Microarray experiments to specifically-expressed genes

GSM ID GSM377071
Assay name Genomic DNA - 45 day old leaf sample - mutant d256
GSE experiment GSE15071: Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
149.0100.00.2Os12g04401009640.m02421--8e-1At2g25890glycine-rich protein / oleosinO.I.C.G.H.G.
115.3100.00.0Os11g01190009639.m00171--4e+0At1g14200zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
99.0100.00.0Os12g04829669640.m02873--5e-1At5g65320basic helix-loop-helix (bHLH) family proteinO.I.C.G.H.G.
81.799.90.1Os04g0550300AK107520.1-Hypothetical protein7e+0At5g56452-O.I.C.G.H.G.
81.499.90.9Os11g05904009639.m03431-Disease resistance protein family protein3e-1At3g12960unknown proteinO.I.C.G.H.G.
78.999.90.2Os01g05729009629.m03725--1e+0At2g18620geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putativeO.I.C.G.H.G.
76.999.90.3Os01g09259009629.m06928--3e+0At5g13220JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)O.I.C.G.H.G.
72.399.90.1Os12g04806009640.m02854--6e+0At3g48220unknown proteinO.I.C.G.H.G.
71.799.90.2Os12g04819009640.m02867--2e-2At2g25190unknown proteinO.I.C.G.H.G.
68.899.90.1Os09g0295200AK073072.1-Hypothetical protein6e+0Atcg01090-O.I.C.G.H.G.
65.599.99.1Os01g03324009629.m02206--2e-1At1g15820LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)O.I.C.G.H.G.
65.399.90.2Os08g01341009636.m00325--2e+0At5g66140PAD2 (PROTEASOME ALPHA SUBUNIT D 2)O.I.C.G.H.G.
64.799.90.5Os05g04497009633.m03485--5e+0At5g03944unknown proteinO.I.C.G.H.G.
63.099.90.1Os12g04681009640.m02715--5e+0At4g40060ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)O.I.C.G.H.G.
62.299.91.1Os10g01584009638.m00620-Chalcone synthase J (EC 2.3.1.74)(Naringenin-chalcone synthase J)9e+0At5g0480040S ribosomal protein S17 (RPS17D)O.I.C.G.H.G.
61.899.90.0Os05g03536009633.m02609-Glutaredoxin domain containing protein6e+0At2g37000TCP family transcription factor, putativeO.I.C.G.H.G.
61.199.92.0Os12g04771009640.m02820-Disease resistance protein family protein8e-2At5g62240unknown proteinO.I.C.G.H.G.
60.399.90.3Os08g04887009636.m03836-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein1e+0At1g03660-O.I.C.G.H.G.
58.599.99.3Os08g03211019636.m02254--5e+0At1g76750unknown proteinO.I.C.G.H.G.
58.399.90.8Os10g0321500NM_195665.1--2e-3At4g30670unknown proteinO.I.C.G.H.G.
57.899.90.4Os02g0568100AK107582.1-Hypothetical protein1e-9At5g64330NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3)O.I.C.G.H.G.
57.499.90.6Os07g0566500AK063406.1-No apical meristem (NAM) protein domain containingprotein1e-3At3g15510ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)O.I.C.G.H.G.
57.099.90.2Os07g02661009635.m01624--6e+0At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)O.I.C.G.H.G.
56.999.91.0Os11g06085009639.m03602--1e+0At4g16750DRE-binding transcription factor, putativeO.I.C.G.H.G.
56.899.90.2Os11g0593600AK071707.1-Cyclin-like F-box domain containing protein1e+1At5g62165AGL42 (AGAMOUS LIKE 42)O.I.C.G.H.G.
55.599.90.0Os03g0749050CB654192--4e-1At5g4876060S ribosomal protein L13A (RPL13aD)O.I.C.G.H.G.
55.299.91.0Os10g0117400NM_194615.1--5e-1At3g22620protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
55.199.91.4Os05g0316400AK108681.1-Hypothetical protein2e-1At5g53970aminotransferase, putativeO.I.C.G.H.G.
54.799.90.2Os07g0663500NM_186051.1-Short-chain dehydrogenase/reductase SDR familyprotein7e+0At5g39630vesicle transport v-SNARE family proteinO.I.C.G.H.G.
54.699.90.0Os10g01557669638.m00591--1e-1At5g45040cytochrome c6 (ATC6)O.I.C.G.H.G.
54.599.91.4Os08g04194009636.m03236--3e-1At5g28630glycine-rich proteinO.I.C.G.H.G.
54.499.90.9Os11g0660700AK063723.1-Hypothetical protein5e+0At5g47030ATP synthase delta' chain, mitochondrialO.I.C.G.H.G.
54.299.90.5Os08g05481009636.m04426--2e+0At1g56010NAC1O.I.C.G.H.G.
53.299.90.3Os04g06333009632.m05253-S-locus glycoprotein family protein3e-7At4g21380ARK3 (A. THALIANA RECEPTOR KINASE 3)O.I.C.G.H.G.
53.199.90.6Os05g0555000AK119287.1-Conserved hypothetical protein5e-1At5g37690GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
53.199.90.3Os04g03052009632.m02234--6e-1At1g64000WRKY56O.I.C.G.H.G.
52.799.91.0Os01g0390600AK119355.1-TPR-like domain containing protein4e-7At4g02750pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
52.799.90.3Os06g03460009634.m02343--7e-2At1g75550glycine-rich proteinO.I.C.G.H.G.
52.699.90.1Os04g03972019632.m03109--2e-8At4g38620MYB4O.I.C.G.H.G.
52.299.90.1Os01g0499100AK119423.1-Conserved hypothetical protein6e+0At5g28491unknown proteinO.I.C.G.H.G.
51.799.93.1Os10g0153000NM_194892.1--2e+0At5g38610invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
51.799.90.2Os09g0573100AK121232.1-Ubiquitin domain containing protein5e-2At5g22390unknown proteinO.I.C.G.H.G.
51.199.93.0Os03g0231300AK110646.1-Hypothetical protein5e-1At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)O.I.C.G.H.G.
50.999.90.7Os03g04167009631.m02967--1e+0At1g31140agl63 (AGAMOUS-LIKE 63)O.I.C.G.H.G.
50.999.90.0Os12g04400009640.m02420--2e+0At1g01990-O.I.C.G.H.G.
50.399.90.2Os12g04676009640.m02707--2e+0At5g47180vesicle-associated membrane family protein / VAMP family proteinO.I.C.G.H.G.
50.199.97.0Os03g0161701NM_188901.1--2e+0At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)O.I.C.G.H.G.
50.099.90.5Os12g0156100AK109534.1-NAC-domain containing protein 90 (ANAC090)6e-1At1g54330ANAC020 (Arabidopsis NAC domain containing protein 20)O.I.C.G.H.G.
49.799.90.7Os05g04937009633.m03879--1e+0At2g21270ubiquitin fusion degradation UFD1 family proteinO.I.C.G.H.G.
49.599.910.5Os01g0383300NM_193933.1--2e-1At2g23310ATRER1C1O.I.C.G.H.G.
49.599.94.4Os02g05701009638.m02481--4e+1At5g63480unknown proteinO.I.C.G.H.G.
49.299.90.3Os11g02014609632.m03116--3e+0At5g02060integral membrane protein, putativeO.I.C.G.H.G.
49.199.90.4Os05g0324200AK108151.1-Hypothetical protein2e+0At1g05300ZIP5O.I.C.G.H.G.
48.999.93.7Os10g03830009632.m01656--5e+0At4g31875unknown proteinO.I.C.G.H.G.
48.499.91.6Os03g08088009631.m05848--2e-1At5g42040RPN12b (Regulatory Particle Non-ATPase 12b)O.I.C.G.H.G.
47.999.91.3Os02g08004509630.m05537--3e+0At3g21680unknown proteinO.I.C.G.H.G.
47.999.90.3Os05g0531700AK110982.1-Hypothetical protein4e+0At5g35100peptidyl-prolyl cis-trans isomeraseO.I.C.G.H.G.
47.899.90.9Os06g03651009634.m02575--6e-2At5g53220unknown proteinO.I.C.G.H.G.
47.899.90.3Os03g04338259631.m03145--5e-1At2g4059040S ribosomal protein S26 (RPS26B)O.I.C.G.H.G.
47.799.90.5Os02g05440009630.m03230--8e-1At5g65320basic helix-loop-helix (bHLH) family proteinO.I.C.G.H.G.
47.699.90.5Os06g0141800AK107277.1-Conserved hypothetical protein6e-1At3g49300proline-rich family proteinO.I.C.G.H.G.
47.599.90.8Os12g04413009640.m02431-O-methyltransferase, family 2 protein8e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
47.599.90.5Os07g0537200CA763700-Serine/threonine protein kinase family protein4e-3At4g04510protein kinase family proteinO.I.C.G.H.G.
47.599.90.1Os05g0169500AK120872.1--7e-1At3g01160unknown proteinO.I.C.G.H.G.
47.499.90.3Os03g02366009631.m01264--6e-1At5g23395-O.I.C.G.H.G.
47.199.91.9Os02g01513009630.m00500-Endo-1,4-beta-glucanase (EC 3.2.1.4) (Fragment)9e-6At2g32990AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8)O.I.C.G.H.G.
47.099.90.4Os01g02721009629.m01650--7e+0At3g11260WOX5 (WUSCHEL RELATED HOMEOBOX 5)O.I.C.G.H.G.
46.999.90.6Os02g05044009630.m02885--7e-1At4g27310zinc finger (B-box type) family proteinO.I.C.G.H.G.
46.899.90.5Os08g04467009636.m03481--3e+0At3g05180GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
46.799.90.9Os06g05663009634.m03522-Zinc transporter ZIP family protein3e-1At1g10970ZIP4 (ZINC TRANSPORTER 4 PRECURSOR)O.I.C.G.H.G.
46.699.91.1Os01g02987009629.m01887--3e+0At4g11870unknown proteinO.I.C.G.H.G.
46.699.90.5Os05g01544009633.m00543--9e-3At3g10040transcription factorO.I.C.G.H.G.
46.399.91.6Os11g06330009639.m03814--3e+0At5g35375unknown proteinO.I.C.G.H.G.
46.299.90.2Os09g03829009637.m01852--7e-1At2g27370integral membrane family proteinO.I.C.G.H.G.
46.199.90.5Os06g04945509634.m02867--4e+0At5g03070IMPA-9 (IMPORTIN ALPHA ISOFORM 9)O.I.C.G.H.G.
46.199.90.2Os06g06842009634.m04579--4e+0At2g02390ATGSTZ1 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE ZETA 1)O.I.C.G.H.G.
46.099.90.7Os01g0386500AK106513.1-Hypothetical protein9e-1At2g22100RNA recognition motif (RRM)-containing proteinO.I.C.G.H.G.
45.899.910.1Os06g0267200AK103070.1-Conserved hypothetical protein3e+0At1g56220dormancy/auxin associated family proteinO.I.C.G.H.G.
45.899.90.7Os07g0407600NM_185249.1--8e-1At3g03826unknown proteinO.I.C.G.H.G.
45.799.913.0Os01g0536800NM_197046.1--8e-3Atmg00300-O.I.C.G.H.G.
45.599.90.2Os11g0504000AF442490.1-Hypothetical protein6e-1At5g42655-O.I.C.G.H.G.
45.499.90.4Os08g02724009636.m01722--6e-1At4g11140CRF1 (CYTOKININ RESPONSE FACTOR 1)O.I.C.G.H.G.
45.199.92.4Os12g0114400AK070552.1-TPR-like domain containing protein1e-4At3g13770pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
45.199.90.5Os12g02967009640.m01986--9e-3At3g29070protein transmembrane transporterO.I.C.G.H.G.
45.199.90.1Os01g03100009629.m01985--8e+0At5g16160unknown proteinO.I.C.G.H.G.
45.099.90.2Os12g04453009640.m02475-O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)3e+0At5g09650AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6)O.I.C.G.H.G.
44.899.90.9Os12g02670489640.m01626--3e+0At1g70400-O.I.C.G.H.G.
44.899.90.8Os01g0667000NM_191922.1--2e+0At1g16810unknown proteinO.I.C.G.H.G.
44.799.90.0Os10g0333450NM_195785.1--2e-1At5g44570unknown proteinO.I.C.G.H.G.
44.699.90.5Os10g05476009638.m03622--2e-1At5g62820integral membrane protein, putativeO.I.C.G.H.G.
44.599.90.3Os02g02610009630.m01505-Harpin-induced 1 domain containing protein2e+0At5g11890-O.I.C.G.H.G.
44.499.90.2Os02g04845409630.m02692--4e-1At5g20630GER3 (GERMIN 3)O.I.C.G.H.G.
44.399.93.3Os07g0255200AK062290.1--8e-1At5g63460SAP domain-containing proteinO.I.C.G.H.G.
44.299.91.2Os01g0680500AK069325.1-Conserved hypothetical protein6e-2At3g29075glycine-rich proteinO.I.C.G.H.G.
44.299.90.1Os01g0634450NM_192958.1--3e+0At5g52400CYP715A1O.I.C.G.H.G.
44.199.96.9Os03g0605150XM_353935.1--5e+0At5g28660-O.I.C.G.H.G.
44.199.91.5Os07g06306009635.m04381--2e+0At3g49270unknown proteinO.I.C.G.H.G.
44.199.90.3Os11g04835009639.m02651--9e-1At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)O.I.C.G.H.G.
44.199.90.1Os06g0268600AK109608.1-Hypothetical protein7e-2Atmg01190-O.I.C.G.H.G.
44.099.91.7Os06g0351601AK063020.1--8e+0At5g37910seven in absentia (SINA) family proteinO.I.C.G.H.G.



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