Microarray experiments to specifically-expressed genes

GSM ID GSM377083
Assay name Genomic DNA - 45 day old leaf sample - mutant g6989
GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
331.8100.00.3Os05g02422009633.m01342--1e-1At3g24506unknown proteinO.I.C.G.H.G.
237.9100.00.2Os06g06411009634.m04188-Cytochrome P450 family protein1e-1At3g55880unknown proteinO.I.C.G.H.G.
144.2100.00.1Os06g02890009634.m01802--4e+0At5g47350palmitoyl protein thioesterase family proteinO.I.C.G.H.G.
110.7100.0158.6Os06g05655009634.m03516--6e-3At3g15750unknown proteinO.I.C.G.H.G.
107.4100.00.0Os01g02249009629.m01214--2e+1At5g51105unknown proteinO.I.C.G.H.G.
99.6100.01.6Os07g0491800AK106952.1-Cytochrome P450 family protein4e+0At5g08770unknown proteinO.I.C.G.H.G.
96.8100.00.0Os12g06294509640.m04272--1e-1At1g27710glycine-rich proteinO.I.C.G.H.G.
96.7100.04096.5Os10g0353800X15901.1--0Atcg00020-O.I.C.G.H.G.
94.7100.00.2Os03g03842009631.m02624--9e-1At2g45520unknown proteinO.I.C.G.H.G.
89.5100.00.5Os09g03829009637.m01852--7e-1At2g27370integral membrane family proteinO.I.C.G.H.G.
85.0100.00.1Os06g03237009634.m02143--7e-1At2g37470histone H2B, putativeO.I.C.G.H.G.
84.0100.00.3Os03g07989009631.m05747--2e+0At3g52760integral membrane Yip1 family proteinO.I.C.G.H.G.
79.199.912.0Os01g0367200NM_193800.1--3e+1At3g18690MKS1 (MAP kinase substrate 1)O.I.C.G.H.G.
77.699.90.0Os07g02675009635.m01637--8e-1At3g27400pectate lyase family proteinO.I.C.G.H.G.
77.199.90.0Os09g05542669637.m03247--2e+0At4g03050AOP3O.I.C.G.H.G.
76.299.90.6Os04g04174009632.m03266-U box domain containing protein7e-1At4g01040glycosyl hydrolase family 18 proteinO.I.C.G.H.G.
73.799.9401.4Os12g0423100NM_195975.1--6e+0At3g27890NQR (NADPH:QUINONE OXIDOREDUCTASE)O.I.C.G.H.G.
69.699.90.1Os06g02728009634.m01624-Protein of unknown function DUF231 domaincontaining protein1e-6At5g15900unknown proteinO.I.C.G.H.G.
68.899.90.6Os05g04649009633.m03618--4e-1At4g30410transcription factorO.I.C.G.H.G.
68.299.91.4Os09g04953009637.m02812--3e-1At5g25940early nodulin-relatedO.I.C.G.H.G.
66.299.90.0Os02g01079009630.m00081--1e-4At3g47780ATATH6O.I.C.G.H.G.
65.799.90.1Os09g03780009637.m01811--5e-1At5g23100unknown proteinO.I.C.G.H.G.
64.299.94.5Os05g04509009638.m01919--5e+0At5g15060-O.I.C.G.H.G.
63.399.90.3Os01g05179009629.m03125--2e-2At5g42020BIP2O.I.C.G.H.G.
63.199.90.2Os08g04153009636.m03198--6e-1At1g24240ribosomal protein L19 family proteinO.I.C.G.H.G.
61.499.90.4Os03g07462009631.m05242--5e-1At5g20720CPN20 (CHAPERONIN 20)O.I.C.G.H.G.
59.099.90.2Os10g03936009638.m02146--9e-3At1g09390GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
59.099.90.1Os07g0628100NM_193053.1--2e+1At5g63400ADK1 (ADENYLATE KINASE 1)O.I.C.G.H.G.
58.699.93.9Os01g0253700NM_187880.1--4e+0At4g24026unknown proteinO.I.C.G.H.G.
58.299.90.4Os01g0935100NM_190049.1--2e-5At5g47640NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2)O.I.C.G.H.G.
57.999.90.2Os06g02806009634.m01699--9e-1At3g57500unknown proteinO.I.C.G.H.G.
57.999.90.1Os04g03649009632.m02797--4e+1At5g66040STR16 (SULFURTRANSFERASE PROTEIN 16)O.I.C.G.H.G.
57.899.90.1Os01g0615500NM_192788.1-ABC transporter related domain containing protein3e-1At2g13610ABC transporter family proteinO.I.C.G.H.G.
57.299.90.2Os12g04319009640.m02298--5e-1At2g04480unknown proteinO.I.C.G.H.G.
56.699.90.2Os06g01568009634.m00554--2e+0At5g55570unknown proteinO.I.C.G.H.G.
56.499.90.3Os02g03222009630.m02080--8e-1At4g31270transcription factorO.I.C.G.H.G.
55.099.90.2Os03g03111009631.m01955--3e+0At1g02710glycine-rich proteinO.I.C.G.H.G.
54.499.90.4Os08g0465400AK068332.1-Conserved hypothetical protein3e+0At5g46730glycine-rich proteinO.I.C.G.H.G.
54.199.91.4Os04g05290009632.m04290--1e+0At5g44860unknown proteinO.I.C.G.H.G.
54.199.90.2Os01g08095009629.m05841--2e+0At3g07490AGD11 (ARF-GAP domain 11)O.I.C.G.H.G.
52.699.90.3Os03g03182009631.m02010--7e+0At3g29560unknown proteinO.I.C.G.H.G.
51.699.91.1Os01g0285966NM_187733.1--5e-1At4g32020unknown proteinO.I.C.G.H.G.
51.699.90.4Os09g04564009637.m02502--1e+0At3g61900auxin-responsive family proteinO.I.C.G.H.G.
51.399.90.2Os04g01284009632.m00297-Cytochrome P450 family protein3e+0At4g18620-O.I.C.G.H.G.
50.699.90.0Os06g02255009634.m01192--4e+0At5g130505-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)O.I.C.G.H.G.
50.599.956.6Os01g0899300NM_190295.1--6e-54Atcg00480-O.I.C.G.H.G.
50.599.90.7Os07g05429009635.m03544-Plastocyanin-like domain containing protein4e-1At5g26630MADS-box protein (AGL35)O.I.C.G.H.G.
50.499.959.7Os06g07100009634.m04835--2e+0At5g28295unknown proteinO.I.C.G.H.G.
50.299.91.3Os07g0497800NM_187378.1--2e+0At5g14690unknown proteinO.I.C.G.H.G.
50.199.98.6Os02g01320009630.m00296--1e+1At5g20110dynein light chain, putativeO.I.C.G.H.G.
49.899.90.0Os12g04452009640.m02474-O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)2e+1At5g52547unknown proteinO.I.C.G.H.G.
49.799.98.5Os01g03047009629.m01946--4e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.C.G.H.G.
49.799.90.3Os09g04508019637.m02443--1e+0At5g26070hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
48.499.90.5Os12g04503009640.m02536--2e-1At5g07510GRP14O.I.C.G.H.G.
48.499.90.2Os10g03521009638.m01760--2e+0Atmg00080-O.I.C.G.H.G.
47.699.941.1Os11g02312009639.m01189--3e+0At1g15230unknown proteinO.I.C.G.H.G.
47.499.90.8Os10g0445900AK109236.1-Hypothetical protein3e-1At1g30800-O.I.C.G.H.G.
47.399.90.5Os02g07576009630.m05129--7e-1At2g32030GCN5-related N-acetyltransferase (GNAT) family proteinO.I.C.G.H.G.
47.399.90.0Os01g01147009629.m00156-LRK335e-2At1g70250receptor serine/threonine kinase, putativeO.I.C.G.H.G.
46.899.90.2Os05g0580100AK110644.1-Hypothetical protein2e+0At5g30341unknown proteinO.I.C.G.H.G.
46.599.90.1Os10g01097009638.m00111--5e-2At1g68570proton-dependent oligopeptide transport (POT) family proteinO.I.C.G.H.G.
46.299.93.2Os05g03274019633.m02359--8e+0Atmg00240-O.I.C.G.H.G.
46.099.912.1Os04g06817009632.m05722--1e+0At2g28790osmotin-like protein, putativeO.I.C.G.H.G.
45.899.90.1Os10g04211009638.m02420--2e-1At4g11430hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
45.199.90.6Os06g0273301NM_185773.1--4e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)O.I.C.G.H.G.
45.099.90.7Os11g02997009639.m01805--9e-1At1g54215proline-rich family proteinO.I.C.G.H.G.
44.999.90.4Os08g05199009636.m04138-Exo70 exocyst complex subunit family protein7e-2At2g32890RALFL17 (RALF-LIKE 17)O.I.C.G.H.G.
44.899.90.2Os05g02472019633.m01400--2e+0At4g16160mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.C.G.H.G.
44.799.91.0Os03g04194009631.m02998--1e+0At3g09980unknown proteinO.I.C.G.H.G.
44.699.90.6Os08g0491400AK109684.1-ARM repeat fold domain containing protein3e+0At2g41660MIZ1 (mizu-kussei 1)O.I.C.G.H.G.
44.699.90.2Os04g02476009632.m01580--4e+0At3g09180unknown proteinO.I.C.G.H.G.
44.499.90.3Os04g04610009632.m03658-Myb, DNA-binding domain containing protein5e-14At3g01140MYB106 (myb domain protein 106)O.I.C.G.H.G.
43.999.90.0Os12g04271009640.m02277--6e-1At3g04800ATTIM23-3O.I.C.G.H.G.
43.499.9876.8Os04g0235700X15901.1--0Atcg00120-O.I.C.G.H.G.
43.499.9838.3Os01g0791200AK062864.1-NADH dehydrogenase subunit 2 [Oryza sativa(japonica cultivar-group)]6e-34Atcg01250-O.I.C.G.H.G.
43.499.90.3Os08g0324200AK107845.1-Harpin-induced 1 domain containing protein1e-1At5g19875unknown proteinO.I.C.G.H.G.
43.399.9150.9Os12g02394669640.m01323--2e+1At5g59380MBD6O.I.C.G.H.G.
43.399.91.1Os12g01083009640.m00075--9e+0At4g11485LCR11 (Low-molecular-weight cysteine-rich 11)O.I.C.G.H.G.
43.199.90.5Os05g01846669633.m00828--2e+0At5g38220hydrolaseO.I.C.G.H.G.
42.999.90.2Os11g04170669633.m02265--1e-1At5g22930unknown proteinO.I.C.G.H.G.
42.999.90.0Os10g0213100NM_195547.1-Protein of unknown function DUF1409 domaincontaining protein3e-2At3g22200POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)O.I.C.G.H.G.
42.799.90.2Os06g03460009634.m02343--7e-2At1g75550glycine-rich proteinO.I.C.G.H.G.
42.699.9797.6Os10g0355000X15901.1-DNA-directed RNA polymerase beta chain (EC2.7.7.6) (PEP) (Plastid- encoded RNA polymerase betasubunit) (RNA polymerase beta subunit)2e-160Atcg00190-O.I.C.G.H.G.
42.699.90.0Os09g03491009637.m01540-Protein kinase family protein8e-1At5g06010unknown proteinO.I.C.G.H.G.
42.599.93.8Os11g02146009629.m01785--4e-1At1g01490heavy-metal-associated domain-containing proteinO.I.C.G.H.G.
42.299.91472.9Os06g0598100AK059592.1-Photosystem II P680 chlorophyll A apoprotein(CP-47 protein)0Atcg00680-O.I.C.G.H.G.
42.299.90.6Os01g03402009629.m02293--5e-1At1g04445zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
42.299.90.1Os03g08246009631.m06006-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein1e+1At5g67060HEC1 (HECATE 1)O.I.C.G.H.G.
41.899.93.0Os05g04738009633.m03691--2e+0At2g27530PGY1 (PIGGYBACK1)O.I.C.G.H.G.
41.899.91.5Os03g05670009631.m03539--7e-1At1g79850RPS17 (RIBOSOMAL PROTEIN S17)O.I.C.G.H.G.
41.899.90.1Os09g02502009637.m00525-Conserved hypothetical protein8e+0At5g48950thioesterase family proteinO.I.C.G.H.G.
41.699.90.2Os09g04232009637.m02208-Protein kinase domain containing protein3e-2At3g19700IKU2 (HAIKU2)O.I.C.G.H.G.
41.299.90.4Os09g05558009637.m03271-AMP-dependent synthetase and ligase domaincontaining protein2e-1At1g65890AAE12 (ACYL ACTIVATING ENZYME 12)O.I.C.G.H.G.
41.099.910.8Os09g03988019637.m02003--4e-1At3g44950glycine-rich proteinO.I.C.G.H.G.
40.999.90.3Os12g01107509640.m00098--5e+0At1g66260RNA and export factor-binding protein, putativeO.I.C.G.H.G.
40.899.90.0Os03g02811009631.m01693-Ankyrin repeat containing protein3e-10At1g07710ankyrin repeat family proteinO.I.C.G.H.G.
40.799.9213.1Os05g0597600NM_190351.1--4e+0At4g25560AtMYB18 (myb domain protein 18)O.I.C.G.H.G.
40.799.93.7Os09g0373100NM_185357.1--7e-2At3g26580-O.I.C.G.H.G.
40.599.90.1Os01g0246000NM_188759.1--3e-1At3g26561unknown proteinO.I.C.G.H.G.
39.599.91.3Os01g01413009629.m00404--1e-30At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)O.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage