Microarray experiments to specifically-expressed genes

GSM ID GSM328563
Assay name Populus x canescens root hypoxia_rep_05
GSE experiment GSE13109: Effect of hypoxia on gene expression in Grey poplar

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
68.9100.02.6PtpAffx.55376.1.S1_atAY953377.1hypothetical protein-6e-1At5g58390peroxidase, putativeO.I.C.G.H.G.
50.5100.00.5PtpAffx.154690.2.S1_atBU893573hypothetical protein-5e-1At3g04660F-box family proteinO.I.C.G.H.G.
46.2100.01.0PtpAffx.28103.1.S1_atCV230387hypothetical protein-4e-1At4g39250ATRL1 (ARABIDOPSIS RAD-LIKE 1)O.I.C.G.H.G.
46.1100.00.9Ptp.3631.1.S1_atBU895422thioredoxin-like protein-2e-2At1g11530ATCXXS1 (C-terminal cysteine residue is changed to a serine 1)O.I.C.G.H.G.
45.9100.00.4PtpAffx.66774.1.S1_atCK095626--9e-12At1g77380AAP3O.I.C.G.H.G.
42.3100.00.1PtpAffx.225336.1.S1_s_atpmrna44618hypothetical protein-2e-4At1g05650polygalacturonase, putative / pectinase, putativeO.I.C.G.H.G.
32.899.90.3PtpAffx.22552.1.S1_atDN487171hypothetical protein-2e+0At5g18300anac088 (Arabidopsis NAC domain containing protein 88)O.I.C.G.H.G.
32.799.91.6Ptp.3333.2.A1_atCX658805--2e-12At1g63940monodehydroascorbate reductase, putativeO.I.C.G.H.G.
31.699.91.9PtpAffx.52100.1.A1_atCK097825hypothetical protein-1e-16At5g25250-O.I.C.G.H.G.
30.599.91.6PtpAffx.5251.1.A1_s_atCV255918hypothetical protein-5e-7At2g25680MOT1 (molybdate transporter 1)O.I.C.G.H.G.
27.699.91.0PtpAffx.221266.1.S1_atpmrna38026hypothetical protein-2e+0At4g18510CLE2 (CLAVATA3/ESR-RELATED)O.I.C.G.H.G.
24.899.912.3PtpAffx.5595.1.A1_s_atCK104765hypothetical protein-6e-1At2g18480mannitol transporter, putativeO.I.C.G.H.G.
24.699.80.7Ptp.2877.1.A1_atDN493127hypothetical protein-2e-2At2g25680MOT1 (molybdate transporter 1)O.I.C.G.H.G.
24.399.80.3PtpAffx.103892.1.S1_a_atCB239724hypothetical protein-4e+0At4g21310unknown proteinO.I.C.G.H.G.
23.899.80.0Ptp.8130.1.S1_atDN492539--9e-2At5g39240unknown proteinO.I.C.G.H.G.
23.399.80.0PtpAffx.224227.1.S1_atpmrna42589hypothetical protein-1e+0At3g45590ATSEN1 (SPLICING ENDONUCLEASE 1)O.I.C.G.H.G.
23.299.858.3Ptp.1044.1.S1_atCF235854hypothetical protein-3e-33At4g05390ATRFNR1 (ROOT FNR 1)O.I.C.G.H.G.
22.899.81.7PtpAffx.192.1.S1_atDN487464hypothetical protein-2e+1At5g60190Ulp1 protease family proteinO.I.C.G.H.G.
22.499.83.7PtpAffx.29632.1.S1_atCX654220--2e-3At3g18080BGLU44 (B-S GLUCOSIDASE 44)O.I.C.G.H.G.
22.499.82.4PtpAffx.212132.1.S1_s_atpmrna23792hypothetical protein-3e-1At1g69170squamosa promoter-binding protein-like 6 (SPL6)O.I.C.G.H.G.
22.099.84.9PtpAffx.203851.1.S1_atpmrna7601hypothetical protein-3e-3At1g28680transferase family proteinO.I.C.G.H.G.
20.999.892.3Ptp.5713.2.S1_a_atAJ557585.1high affinity nitrate transporter-7e-6At5g60770ATNRT2.4O.I.C.G.H.G.
20.599.80.0PtpAffx.218240.1.S1_atpmrna33792hypothetical protein-5e+0At5g66010RNA binding / nucleic acid binding / nucleotide bindingO.I.C.G.H.G.
20.199.712.8PtpAffx.224747.1.S1_atpmrna43570hypothetical protein-2e-4At1g16905sugar bindingO.I.C.G.H.G.
20.199.70.0PtpAffx.204226.1.S1_atpmrna8311hypothetical protein-8e-9At2g21610pectinesterase family proteinO.I.C.G.H.G.
20.099.78.7PtpAffx.205052.1.S1_atpmrna10006hypothetical protein-3e-8At5g60520late embryogenesis abundant protein-related / LEA protein-relatedO.I.C.G.H.G.
19.899.70.2PtpAffx.223323.1.S1_atpmrna41259hypothetical protein-5e-3At4g19380alcohol oxidase-relatedO.I.C.G.H.G.
19.799.70.1PtpAffx.35134.1.S1_atDN503292--4e+0At5g20430mob1/phocein family proteinO.I.C.G.H.G.
19.599.723.4PtpAffx.132698.2.S1_atCX655024--3e-4At2g24980proline-rich extensin-like family proteinO.I.C.G.H.G.
19.599.70.8Ptp.6239.1.S1_atDN490661hypothetical protein-4e-8At1g55020LOX1O.I.C.G.H.G.
19.499.70.4PtpAffx.202047.1.S1_atpmrna4081hypothetical protein-6e+0At5g06280unknown proteinO.I.C.G.H.G.
19.299.70.0PtpAffx.215156.1.S1_atpmrna29194ammonium transporter-6e-2At1g64780ATAMT1O.I.C.G.H.G.
19.199.70.0PtpAffx.208947.1.S1_atpmrna17728cytokinin biosynthetic isopentenyltransferase-3e-5At1g68460ATIPT1 (isopentenyltransferase 1)O.I.C.G.H.G.
18.899.70.1PtpAffx.121004.1.A1_atCV257398hypothetical protein-6e-3At2g47140short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
18.899.70.1PtpAffx.208992.1.S1_atpmrna17820hypothetical protein-1e-1At1g13470unknown proteinO.I.C.G.H.G.
18.699.75.7PtpAffx.203851.1.S1_s_atpmrna7601hypothetical protein-3e-3At1g28680transferase family proteinO.I.C.G.H.G.
18.599.720.2PtpAffx.62585.1.A1_atCV273954--5e-3At4g20410GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)O.I.C.G.H.G.
18.499.70.7PtpAffx.11626.1.A1_a_atCV227545hypothetical protein-4e-35At2g06925PLA2-ALPHAO.I.C.G.H.G.
18.499.70.3Ptp.3624.1.S1_atDN492629--3e-9At4g32480unknown proteinO.I.C.G.H.G.
18.499.70.2PtpAffx.207505.1.S1_atpmrna14908hypothetical protein-4e-18At5g04970pectinesterase, putativeO.I.C.G.H.G.
18.199.70.2PtpAffx.222600.1.S1_atpmrna40132hypothetical protein-6e-1Atmg00200-O.I.C.G.H.G.
18.199.70.0PtpAffx.9579.1.S1_atDN487886hypothetical protein-3e-2At4g37850basic helix-loop-helix (bHLH) family proteinO.I.C.G.H.G.
18.099.70.0PtpAffx.205127.1.S1_s_atpmrna10151cytochrome P450 /// hypothetical protein-3e-6At4g32170CYP96A2O.I.C.G.H.G.
17.699.70.2PtpAffx.12329.1.A1_atDN488471hypothetical protein-3e-2At5g65030unknown proteinO.I.C.G.H.G.
17.599.617.3PtpAffx.4070.3.S1_atCX655364hypothetical protein-3e-3At3g54400aspartyl protease family proteinO.I.C.G.H.G.
17.399.60.2PtpAffx.212418.1.S1_atpmrna24323hypothetical protein-4e-1At1g69030-O.I.C.G.H.G.
17.299.60.0PtpAffx.222528.1.S1_atpmrna40030hypothetical protein-1e+1At5g47670NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)O.I.C.G.H.G.
17.099.60.5PtpAffx.68974.1.A1_atCV276005hypothetical protein-7e-1At4g26950unknown proteinO.I.C.G.H.G.
17.099.60.1PtpAffx.212958.1.S1_atpmrna25356--3e-1At3g16700fumarylacetoacetate hydrolase family proteinO.I.C.G.H.G.
17.099.60.1PtpAffx.219850.1.S1_x_atpmrna35999hypothetical protein-3e-1At1g67520lectin protein kinase family proteinO.I.C.G.H.G.
16.899.60.6PtpAffx.202325.1.S1_atpmrna4655hypothetical protein-6e-15At4g01630ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17)O.I.C.G.H.G.
16.799.60.1PtpAffx.204411.1.S1_atpmrna8665hypothetical protein-1e-15At2g27370integral membrane family proteinO.I.C.G.H.G.
16.699.60.2PtpAffx.212514.1.S1_s_atpmrna24509hypothetical protein-2e-4At1g06330copper-binding family proteinO.I.C.G.H.G.
16.499.629.3Ptp.7170.1.S1_s_atDN497999hypothetical protein-1e+0At1g69760unknown proteinO.I.C.G.H.G.
16.499.64.8PtpAffx.146472.1.A1_atCV275539hypothetical protein-1e+0At2g03110RNA binding / nucleic acid bindingO.I.C.G.H.G.
16.499.60.7Ptp.2979.1.S1_atDN488465hypothetical protein-5e-4At1g68500unknown proteinO.I.C.G.H.G.
16.299.60.0PtpAffx.219544.1.S1_s_atpmrna35492cc-nbs-lrr resistance protein /// cc-nbs-lrr resistance protein-1e+0At5g65280GCL1 (GCR2-LIKE 1)O.I.C.G.H.G.
16.099.667.6PtpAffx.1257.3.A1_atCA934446hypothetical protein-4e-4At1g62500protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
16.099.60.3Ptp.7126.1.S1_atDN499762hypothetical protein-5e-1At4g03140binding / catalytic/ oxidoreductaseO.I.C.G.H.G.
16.099.60.2PtpAffx.218538.1.S1_atpmrna34197hypothetical protein-3e-1At5g55340long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.C.G.H.G.
15.999.61.4PtpAffx.134601.1.A1_atCV229617--2e-1At4g25760AtGDU2 (Arabidopsis thaliana GLUTAMINE DUMPER 2)O.I.C.G.H.G.
15.999.60.1PtpAffx.225285.1.S1_atpmrna44526hypothetical protein-5e-1At2g03770sulfotransferase family proteinO.I.C.G.H.G.
15.999.60.0PtpAffx.220699.1.S1_atpmrna37111hypothetical protein-3e+0At3g62770AtATG18aO.I.C.G.H.G.
15.899.627.1Ptp.7170.1.S1_atDN497999hypothetical protein-1e+0At1g69760unknown proteinO.I.C.G.H.G.
15.899.60.0Ptp.3686.1.S1_atBU871638hypothetical protein-3e-1Atmg01080-O.I.C.G.H.G.
15.799.63.8PtpAffx.9889.1.A1_atBP931052hypothetical protein-1e+0At2g43520ATTI2O.I.C.G.H.G.
15.699.50.8PtpAffx.208712.1.S1_atpmrna17276high affinity inorganic phosphate transporter-2e-11At5g43350PHT1O.I.C.G.H.G.
15.399.50.0PtpAffx.149264.1.S1_atCF231887--1e-1At2g34925CLE42 (CLAVATA3/ESR-RELATED 42)O.I.C.G.H.G.
15.299.51.8Ptp.3781.1.S1_atDN498839hypothetical protein-2e-10At3g49940LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38)O.I.C.G.H.G.
15.099.510.1Ptp.3837.2.S1_atCA927405hypothetical protein-3e-18At3g47340ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)O.I.C.G.H.G.
14.999.55.3Ptp.7635.1.S1_atDN484289hypothetical protein-1e-14At1g02810pectinesterase family proteinO.I.C.G.H.G.
14.899.50.6PtpAffx.214599.1.S1_atpmrna28372auxin efflux carrier component-5e-27At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)O.I.C.G.H.G.
14.899.50.0PtpAffx.216058.1.S1_atpmrna30618hypothetical protein-5e-1At4g10330glycine-rich proteinO.I.C.G.H.G.
14.799.50.1PtpAffx.128848.1.S1_atCX170978--3e-5At3g63200PLP9 (PATATIN-LIKE PROTEIN 9)O.I.C.G.H.G.
14.799.50.1PtpAffx.223719.1.S1_s_atpmrna41867hypothetical protein-2e-6At1g06330copper-binding family proteinO.I.C.G.H.G.
14.699.54.2PtpAffx.37311.1.A1_atCV256718hypothetical protein-3e-11At5g44380FAD-binding domain-containing proteinO.I.C.G.H.G.
14.599.546.2PtpAffx.10405.5.S1_atDN493379--8e-1At5g1520040S ribosomal protein S9 (RPS9B)O.I.C.G.H.G.
14.499.55.0Ptp.2155.1.S1_atBU825802--1e+0At1g30135JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)O.I.C.G.H.G.
14.499.50.0PtpAffx.200110.1.S1_atpmrna195glycosyl transferase family 37-3e-15At2g03210FUT2 (FUCOSYLTRANSFERASE 2)O.I.C.G.H.G.
14.399.537.8Ptp.1517.1.S1_atCK089318--2e-7At4g27450unknown proteinO.I.C.G.H.G.
14.399.50.6PtpAffx.86678.1.S1_atDN495015hypothetical protein-3e-1At1g69270RPK1 (RECEPTOR-LIKE PROTEIN KINASE 1)O.I.C.G.H.G.
14.399.50.0PtpAffx.215994.1.S1_atpmrna30496hypothetical protein-4e-17At1g09030NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT B4)O.I.C.G.H.G.
14.399.50.0PtpAffx.224599.1.S1_atpmrna43282pho1-like protein-1e-37At1g68740EXS family protein / ERD1/XPR1/SYG1 family proteinO.I.C.G.H.G.
14.299.5150.8PtpAffx.7819.1.S1_atCV273112hypothetical protein-2e-3At5g50200WR3 (WOUND-RESPONSIVE 3)O.I.C.G.H.G.
14.299.50.0PtpAffx.212480.1.S1_atpmrna24447hypothetical protein-5e-3At4g12690unknown proteinO.I.C.G.H.G.
14.199.421.7Ptp.163.1.S1_atCK089074caffeic acid 3-O-methyltransferase-2e-15At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.C.G.H.G.
14.199.40.1PtpAffx.217928.1.S1_atpmrna33394cytochrome P450-3e-31At1g73340electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingO.I.C.G.H.G.
13.899.417.7Ptp.7695.1.S1_s_atBU862504hypothetical protein-2e-2At5g02020unknown proteinO.I.C.G.H.G.
13.899.40.9PtpAffx.209357.1.S1_atpmrna18531hypothetical protein-5e-1At2g39430disease resistance-responsive protein-related / dirigent protein-relatedO.I.C.G.H.G.
13.899.40.1PtpAffx.217262.1.S1_atpmrna32453hypothetical protein-6e-1At5g38050unknown proteinO.I.C.G.H.G.
13.799.46.5Ptp.3033.1.A1_s_atDN498061--9e-8At3g47520MDH (MALATE DEHYDROGENASE)O.I.C.G.H.G.
13.799.40.1PtpAffx.207798.1.S1_atpmrna15500AP2 domain-containing transcription factor-4e-77At5g17430BBM (BABY BOOM)O.I.C.G.H.G.
13.699.44.6Ptp.4219.1.S1_atAY665682.1polyphenol oxidase-3e-1At3g62820invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
13.699.40.3PtpAffx.3528.2.S1_atDN487037hypothetical protein-3e-11At1g03090MCCAO.I.C.G.H.G.
13.699.40.0PtpAffx.203742.1.S1_atpmrna7396hypothetical protein-2e+0At5g4854033 kDa secretory protein-relatedO.I.C.G.H.G.
13.699.40.0PtpAffx.56200.1.A1_atCV273917--3e-1At2g11910unknown proteinO.I.C.G.H.G.
13.599.4109.0Ptp.3978.1.S1_atCX656376--3e-12At2g37130peroxidase 21 (PER21) (P21) (PRXR5)O.I.C.G.H.G.
13.599.424.3Ptp.10.1.A1_atCK087557hypothetical protein-4e-1At1g37130NIA2 (NITRATE REDUCTASE 2)O.I.C.G.H.G.
13.599.40.6PtpAffx.76779.1.S1_atCX180181hypothetical protein-1e-22At2g25680MOT1 (molybdate transporter 1)O.I.C.G.H.G.
13.599.40.2PtpAffx.21166.1.S1_atDN488413hypothetical protein-2e+0At5g27450MK (MEVALONATE KINASE)O.I.C.G.H.G.



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