Microarray experiments to specifically-expressed genes

GSM ID GSM377082
Assay name Genomic DNA - 45 day old leaf sample - mutant g9799
GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
84.5100.00.2Os01g0372500Y07955.1-Leucoanthocyanidin dioxygenase 18e-1At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)O.I.C.G.H.G.
83.5100.00.1Os05g03199009633.m02302-(1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC3.2.1.8) (Fragment)2e-1At4g08160glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinO.I.C.G.H.G.
71.199.90.0Os04g0398400AK111123.1--3e-1At5g13180ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)O.I.C.G.H.G.
67.799.90.1Os01g0638800NM_192251.1--9e-3At3g01516unknown proteinO.I.C.G.H.G.
67.599.90.6Os10g03766009638.m01956--2e+0At1g78410VQ motif-containing proteinO.I.C.G.H.G.
64.999.90.1Os05g02508009633.m01444--5e+0At4g16444unknown proteinO.I.C.G.H.G.
63.799.90.6Os05g03275009633.m02360--6e-1At1g76010nucleic acid bindingO.I.C.G.H.G.
63.199.90.2Os06g01378009634.m00379--4e+0At4g19270unknown proteinO.I.C.G.H.G.
58.299.90.9Os12g0134600AK109609.1--3e+0At5g44860unknown proteinO.I.C.G.H.G.
57.599.90.3Os11g05580009639.m03180--3e+0At1g78550oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.H.G.
57.099.90.2Os07g06223009635.m04307-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein2e-1At1g22380AtUGT85A3 (UDP-glucosyl transferase 85A3)O.I.C.G.H.G.
56.799.90.3Os06g0559900AK106943.1-Conserved hypothetical protein2e-1At2g38460ATIREG1 (IRON-REGULATED PROTEIN 1)O.I.C.G.H.G.
55.999.90.3Os09g0364100AK071233.1-Conserved hypothetical protein2e+0At5g55570unknown proteinO.I.C.G.H.G.
50.299.90.1Os02g02340009630.m01289-Conserved hypothetical protein2e-5At1g42710-O.I.C.G.H.G.
50.099.90.5Os03g0432200AK111483.1-Hypothetical protein7e-1At5g17650glycine/proline-rich proteinO.I.C.G.H.G.
49.899.90.3Os05g03539019633.m02613--7e-1At1g73165CLE1 (CLAVATA3/ESR-RELATED 1)O.I.C.G.H.G.
48.999.91.2Os02g0524800AK106670.1-Conserved hypothetical protein5e-2At5g37200zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
48.999.90.5Os07g0186500AK122165.1-Disease resistance protein family protein2e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
48.699.90.2Os06g05190009634.m03061--3e-2At4g2589060S acidic ribosomal protein P3 (RPP3A)O.I.C.G.H.G.
48.099.90.3Os03g05813009631.m03687--4e+0At5g59780MYB59 (MYB DOMAIN PROTEIN 59)O.I.C.G.H.G.
47.599.90.0Os01g05968009629.m03956--2e+0At5g37940NADP-dependent oxidoreductase, putativeO.I.C.G.H.G.
47.299.90.9Os07g05033669635.m03143--2e+1At5g58990unknown proteinO.I.C.G.H.G.
47.099.91.4Os01g06742009629.m04652-Hypothetical protein9e-1At5g24870zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
47.099.90.3Os12g01868009635.m01806--8e+0At5g45070AtPP2-A8 (Phloem protein 2-A8)O.I.C.G.H.G.
46.999.90.1Os01g0648900NM_192349.1--1e+0At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.C.G.H.G.
46.899.90.6Os08g0103100AK067064.1-Hypothetical protein9e-1At3g27010AT-TCP20O.I.C.G.H.G.
46.899.90.2Os01g0518600NM_193641.1--3e+0At5g20910zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
46.599.91.5Os09g0478900AK107719.1--1e+0At3g49300proline-rich family proteinO.I.C.G.H.G.
46.599.91.0Os01g0930900BI804387-Tropinone reductase homolog (EC 1.1.1.-) (P29X)2e+0Atcg00130-O.I.C.G.H.G.
46.199.90.9Os10g0336600AK062541.1-Hypothetical protein4e+0At5g51720unknown proteinO.I.C.G.H.G.
45.999.90.5Os06g06690509634.m04448--4e-1At5g47050protein binding / zinc ion bindingO.I.C.G.H.G.
45.999.90.1Os09g04267009637.m02241--4e+0At3g26147unknown proteinO.I.C.G.H.G.
45.799.92.3Os01g0148300NM_184360.1--1e-1At5g62210embryo-specific protein-relatedO.I.C.G.H.G.
45.699.90.2Os01g05770009629.m03766--5e+0At4g09970unknown proteinO.I.C.G.H.G.
45.599.91.6Os08g03348309633.m03789--1e+0At1g23860RSZP21 (RS-CONTAINING ZINC FINGER PROTEIN 21)O.I.C.G.H.G.
45.599.90.1Os03g02867009631.m01746--5e-1At1g23350invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
45.199.92.0Os11g01232019639.m00208--3e-1At5g62770unknown proteinO.I.C.G.H.G.
45.199.90.4Os12g0467200AK107289.1-Conserved hypothetical protein2e-2At5g41200AGL75 (AGAMOUS-LIKE 75)O.I.C.G.H.G.
44.999.91.5Os04g0630700AK108022.1-Conserved hypothetical protein3e-1At2g21290unknown proteinO.I.C.G.H.G.
44.499.90.1Os04g04187009632.m03279--3e+0At5g49010SLD5 (SYNTHETIC LETHALITY WITH DPB11-1 5)O.I.C.G.H.G.
44.299.91.7Os04g05511009632.m04487--3e+0At5g02020unknown proteinO.I.C.G.H.G.
44.299.91.1Os08g04179009636.m03224--6e+0At1g52580ATRBL5 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 5)O.I.C.G.H.G.
44.099.96.3Os04g06615009632.m05515--1e+0At3g51644unknown proteinO.I.C.G.H.G.
44.099.92.0Os04g05498009632.m04471--4e-10At2g25820transcription factorO.I.C.G.H.G.
44.099.90.5Os06g02135009634.m01077--9e-3At3g49300proline-rich family proteinO.I.C.G.H.G.
44.099.90.1Os10g01070009638.m00080--7e-8At5g40150peroxidase, putativeO.I.C.G.H.G.
43.999.90.2Os08g0207300AK110728.1-Conserved hypothetical protein4e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.C.G.H.G.
43.999.90.1Os02g02994009630.m01877--1e+0At2g28930APK1BO.I.C.G.H.G.
43.899.94.0Os08g02378009636.m01388-Xyloglucan endotransglycosylase (Fragment)5e-4At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)O.I.C.G.H.G.
43.899.90.2Os11g0504000AF442490.1-Hypothetical protein6e-1At5g42655-O.I.C.G.H.G.
43.799.90.9Os07g0633000NM_193103.1-Conserved hypothetical protein2e+0At2g24762AtGDU4 (Arabidopsis thaliana GLUTAMINE DUMPER 4)O.I.C.G.H.G.
43.699.90.6Os01g07958009629.m05723-Hypothetical protein6e-1At1g20220nucleic acid bindingO.I.C.G.H.G.
43.699.90.6Os05g04937009633.m03879--1e+0At2g21270ubiquitin fusion degradation UFD1 family proteinO.I.C.G.H.G.
43.699.90.4Os06g0126100AK119346.1--8e-18At5g61350protein kinase family proteinO.I.C.G.H.G.
43.599.91.1Os03g0596800AK073603.1-Conserved hypothetical protein3e+0At3g43900unknown proteinO.I.C.G.H.G.
43.599.90.1Os02g08337009630.m05862--1e+0At2g31560unknown proteinO.I.C.G.H.G.
43.499.90.2Os05g03539509633.m02614--6e+0At5g52220-O.I.C.G.H.G.
43.399.90.2Os04g03361009629.m02933--2e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.C.G.H.G.
43.299.91.1Os03g07009009631.m04816--3e+0At1g07175unknown proteinO.I.C.G.H.G.
43.199.92.3Os01g03519009629.m02421--2e+0At2g28500LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)O.I.C.G.H.G.
43.199.90.3Os02g01549009630.m00534--2e+0At1g54420unknown proteinO.I.C.G.H.G.
43.199.90.3Os07g04412009635.m02489--1e+0At3g26450major latex protein-related / MLP-relatedO.I.C.G.H.G.
43.099.92.4Os02g06042009630.m03768--2e+0At5g65925unknown proteinO.I.C.G.H.G.
42.899.90.2Os03g03820009631.m02605--1e+0At4g19270unknown proteinO.I.C.G.H.G.
42.799.90.1Os06g02806009634.m01699--9e-1At3g57500unknown proteinO.I.C.G.H.G.
42.699.92.8Os01g0253700NM_187880.1--4e+0At4g24026unknown proteinO.I.C.G.H.G.
42.599.90.3Os08g0545300AK108562.1-Conserved hypothetical protein9e-3At5g51970sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putativeO.I.C.G.H.G.
42.599.90.2Os01g05498009629.m03487--3e+0At5g03740HD2C (HISTONE DEACETYLASE 2C)O.I.C.G.H.G.
42.599.90.2Os03g01918009631.m00865--2e+0At1g15840unknown proteinO.I.C.G.H.G.
42.499.90.3Os02g05078009630.m02913--6e-1At2g03130ribosomal protein L12 family proteinO.I.C.G.H.G.
42.399.90.2Os02g01321009630.m00297-TPR-like domain containing protein3e-1At3g20210DELTA-VPEO.I.C.G.H.G.
42.299.91.8Os04g02833009632.m01975--6e-3At5g39110germin-like protein, putativeO.I.C.G.H.G.
42.299.90.9Os02g06936019630.m04537--1e-2At4g17520nuclear RNA-binding protein, putativeO.I.C.G.H.G.
42.299.90.7Os04g0480700AK063679.1-Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1)(ARP-2)4e-1At2g30560glycine-rich proteinO.I.C.G.H.G.
42.199.96.4Os03g0103900AK107972.1-Conserved hypothetical protein7e-3At2g21490LEA (DEHYDRIN LEA)O.I.C.G.H.G.
42.199.90.1Os03g0391300AK109877.1-Conserved hypothetical protein8e-8At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.C.G.H.G.
42.199.90.1Os03g06181009631.m04052--4e-2At5g62720integral membrane HPP family proteinO.I.C.G.H.G.
42.099.91.0Os01g03569509629.m02471--1e+0At4g35060heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.C.G.H.G.
42.099.90.1Os06g02843019634.m01754--3e+0At2g27390proline-rich family proteinO.I.C.G.H.G.
41.999.94.7Os05g03235009633.m02325--2e-2At1g61710DC1 domain-containing proteinO.I.C.G.H.G.
41.999.92.5Os12g05870009640.m03875--2e-1At5g34581hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
41.999.91.3Os08g0282200AK107014.1-Conserved hypothetical protein5e+0At5g57565protein kinase family proteinO.I.C.G.H.G.
41.999.90.5Os06g05505009634.m03384--5e-2At1g04560AWPM-19-like membrane family proteinO.I.C.G.H.G.
41.899.90.3Os03g0793300AK108384.1-Expressed protein (Zinc finger-like protein)2e-3At2g29410MTPB1 (METAL TOLERANCE PROTEIN B1)O.I.C.G.H.G.
41.899.90.3Os08g02304009636.m01319--1e+0At5g18540unknown proteinO.I.C.G.H.G.
41.899.90.1Os08g04395009636.m03420--3e-3At5g25750unknown proteinO.I.C.G.H.G.
41.799.90.4Os10g01768009638.m00852--2e-2At5g28630glycine-rich proteinO.I.C.G.H.G.
41.699.92.3Os05g03070009633.m02151-Hypothetical protein5e+0At1g24388unknown proteinO.I.C.G.H.G.
41.699.90.9Os10g01320009638.m00330--2e-2At1g67195MIR414 (MICRORNA 414)O.I.C.G.H.G.
41.599.91.3Os05g01710009633.m00705-Phospholipase D2 (EC 3.1.4.4)1e-22At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.C.G.H.G.
41.499.90.9Os10g0509700AK059482.1-Conserved hypothetical protein6e-1At3g0219060S ribosomal protein L39 (RPL39B)O.I.C.G.H.G.
41.299.939.4Os09g0488100XM_354510.1--4e-1At4g36370unknown proteinO.I.C.G.H.G.
41.299.92.0Os01g0186600AK108138.1-Conserved hypothetical protein2e+0At2g47370-O.I.C.G.H.G.
41.199.90.9Os02g05433009630.m03217-Protein synthesis factor, GTP-binding domaincontaining protein2e-2At3g22980elongation factor Tu family proteinO.I.C.G.H.G.
41.199.90.5Os06g0703300AK105426.1-Protein of unknown function DUF594 family protein1e+0At4g19080unknown proteinO.I.C.G.H.G.
40.999.92.3Os04g05121009632.m04146-CER1-like gene protein (Fragment)3e-5At1g02205CER1 (ECERIFERUM 1)O.I.C.G.H.G.
40.999.90.3Os02g02491009630.m01410-Conserved hypothetical protein4e-3At5g57750zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
40.899.90.6Os01g0100200AK059894.1-Conserved hypothetical protein6e-1At4g16240unknown proteinO.I.C.G.H.G.
40.699.90.4Os08g02710009636.m01706--1e-2At1g04445zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
40.699.90.2Os01g06148009629.m04112--3e-1At5g28630glycine-rich proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage