CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM377073

Assay name Genomic DNA - 45 day old leaf sample - mutant d2943

GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
77.8 99.9 0.1 Os05g0408800 9633.m03125 - - 1e+0 At5g44130 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR) O.I. C.G. H.G.
76.3 99.9 9.8 Os08g0348600 9636.m02614 - - 5e+0 At2g02540 ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21) O.I. C.G. H.G.
75.4 99.9 1.3 Os08g0258900 9636.m01596 - - 1e+0 At5g13460 IQD11 (IQ-domain 11) O.I. C.G. H.G.
73.8 99.9 1.6 Os03g0146200 AK110727.1 - - 2e-28 At3g26520 TIP2 (TONOPLAST INTRINSIC PROTEIN 2) O.I. C.G. H.G.
63.8 99.9 0.2 Os01g0561400 NM_193524.1 - - 9e-1 At1g56010 NAC1 O.I. C.G. H.G.
62.2 99.9 0.1 Os12g0584400 9640.m03851 - - 3e+0 At3g09730 unknown protein O.I. C.G. H.G.
61.6 99.9 1.0 Os09g0251500 AK119343.1 - Protein prenyltransferase domain containingprotein 3e-2 At5g65570 pentatricopeptide (PPR) repeat-containing protein O.I. C.G. H.G.
60.1 99.9 0.4 Os09g0347400 9637.m01525 - - 4e+0 At2g06908 unknown protein O.I. C.G. H.G.
59.9 99.9 0.3 Os08g0282300 9632.m00282 - - 6e-1 At3g30730 unknown protein O.I. C.G. H.G.
59.7 99.9 5.3 Os08g0169100 BI797328 - Hypothetical protein 3e+0 At4g23020 unknown protein O.I. C.G. H.G.
59.2 99.9 0.3 Os05g0247201 9633.m01400 - - 2e+0 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein O.I. C.G. H.G.
57.0 99.9 1.0 Os12g0463200 9640.m02665 - - 1e+1 At4g12350 MYB42 (myb domain protein 42) O.I. C.G. H.G.
56.7 99.9 0.3 Os09g0432400 9637.m02287 - - 1e+0 At4g01670 unknown protein O.I. C.G. H.G.
54.9 99.9 0.2 Os10g0334200 9638.m01572 - - 4e-1 At5g20935 unknown protein O.I. C.G. H.G.
54.8 99.9 0.2 Os08g0309900 9636.m02131 - - 5e-1 At5g54410 unknown protein O.I. C.G. H.G.
54.2 99.9 2.9 Os02g0259700 9630.m01493 - - 2e+0 At1g76910 unknown protein O.I. C.G. H.G.
54.1 99.9 0.5 Os03g0565900 AK100587.1 - Conserved hypothetical protein 6e+0 At5g13470 unknown protein O.I. C.G. H.G.
54.0 99.9 0.3 Os03g0448400 9631.m03293 - - 2e+0 At3g25900 HMT-1 O.I. C.G. H.G.
53.5 99.9 0.1 Os07g0628100 NM_193053.1 - - 2e+1 At5g63400 ADK1 (ADENYLATE KINASE 1) O.I. C.G. H.G.
53.3 99.9 1.4 Os05g0357900 9633.m02655 - - 2e-1 At2g27130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein O.I. C.G. H.G.
52.8 99.9 1.1 Os02g0693601 9630.m04537 - - 1e-2 At4g17520 nuclear RNA-binding protein, putative O.I. C.G. H.G.
52.4 99.9 0.8 Os08g0299900 9636.m02021 - Cyclin-like F-box domain containing protein 2e+0 At1g52390 unknown protein O.I. C.G. H.G.
52.1 99.9 1.4 Os02g0762800 9630.m05178 - SNF2-related domain containing protein 1e-22 At3g19210 ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54) O.I. C.G. H.G.
51.4 99.9 1.5 Os07g0229500 9634.m00501 - - 2e+0 At3g46440 UXS5 O.I. C.G. H.G.
50.9 99.9 0.9 Os09g0104100 9637.m00004 - - 2e+0 At4g35000 APX3 (ASCORBATE PEROXIDASE 3) O.I. C.G. H.G.
50.8 99.9 1.8 Os12g0171500 AK059976.1 - Hypothetical protein 3e+0 At5g13510 ribosomal protein L10 family protein O.I. C.G. H.G.
50.8 99.9 0.1 Os01g0730000 9629.m05148 - - 2e-1 At3g15190 chloroplast 30S ribosomal protein S20, putative O.I. C.G. H.G.
50.5 99.9 1.0 Os12g0486900 AK109689.1 - Protein kinase domain containing protein 3e+0 At3g46410 protein kinase family protein O.I. C.G. H.G.
50.2 99.9 0.7 Os12g0508233 9632.m02182 - - 3e-1 At1g08770 PRA1.E (PRENYLATED RAB ACCEPTOR 1.E) O.I. C.G. H.G.
50.2 99.9 0.4 Os03g0359900 9631.m02392 - - 3e+0 At5g39330 unknown protein O.I. C.G. H.G.
49.6 99.9 4.2 Os08g0310500 9636.m02139 - Conserved hypothetical protein 7e-5 At4g11960 PGRL1B (PGR5-Like B) O.I. C.G. H.G.
49.5 99.9 0.9 Os02g0268600 9630.m01572 - Expansin family protein 4e-4 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) O.I. C.G. H.G.
49.4 99.9 0.4 Os09g0300500 9637.m01020 - - 1e+0 At4g34412 - O.I. C.G. H.G.
49.3 99.9 0.0 Os07g0543400 9635.m03553 - - 3e+0 At2g18350 AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24) O.I. C.G. H.G.
49.2 99.9 0.7 Os05g0549500 9633.m04434 - - 2e+0 At3g21900 receptor-like protein kinase-related O.I. C.G. H.G.
49.1 99.9 1.7 Os11g0105200 9639.m00040 - - 1e-1 At5g11550 binding O.I. C.G. H.G.
48.5 99.9 1.6 Os10g0405500 9638.m02267 - Conserved hypothetical protein 3e-1 At3g48940 remorin family protein O.I. C.G. H.G.
48.3 99.9 2.7 Os04g0681500 AK105582.1 - Calcium-binding EF-hand domain containing protein 2e-1 At4g34870 ROC5 (ROTAMASE CYCLOPHILIN 5) O.I. C.G. H.G.
48.2 99.9 29.6 Os07g0298700 AK106927.1 - Conserved hypothetical protein 9e-1 At1g48380 RHL1 (ROOT HAIRLESS 1) O.I. C.G. H.G.
48.1 99.9 1.3 Os06g0491900 9634.m02845 - - 2e+0 At5g55750 hydroxyproline-rich glycoprotein family protein O.I. C.G. H.G.
47.9 99.9 1.2 Os10g0157000 9638.m00607 - Saposin-like domain containing protein 3e-1 At3g25920 RPL15 O.I. C.G. H.G.
47.4 99.9 1.4 Os10g0439800 9638.m02609 - Cytochrome P450 family protein 1e-2 At3g26180 CYP71B20 O.I. C.G. H.G.
47.4 99.9 0.3 Os02g0468800 AK066711.1 - TPR-like domain containing protein 3e-2 At4g38010 pentatricopeptide (PPR) repeat-containing protein O.I. C.G. H.G.
47.3 99.9 0.9 Os04g0128600 9632.m00298 - - 5e-1 At1g60320 Toll-Interleukin-Resistance (TIR) domain-containing protein O.I. C.G. H.G.
47.3 99.9 0.8 Os04g0167500 9632.m00766 - - 4e-1 At2g01913 unknown protein O.I. C.G. H.G.
47.3 99.9 0.5 Os02g0769750 9630.m05236 - - 7e-1 At1g54960 ANP2 O.I. C.G. H.G.
47.2 99.9 0.4 Os07g0456500 9635.m02638 - Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein 6e-4 At5g47510 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein O.I. C.G. H.G.
47.0 99.9 4.2 Os11g0471300 AK065835.1 - Conserved hypothetical protein 3e-2 At5g60945 - O.I. C.G. H.G.
47.0 99.9 0.3 Os03g0138300 9631.m00367 - - 6e-1 At5g42380 CML37 (CALMODULIN LIKE 37) O.I. C.G. H.G.
47.0 99.9 0.1 Os08g0405300 9636.m03127 - - 7e-1 At5g11910 esterase/lipase/thioesterase family protein O.I. C.G. H.G.
46.8 99.9 1.0 Os07g0506233 9635.m03171 - - 5e-1 At1g75800 pathogenesis-related thaumatin family protein O.I. C.G. H.G.
46.7 99.9 1.3 Os01g0937400 AK069827.1 - Disease resistance protein family protein 3e-1 At1g01840 unknown protein O.I. C.G. H.G.
46.7 99.9 1.0 Os02g0155000 AK106999.1 - Hypothetical protein 1e+0 At3g27999 enzyme inhibitor/ pectinesterase O.I. C.G. H.G.
46.7 99.9 0.5 Os09g0292625 9637.m00926 - - 3e-1 At3g57230 AGL16 (AGAMOUS-LIKE 16) O.I. C.G. H.G.
46.7 99.9 0.4 Os03g0119100 AK069519.1 - Phospholipase D beta 2 8e-27 At2g42010 PLDBETA1 (PHOSPHOLIPASE D BETA 1) O.I. C.G. H.G.
46.6 99.9 0.6 Os01g0320100 9629.m02078 - - 2e-1 At3g50150 unknown protein O.I. C.G. H.G.
46.5 99.9 1.3 Os12g0205500 AK072670.1 - Disease resistance protein family protein 4e-4 At3g60080 zinc finger (C3HC4-type RING finger) family protein O.I. C.G. H.G.
46.3 99.9 1.2 Os01g0349800 AK069610.1 - Cytochrome P450 family protein 9e-4 At2g46950 CYP709B2 O.I. C.G. H.G.
46.3 99.9 1.2 Os08g0552200 AK120301.1 - Conserved hypothetical protein 3e-1 At5g51410 LUC7 N_terminus domain-containing protein O.I. C.G. H.G.
46.3 99.9 0.6 Os08g0102600 9636.m00021 - - 3e-1 At3g26400 EIF4B1 O.I. C.G. H.G.
46.2 99.9 2.6 Os02g0298200 AK108666.1 - - 3e-1 At3g55550 lectin protein kinase, putative O.I. C.G. H.G.
46.2 99.9 0.3 Os08g0551300 9636.m04455 - Arabidopsis conserved protein family protein 2e-2 At1g80180 unknown protein O.I. C.G. H.G.
46.1 99.9 2.0 Os04g0420400 9632.m03297 - S-locus glycoprotein family protein 6e-2 At2g19130 S-locus lectin protein kinase family protein O.I. C.G. H.G.
46.1 99.9 0.6 Os09g0117900 9637.m00135 - - 3e+0 At5g11440 CID5 O.I. C.G. H.G.
46.1 99.9 0.1 Os03g0122033 9631.m00210 - - 4e-1 At5g09805 IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3) O.I. C.G. H.G.
46.0 99.9 0.6 Os11g0546400 9639.m03097 - - 5e-2 At2g40475 unknown protein O.I. C.G. H.G.
45.9 99.9 1.7 Os08g0131000 AK067165.1 - TPR-like domain containing protein 5e-3 At2g03380 pentatricopeptide (PPR) repeat-containing protein O.I. C.G. H.G.
45.9 99.9 0.0 Os02g0107900 9630.m00081 - - 1e-4 At3g47780 ATATH6 O.I. C.G. H.G.
45.2 99.9 1.1 Os12g0503300 9640.m03090 - Allantoin permease 2e-4 At1g26440 ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5) O.I. C.G. H.G.
45.1 99.9 1.7 Os07g0117000 AU030486 - NB-ARC domain containing protein 3e+0 At5g30341 unknown protein O.I. C.G. H.G.
44.9 99.9 0.4 Os09g0387400 9637.m01894 - - 2e+0 At3g52300 ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL) O.I. C.G. H.G.
44.8 99.9 1.1 Os02g0590100 9630.m03617 - Esterase/lipase/thioesterase domain containingprotein 8e+0 At5g43380 TOPP6 O.I. C.G. H.G.
44.8 99.9 0.7 Os12g0134600 AK109609.1 - - 3e+0 At5g44860 unknown protein O.I. C.G. H.G.
44.5 99.9 0.9 Os02g0503800 9630.m02877 - Cytochrome P450 family protein 2e-4 At4g37330 CYP81D4 O.I. C.G. H.G.
44.4 99.9 1.5 Os12g0195500 9640.m00874 - - 1e-1 At2g35640 hydroxyproline-rich glycoprotein family protein O.I. C.G. H.G.
44.3 99.9 1.7 Os05g0214400 9633.m01099 - Esterase/lipase/thioesterase domain containingprotein 4e-4 At5g41850 unknown protein O.I. C.G. H.G.
44.2 99.9 1.1 Os12g0131500 9640.m00289 - Disease resistance protein family protein 3e-1 At1g17610 disease resistance protein-related O.I. C.G. H.G.
44.1 99.9 0.1 Os07g0436200 9635.m02442 - - 1e+0 At5g08270 unknown protein O.I. C.G. H.G.
44.0 99.9 1.5 Os02g0811200 9630.m05621 - EGF-like calcium-binding domain containing protein 1e-3 At1g21250 WAK1 (CELL WALL-ASSOCIATED KINASE) O.I. C.G. H.G.
44.0 99.9 0.8 Os11g0598900 9639.m03509 - TPR-like domain containing protein 2e+0 At5g41850 unknown protein O.I. C.G. H.G.
43.8 99.9 1.9 Os02g0582300 AK101861.1 - TPR-like domain containing protein 4e-1 At5g53960 ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) O.I. C.G. H.G.
43.8 99.9 1.1 Os11g0513600 9639.m02853 - - 2e+0 At5g49820 emb1879 (embryo defective 1879) O.I. C.G. H.G.
43.7 99.9 0.7 Os02g0834350 9630.m05870 - - 4e-1 At1g35614 unknown protein O.I. C.G. H.G.
43.7 99.9 0.4 Os03g0614600 9631.m04025 - - 2e+0 At1g08465 YAB2 (YABBY2) O.I. C.G. H.G.
43.6 99.9 0.9 Os06g0297100 9634.m01867 - - 9e-1 At3g54950 PLA IIIA (PATATIN-LIKE PROTEIN 6) O.I. C.G. H.G.
43.5 99.9 0.2 Os05g0548500 9633.m04422 - - 2e-3 At2g47000 ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) O.I. C.G. H.G.
43.3 99.9 1.2 Os11g0175300 AK072817.1 - Hypothetical protein 2e-1 At1g53035 unknown protein O.I. C.G. H.G.
43.3 99.9 0.7 Os12g0454725 9640.m02582 - - 3e+0 At3g59680 unknown protein O.I. C.G. H.G.
43.2 99.9 0.9 Os10g0132000 9638.m00330 - - 2e-2 At1g67195 MIR414 (MICRORNA 414) O.I. C.G. H.G.
43.2 99.9 0.8 Os07g0189400 AK106788.1 - Cyclin-like F-box domain containing protein 1e-3 At5g08150 unknown protein O.I. C.G. H.G.
43.2 99.9 0.7 Os05g0359100 9633.m02668 - - 4e-1 At1g51355 unknown protein O.I. C.G. H.G.
43.1 99.9 0.8 Os04g0290200 9632.m02058 - - 6e+0 At5g18748 unknown protein O.I. C.G. H.G.
43.1 99.9 0.5 Os12g0461400 9640.m02669 - - 2e-1 At1g35500 unknown protein O.I. C.G. H.G.
43.0 99.9 2.1 Os03g0110900 9631.m00109 - Conserved hypothetical protein 4e-4 At3g55630 ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D) O.I. C.G. H.G.
43.0 99.9 0.7 Os10g0204000 9638.m01203 - Conserved hypothetical protein 1e+0 At4g05070 unknown protein O.I. C.G. H.G.
43.0 99.9 0.3 Os08g0346100 9636.m02531 - - 8e+0 At5g46871 - O.I. C.G. H.G.
42.9 99.9 1.3 Os01g0894100 AK111398.1 - Transposase (Fragment) 2e-1 At3g60270 uclacyanin, putative O.I. C.G. H.G.
42.9 99.9 0.7 Os04g0327300 9632.m02452 - - 7e-1 At1g75860 unknown protein O.I. C.G. H.G.
42.8 99.9 19.3 Os04g0111700 9632.m00113 - - 1e+0 At3g25100 CDC45 (cell division cycle 45) O.I. C.G. H.G.
42.8 99.9 4.4 Os06g0285500 AK073666.1 - Hypothetical protein 5e+0 At5g44930 ARAD2 (ARABINAN DEFICIENT 2) O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
77.8	99.9	0.1	Os05g0408800	9633.m03125	-	-	1e+0	At5g44130	FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)	O.I.	C.G.	H.G.
76.3	99.9	9.8	Os08g0348600	9636.m02614	-	-	5e+0	At2g02540	ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21)	O.I.	C.G.	H.G.
75.4	99.9	1.3	Os08g0258900	9636.m01596	-	-	1e+0	At5g13460	IQD11 (IQ-domain 11)	O.I.	C.G.	H.G.
73.8	99.9	1.6	Os03g0146200	AK110727.1	-	-	2e-28	At3g26520	TIP2 (TONOPLAST INTRINSIC PROTEIN 2)	O.I.	C.G.	H.G.
63.8	99.9	0.2	Os01g0561400	NM_193524.1	-	-	9e-1	At1g56010	NAC1	O.I.	C.G.	H.G.
62.2	99.9	0.1	Os12g0584400	9640.m03851	-	-	3e+0	At3g09730	unknown protein	O.I.	C.G.	H.G.
61.6	99.9	1.0	Os09g0251500	AK119343.1	-	Protein prenyltransferase domain containingprotein	3e-2	At5g65570	pentatricopeptide (PPR) repeat-containing protein	O.I.	C.G.	H.G.
60.1	99.9	0.4	Os09g0347400	9637.m01525	-	-	4e+0	At2g06908	unknown protein	O.I.	C.G.	H.G.
59.9	99.9	0.3	Os08g0282300	9632.m00282	-	-	6e-1	At3g30730	unknown protein	O.I.	C.G.	H.G.
59.7	99.9	5.3	Os08g0169100	BI797328	-	Hypothetical protein	3e+0	At4g23020	unknown protein	O.I.	C.G.	H.G.
59.2	99.9	0.3	Os05g0247201	9633.m01400	-	-	2e+0	At4g16160	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	C.G.	H.G.
57.0	99.9	1.0	Os12g0463200	9640.m02665	-	-	1e+1	At4g12350	MYB42 (myb domain protein 42)	O.I.	C.G.	H.G.
56.7	99.9	0.3	Os09g0432400	9637.m02287	-	-	1e+0	At4g01670	unknown protein	O.I.	C.G.	H.G.
54.9	99.9	0.2	Os10g0334200	9638.m01572	-	-	4e-1	At5g20935	unknown protein	O.I.	C.G.	H.G.
54.8	99.9	0.2	Os08g0309900	9636.m02131	-	-	5e-1	At5g54410	unknown protein	O.I.	C.G.	H.G.
54.2	99.9	2.9	Os02g0259700	9630.m01493	-	-	2e+0	At1g76910	unknown protein	O.I.	C.G.	H.G.
54.1	99.9	0.5	Os03g0565900	AK100587.1	-	Conserved hypothetical protein	6e+0	At5g13470	unknown protein	O.I.	C.G.	H.G.
54.0	99.9	0.3	Os03g0448400	9631.m03293	-	-	2e+0	At3g25900	HMT-1	O.I.	C.G.	H.G.
53.5	99.9	0.1	Os07g0628100	NM_193053.1	-	-	2e+1	At5g63400	ADK1 (ADENYLATE KINASE 1)	O.I.	C.G.	H.G.
53.3	99.9	1.4	Os05g0357900	9633.m02655	-	-	2e-1	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.
52.8	99.9	1.1	Os02g0693601	9630.m04537	-	-	1e-2	At4g17520	nuclear RNA-binding protein, putative	O.I.	C.G.	H.G.
52.4	99.9	0.8	Os08g0299900	9636.m02021	-	Cyclin-like F-box domain containing protein	2e+0	At1g52390	unknown protein	O.I.	C.G.	H.G.
52.1	99.9	1.4	Os02g0762800	9630.m05178	-	SNF2-related domain containing protein	1e-22	At3g19210	ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54)	O.I.	C.G.	H.G.
51.4	99.9	1.5	Os07g0229500	9634.m00501	-	-	2e+0	At3g46440	UXS5	O.I.	C.G.	H.G.
50.9	99.9	0.9	Os09g0104100	9637.m00004	-	-	2e+0	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	O.I.	C.G.	H.G.
50.8	99.9	1.8	Os12g0171500	AK059976.1	-	Hypothetical protein	3e+0	At5g13510	ribosomal protein L10 family protein	O.I.	C.G.	H.G.
50.8	99.9	0.1	Os01g0730000	9629.m05148	-	-	2e-1	At3g15190	chloroplast 30S ribosomal protein S20, putative	O.I.	C.G.	H.G.
50.5	99.9	1.0	Os12g0486900	AK109689.1	-	Protein kinase domain containing protein	3e+0	At3g46410	protein kinase family protein	O.I.	C.G.	H.G.
50.2	99.9	0.7	Os12g0508233	9632.m02182	-	-	3e-1	At1g08770	PRA1.E (PRENYLATED RAB ACCEPTOR 1.E)	O.I.	C.G.	H.G.
50.2	99.9	0.4	Os03g0359900	9631.m02392	-	-	3e+0	At5g39330	unknown protein	O.I.	C.G.	H.G.
49.6	99.9	4.2	Os08g0310500	9636.m02139	-	Conserved hypothetical protein	7e-5	At4g11960	PGRL1B (PGR5-Like B)	O.I.	C.G.	H.G.
49.5	99.9	0.9	Os02g0268600	9630.m01572	-	Expansin family protein	4e-4	At2g39700	ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)	O.I.	C.G.	H.G.
49.4	99.9	0.4	Os09g0300500	9637.m01020	-	-	1e+0	At4g34412	-	O.I.	C.G.	H.G.
49.3	99.9	0.0	Os07g0543400	9635.m03553	-	-	3e+0	At2g18350	AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24)	O.I.	C.G.	H.G.
49.2	99.9	0.7	Os05g0549500	9633.m04434	-	-	2e+0	At3g21900	receptor-like protein kinase-related	O.I.	C.G.	H.G.
49.1	99.9	1.7	Os11g0105200	9639.m00040	-	-	1e-1	At5g11550	binding	O.I.	C.G.	H.G.
48.5	99.9	1.6	Os10g0405500	9638.m02267	-	Conserved hypothetical protein	3e-1	At3g48940	remorin family protein	O.I.	C.G.	H.G.
48.3	99.9	2.7	Os04g0681500	AK105582.1	-	Calcium-binding EF-hand domain containing protein	2e-1	At4g34870	ROC5 (ROTAMASE CYCLOPHILIN 5)	O.I.	C.G.	H.G.
48.2	99.9	29.6	Os07g0298700	AK106927.1	-	Conserved hypothetical protein	9e-1	At1g48380	RHL1 (ROOT HAIRLESS 1)	O.I.	C.G.	H.G.
48.1	99.9	1.3	Os06g0491900	9634.m02845	-	-	2e+0	At5g55750	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	H.G.
47.9	99.9	1.2	Os10g0157000	9638.m00607	-	Saposin-like domain containing protein	3e-1	At3g25920	RPL15	O.I.	C.G.	H.G.
47.4	99.9	1.4	Os10g0439800	9638.m02609	-	Cytochrome P450 family protein	1e-2	At3g26180	CYP71B20	O.I.	C.G.	H.G.
47.4	99.9	0.3	Os02g0468800	AK066711.1	-	TPR-like domain containing protein	3e-2	At4g38010	pentatricopeptide (PPR) repeat-containing protein	O.I.	C.G.	H.G.
47.3	99.9	0.9	Os04g0128600	9632.m00298	-	-	5e-1	At1g60320	Toll-Interleukin-Resistance (TIR) domain-containing protein	O.I.	C.G.	H.G.
47.3	99.9	0.8	Os04g0167500	9632.m00766	-	-	4e-1	At2g01913	unknown protein	O.I.	C.G.	H.G.
47.3	99.9	0.5	Os02g0769750	9630.m05236	-	-	7e-1	At1g54960	ANP2	O.I.	C.G.	H.G.
47.2	99.9	0.4	Os07g0456500	9635.m02638	-	Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein	6e-4	At5g47510	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	O.I.	C.G.	H.G.
47.0	99.9	4.2	Os11g0471300	AK065835.1	-	Conserved hypothetical protein	3e-2	At5g60945	-	O.I.	C.G.	H.G.
47.0	99.9	0.3	Os03g0138300	9631.m00367	-	-	6e-1	At5g42380	CML37 (CALMODULIN LIKE 37)	O.I.	C.G.	H.G.
47.0	99.9	0.1	Os08g0405300	9636.m03127	-	-	7e-1	At5g11910	esterase/lipase/thioesterase family protein	O.I.	C.G.	H.G.
46.8	99.9	1.0	Os07g0506233	9635.m03171	-	-	5e-1	At1g75800	pathogenesis-related thaumatin family protein	O.I.	C.G.	H.G.
46.7	99.9	1.3	Os01g0937400	AK069827.1	-	Disease resistance protein family protein	3e-1	At1g01840	unknown protein	O.I.	C.G.	H.G.
46.7	99.9	1.0	Os02g0155000	AK106999.1	-	Hypothetical protein	1e+0	At3g27999	enzyme inhibitor/ pectinesterase	O.I.	C.G.	H.G.
46.7	99.9	0.5	Os09g0292625	9637.m00926	-	-	3e-1	At3g57230	AGL16 (AGAMOUS-LIKE 16)	O.I.	C.G.	H.G.
46.7	99.9	0.4	Os03g0119100	AK069519.1	-	Phospholipase D beta 2	8e-27	At2g42010	PLDBETA1 (PHOSPHOLIPASE D BETA 1)	O.I.	C.G.	H.G.
46.6	99.9	0.6	Os01g0320100	9629.m02078	-	-	2e-1	At3g50150	unknown protein	O.I.	C.G.	H.G.
46.5	99.9	1.3	Os12g0205500	AK072670.1	-	Disease resistance protein family protein	4e-4	At3g60080	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.
46.3	99.9	1.2	Os01g0349800	AK069610.1	-	Cytochrome P450 family protein	9e-4	At2g46950	CYP709B2	O.I.	C.G.	H.G.
46.3	99.9	1.2	Os08g0552200	AK120301.1	-	Conserved hypothetical protein	3e-1	At5g51410	LUC7 N_terminus domain-containing protein	O.I.	C.G.	H.G.
46.3	99.9	0.6	Os08g0102600	9636.m00021	-	-	3e-1	At3g26400	EIF4B1	O.I.	C.G.	H.G.
46.2	99.9	2.6	Os02g0298200	AK108666.1	-	-	3e-1	At3g55550	lectin protein kinase, putative	O.I.	C.G.	H.G.
46.2	99.9	0.3	Os08g0551300	9636.m04455	-	Arabidopsis conserved protein family protein	2e-2	At1g80180	unknown protein	O.I.	C.G.	H.G.
46.1	99.9	2.0	Os04g0420400	9632.m03297	-	S-locus glycoprotein family protein	6e-2	At2g19130	S-locus lectin protein kinase family protein	O.I.	C.G.	H.G.
46.1	99.9	0.6	Os09g0117900	9637.m00135	-	-	3e+0	At5g11440	CID5	O.I.	C.G.	H.G.
46.1	99.9	0.1	Os03g0122033	9631.m00210	-	-	4e-1	At5g09805	IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)	O.I.	C.G.	H.G.
46.0	99.9	0.6	Os11g0546400	9639.m03097	-	-	5e-2	At2g40475	unknown protein	O.I.	C.G.	H.G.
45.9	99.9	1.7	Os08g0131000	AK067165.1	-	TPR-like domain containing protein	5e-3	At2g03380	pentatricopeptide (PPR) repeat-containing protein	O.I.	C.G.	H.G.
45.9	99.9	0.0	Os02g0107900	9630.m00081	-	-	1e-4	At3g47780	ATATH6	O.I.	C.G.	H.G.
45.2	99.9	1.1	Os12g0503300	9640.m03090	-	Allantoin permease	2e-4	At1g26440	ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)	O.I.	C.G.	H.G.
45.1	99.9	1.7	Os07g0117000	AU030486	-	NB-ARC domain containing protein	3e+0	At5g30341	unknown protein	O.I.	C.G.	H.G.
44.9	99.9	0.4	Os09g0387400	9637.m01894	-	-	2e+0	At3g52300	ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)	O.I.	C.G.	H.G.
44.8	99.9	1.1	Os02g0590100	9630.m03617	-	Esterase/lipase/thioesterase domain containingprotein	8e+0	At5g43380	TOPP6	O.I.	C.G.	H.G.
44.8	99.9	0.7	Os12g0134600	AK109609.1	-	-	3e+0	At5g44860	unknown protein	O.I.	C.G.	H.G.
44.5	99.9	0.9	Os02g0503800	9630.m02877	-	Cytochrome P450 family protein	2e-4	At4g37330	CYP81D4	O.I.	C.G.	H.G.
44.4	99.9	1.5	Os12g0195500	9640.m00874	-	-	1e-1	At2g35640	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	H.G.
44.3	99.9	1.7	Os05g0214400	9633.m01099	-	Esterase/lipase/thioesterase domain containingprotein	4e-4	At5g41850	unknown protein	O.I.	C.G.	H.G.
44.2	99.9	1.1	Os12g0131500	9640.m00289	-	Disease resistance protein family protein	3e-1	At1g17610	disease resistance protein-related	O.I.	C.G.	H.G.
44.1	99.9	0.1	Os07g0436200	9635.m02442	-	-	1e+0	At5g08270	unknown protein	O.I.	C.G.	H.G.
44.0	99.9	1.5	Os02g0811200	9630.m05621	-	EGF-like calcium-binding domain containing protein	1e-3	At1g21250	WAK1 (CELL WALL-ASSOCIATED KINASE)	O.I.	C.G.	H.G.
44.0	99.9	0.8	Os11g0598900	9639.m03509	-	TPR-like domain containing protein	2e+0	At5g41850	unknown protein	O.I.	C.G.	H.G.
43.8	99.9	1.9	Os02g0582300	AK101861.1	-	TPR-like domain containing protein	4e-1	At5g53960	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	O.I.	C.G.	H.G.
43.8	99.9	1.1	Os11g0513600	9639.m02853	-	-	2e+0	At5g49820	emb1879 (embryo defective 1879)	O.I.	C.G.	H.G.
43.7	99.9	0.7	Os02g0834350	9630.m05870	-	-	4e-1	At1g35614	unknown protein	O.I.	C.G.	H.G.
43.7	99.9	0.4	Os03g0614600	9631.m04025	-	-	2e+0	At1g08465	YAB2 (YABBY2)	O.I.	C.G.	H.G.
43.6	99.9	0.9	Os06g0297100	9634.m01867	-	-	9e-1	At3g54950	PLA IIIA (PATATIN-LIKE PROTEIN 6)	O.I.	C.G.	H.G.
43.5	99.9	0.2	Os05g0548500	9633.m04422	-	-	2e-3	At2g47000	ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)	O.I.	C.G.	H.G.
43.3	99.9	1.2	Os11g0175300	AK072817.1	-	Hypothetical protein	2e-1	At1g53035	unknown protein	O.I.	C.G.	H.G.
43.3	99.9	0.7	Os12g0454725	9640.m02582	-	-	3e+0	At3g59680	unknown protein	O.I.	C.G.	H.G.
43.2	99.9	0.9	Os10g0132000	9638.m00330	-	-	2e-2	At1g67195	MIR414 (MICRORNA 414)	O.I.	C.G.	H.G.
43.2	99.9	0.8	Os07g0189400	AK106788.1	-	Cyclin-like F-box domain containing protein	1e-3	At5g08150	unknown protein	O.I.	C.G.	H.G.
43.2	99.9	0.7	Os05g0359100	9633.m02668	-	-	4e-1	At1g51355	unknown protein	O.I.	C.G.	H.G.
43.1	99.9	0.8	Os04g0290200	9632.m02058	-	-	6e+0	At5g18748	unknown protein	O.I.	C.G.	H.G.
43.1	99.9	0.5	Os12g0461400	9640.m02669	-	-	2e-1	At1g35500	unknown protein	O.I.	C.G.	H.G.
43.0	99.9	2.1	Os03g0110900	9631.m00109	-	Conserved hypothetical protein	4e-4	At3g55630	ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D)	O.I.	C.G.	H.G.
43.0	99.9	0.7	Os10g0204000	9638.m01203	-	Conserved hypothetical protein	1e+0	At4g05070	unknown protein	O.I.	C.G.	H.G.
43.0	99.9	0.3	Os08g0346100	9636.m02531	-	-	8e+0	At5g46871	-	O.I.	C.G.	H.G.
42.9	99.9	1.3	Os01g0894100	AK111398.1	-	Transposase (Fragment)	2e-1	At3g60270	uclacyanin, putative	O.I.	C.G.	H.G.
42.9	99.9	0.7	Os04g0327300	9632.m02452	-	-	7e-1	At1g75860	unknown protein	O.I.	C.G.	H.G.
42.8	99.9	19.3	Os04g0111700	9632.m00113	-	-	1e+0	At3g25100	CDC45 (cell division cycle 45)	O.I.	C.G.	H.G.
42.8	99.9	4.4	Os06g0285500	AK073666.1	-	Hypothetical protein	5e+0	At5g44930	ARAD2 (ARABINAN DEFICIENT 2)	O.I.	C.G.	H.G.

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GSM ID	GSM377073
Assay name	Genomic DNA - 45 day old leaf sample - mutant d2943
GSE experiment	GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Microarray experiments to specifically-expressed genes

GSM ID GSM377073 Assay name Genomic DNA - 45 day old leaf sample - mutant d2943 GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

GSM ID GSM377073

Assay name Genomic DNA - 45 day old leaf sample - mutant d2943

GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays