1	-	Conserved hypothetical protein	3e+0	At5g40730	AGP24	O.I.	C.G.	H.G.
55.5	99.9	0.8	Os05g0549500	9633.m04434	-	-	2e+0	At3g21900	receptor-like protein kinase-related	O.I.	C.G.	H.G.
55.4	99.9	0.2	Os07g0557600	9635.m03679	-	Conserved hypothetical protein	5e+0	At4g16790	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	H.G.
55.2	99.9	0.4	Os06g0662800	9634.m04386	-	Pollen allergen Lol p2 family protein	5e+0	At4g18510	CLE2 (CLAVATA3/ESR-RELATED)	O.I.	C.G.	H.G.
55.0	99.9	0.2	Os09g0381700	9630.m03049	-	-	3e-1	At3g01980	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	C.G.	H.G.
55.0	99.9	0.2	Os12g0432300	CB634333	-	-	2e+0	At5g49600	unknown protein	O.I.	C.G.	H.G.
54.6	99.9	0.5	Os11g0428400	9639.m02124	-	-	4e-1	At4g28365	plastocyanin-like domain-containing protein	O.I.	C.G.	H.G.
54.6	99.9	0.4	Os12g0558400	AK073071.1	-	Hypothetical protein	3e-1	At3g05900	neurofilament protein-related	O.I.	C.G.	H.G.
54.3	99.9	0.8	Os01g0386500	AK106513.1	-	Hypothetical protein	9e-1	At2g22100	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.
54.1	99.9	0.3	Os10g0570100	9638.m03840	-	-	2e+0	At1g58420	-	O.I.	C.G.	H.G.
54.1	99.9	0.1	Os05g0169500	AK120872.1	-	-	7e-1	At3g01160	unknown protein	O.I.	C.G.	H.G.
53.8	99.9	0.3	Os08g0465900	9636.m03650	-	DNA polymerase epsilon subunit B family protein	3e-5	At5g22110	ATDPB2 (ARABIDOPSIS THALIANA DNA POLYMERASE EPSILON SUBUNIT B2)	O.I.	C.G.	H.G.
53.8	99.9	0.2	Os06g0268600	AK109608.1	-	Hypothetical protein	7e-2	Atmg01190	-	O.I.	C.G.	H.G.
53.7	99.9	0.2	Os07g0243500	NM_186825.1	-	-	3e+0	At5g62180	AtCXE20 (Arabidopsis thaliana carboxyesterase 20)	O.I.	C.G.	H.G.
53.5	99.9	2.8	Os08g0349300	AK062305.1	-	Conserved hypothetical protein	4e+0	At5g38520	hydrolase, alpha/beta fold family protein	O.I.	C.G.	H.G.
53.4	99.9	0.5	Os12g0174401	9640.m00686	-	-	7e+0	At5g61530	small G protein family protein / RhoGAP family protein	O.I.	C.G.	H.G.
53.2	99.9	0.6	Os11g0174600	9639.m00674	-	-	3e+0	At1g10586	transcription regulator	O.I.	C.G.	H.G.
53.0	99.9	0.7	Os11g0174950	9639.m00677	-	-	3e+0	At5g25940	early nodulin-related	O.I.	C.G.	H.G.
53.0	99.9	0.1	Os09g0283300	9637.m00840	-	-	2e+0	Atmg00650	-	O.I.	C.G.	H.G.
52.9	99.9	0.8	Os10g0499500	AK069398.1	-	Fertility restorer	8e-2	At4g35710	unknown protein	O.I.	C.G.	H.G.
52.9	99.9	0.0	Os01g0193200	9629.m00920	-	-	3e+0	At3g18450	unknown protein	O.I.	C.G.	H.G.
52.4	99.9	0.4	Os08g0338800	9636.m02458	-	-	2e+0	At4g10695	unknown protein	O.I.	C.G.	H.G.
52.3	99.9	0.8	Os04g0186800	9632.m00954	-	Transmembrane protein	8e-7	At5g43360	PHT3 (PHOSPHATE TRANSPORTER 3)	O.I.	C.G.	H.G.
52.2	99.9	3.9	Os07g0255200	AK062290.1	-	-	8e-1	At5g63460	SAP domain-containing protein	O.I.	C.G.	H.G.
52.2	99.9	0.3	Os11g0483500	9639.m02651	-	-	9e-1	At5g12235	CLE22 (CLAVATA3/ESR-RELATED 22)	O.I.	C.G.	H.G.
52.1	99.9	5.2	Os07g0437100	9635.m02449	-	-	8e-1	At4g09660	-	O.I.	C.G.	H.G.
52.1	99.9	1.8	Os02g0331200	AK100151.1	-	Protein of unknown function DUF563 family protein	2e-6	At3g18170	transferase, transferring glycosyl groups	O.I.	C.G.	H.G.
51.8	99.9	0.7	Os04g0554900	9632.m04518	-	-	8e-1	At2g32890	RALFL17 (RALF-LIKE 17)	O.I.	C.G.	H.G.
51.8	99.9	0.1	Os02g0253300	9630.m01445	-	Plant protein of unknown function family protein	1e+0	At3g60410	unknown protein	O.I.	C.G.	H.G.
51.5	99.9	2.4	Os04g0455400	9632.m03613	-	-	1e+0	At2g30820	unknown protein	O.I.	C.G.	H.G.
51.5	99.9	0.2	Os09g0446100	9637.m02399	-	Hypothetical protein	3e-1	At5g20920	EIF2 BETA	O.I.	C.G.	H.G.
51.4	99.9	1.8	Os07g0130300	NM_186211.1	-	Lectin-like receptor kinase 7;1	4e-3	At2g37710	RLK (receptor lectin kinase)	O.I.	C.G.	H.G.
51.2	99.9	0.4	Os05g0449700	9633.m03485	-	-	5e+0	At5g03944	unknown protein	O.I.	C.G.	H.G.
51.1	99.9	0.3	Os01g0592000	9629.m03908	-	-	1e+0	At1g44224	-	O.I.	C.G.	H.G.
51.0	99.9	0.5	Os12g0449900	9640.m02529	-	-	5e+0	At3g27010	AT-TCP20	O.I.	C.G.	H.G.
50.9	99.9	0.4	Os02g0688400	9630.m04499	-	-	6e+0	At5g07420	pectinesterase family protein	O.I.	C.G.	H.G.
50.9	99.9	0.3	Os08g0273000	AK119305.1	-	Hypothetical protein	5e+0	At4g14680	APS3	O.I.	C.G.	H.G.
50.8	99.9	0.2	Os12g0170500	AK110904.1	-	-	1e-2	At1g67770	TEL2 (TERMINAL EAR1-LIKE 2)	O.I.	C.G.	H.G.
50.7	99.9	0.8	Os08g0299900	9636.m02021	-	Cyclin-like F-box domain containing protein	2e+0	At1g52390	unknown protein	O.I.	C.G.	H.G.
50.5	99.9	0.6	Os06g0506100	AK107403.1	-	Protein prenyltransferase domain containingprotein	4e-1	At3g16610	pentatricopeptide (PPR) repeat-containing protein	O.I.	C.G.	H.G.
50.4	99.9	1.2	Os04g0477500	AK067372.1	-	Glycosyl transferase, family 17 protein	8e-5	At5g14480	glycosyl transferase family 17 protein	O.I.	C.G.	H.G.
49.9	99.9	0.4	Os07g0142800	NM_186259.1	-	-	5e-1	At4g25410	DNA binding / transcription factor	O.I.	C.G.	H.G.
49.8	99.9	1.0	Os04g0692700	9632.m05831	-	SNF2-related domain containing protein	2e-16	At5g63950	CHR24 (chromatin remodeling 24)	O.I.	C.G.	H.G.
49.8	99.9	0.7	Os06g0199500	AK064613.1	-	Phosphopantothenoylcysteine decarboxylase (EC4.1.1.36) (Halotolerance protein Hal3a) (AtHal3a) (PPCDC)(AtCoaC)	1e-9	At3g18030	ATHAL3A	O.I.	C.G.	H.G.
49.8	99.9	0.0	Os05g0152700	9633.m00528	-	-	2e-1	At5g41440	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.
49.7	99.9	2.2	Os08g0299800	9636.m02020	-	-	1e-1	At4g12380	unknown protein	O.I.	C.G.	H.G.
49.6	99.9	0.4	Os02g0146300	9630.m00448	-	-	2e+0	At3g05710	SYP43 (SYNTAXIN OF PLANTS 43)	O.I.	C.G.	H.G.
49.5	99.9	2.0	Os05g0202700	9633.m00994	-	-	6e-1	At5g50915	basic helix-loop-helix (bHLH) family protein	O.I.	C.G.	H.G.
49.5	99.9	0.6	Os04g0356400	9632.m02717	-	-	3e+0	At3g58450	universal stress protein (USP) family protein	O.I.	C.G.	H.G.
49.3	99.9	1.6	Os12g0477100	9640.m02820	-	Disease resistance protein family protein	8e-2	At5g62240	unknown protein	O.I.	C.G.	H.G.
49.3	99.9	0.6	Os02g0156100	9632.m02055	-	Conserved hypothetical protein	1e-1	At5g11930	glutaredoxin family protein	O.I.	C.G.	H.G.
49.2	99.9	0.8	Os12g0497833	9640.m03039	-	-	6e-1	At5g67640	unknown protein	O.I.	C.G.	H.G.
49.2	99.9	0.0	Os07g0562601	9635.m03723	-	-	2e+0	At4g28170	unknown protein	O.I.	C.G.	H.G.
49.1	99.9	0.6	Os12g0562700	CA762287	-	Multidrug-resistance associated protein 3	7e-2	At1g71330	ATNAP5	O.I.	C.G.	H.G.
49.0	99.9	0.9	Os02g0773800	AK103063.1	-	Hypothetical protein	1e+0	At3g18800	unknown protein	O.I.	C.G.	H.G.
48.9	99.9	1.6	Os10g0426700	AK109772.1	-	Conserved hypothetical protein	8e-1	At1g59860	17.6 kDa class I heat shock protein (HSP17.6A-CI)	O.I.	C.G.	H.G.
48.9	99.9	1.4	Os10g0168400	9638.m00738	-	-	3e+0	At2g17920	nucleic acid binding / zinc ion binding	O.I.	C.G.	H.G.
48.8	99.9	1.1	Os07g0259300	NM_186926.1	-	Conserved hypothetical protein	3e-2	At4g11430	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	H.G.
48.8	99.9	0.7	Os03g0215625	9631.m01082	-	-	2e+0	At5g07610	F-box family protein	O.I.	C.G.	H.G.
48.7	99.9	4.4	Os02g0570100	9638.m02481	-	-	4e+1	At5g63480	unknown protein	O.I.	C.G.	H.G.
48.7	99.9	0.2	Os02g0632100	9630.m04029	-	Kinase R-like protein (Fragment)	3e-4	At1g16260	protein kinase family protein	O.I.	C.G.	H.G.
48.6	99.9	0.6	Os10g0549600	NM_197649.1	-	-	1e+1	At1g19180	JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)	O.I.	C.G.	H.G.
48.6	99.9	0.1	Os10g0326300	NM_195710.1	-	-	3e-1	At2g47480	unknown protein	O.I.	C.G.	H.G.
48.3	99.9	1.3	Os02g0800450	9630.m05537	-	-	3e+0	At3g21680	unknown protein	O.I.	C.G.	H.G.
48.3	99.9	0.4	Os04g0189200	9632.m00986	-	-	1e-1	At2g19530	unknown protein	O.I.	C.G.	H.G.
48.1	99.9	0.7	Os04g0478200	9632.m03817	-	-	3e-1	At4g04830	methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein	O.I.	C.G.	H.G.
48.1	99.9	0.7	Os12g0254800	9640.m01482	-	-	2e+1	At5g39300	ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25)	O.I.	C.G.	H.G.
48.0	99.9	0.4	Os06g0209200	9634.m01042	-	-	4e-2	At1g48380	RHL1 (ROOT HAIRLESS 1)	O.I.	C.G.	H.G.
47.9	99.9	0.4	Os07g0117800	NM_194165.1	-	NB-ARC domain containing protein	7e-1	At3g04940	CYSD1 (CYSTEINE SYNTHASE D1)	O.I.	C.G.	H.G.
47.8	99.9	0.8	Os04g0495400	9632.m03986	-	DOMON domain containing protein	8e-1	At3g22480	prefoldin-related KE2 family protein	O.I.	C.G.	H.G.
47.8	99.9	0.7	Os03g0675600	AK062614.1	-	Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]	1e+0	At4g34180	cyclase family protein	O.I.	C.G.	H.G.

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GSM ID	GSM377084
Assay name	Genomic DNA - 45 day old leaf sample - mutant f1856
GSE experiment	GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Microarray experiments to specifically-expressed genes

GSM ID GSM377084 Assay name Genomic DNA - 45 day old leaf sample - mutant f1856 GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

GSM ID GSM377084

Assay name Genomic DNA - 45 day old leaf sample - mutant f1856

GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays