Microarray experiments to specifically-expressed genes

GSM ID GSM328484
Assay name Populus x canescens root hypoxia_rep_01
GSE experiment GSE13109: Effect of hypoxia on gene expression in Grey poplar

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
59.0100.01.2PtpAffx.201513.1.S1_atpmrna2978hypothetical protein-9e-2At5g44568unknown proteinO.I.C.G.H.G.
45.0100.021.6PtpAffx.154011.1.A1_atCV232859hypothetical protein-5e-14At3g27220kelch repeat-containing proteinO.I.C.G.H.G.
44.8100.02.9PtpAffx.205866.1.S1_atpmrna11628hypothetical protein-1e-1At5g38060unknown proteinO.I.C.G.H.G.
42.3100.00.3PtpAffx.117451.1.S1_atDN492327--6e+0At5g40600unknown proteinO.I.C.G.H.G.
41.5100.00.3PtpAffx.207573.1.S1_atpmrna15030hypothetical protein-5e-1At1g75500nodulin MtN21 family proteinO.I.C.G.H.G.
39.9100.020.2Ptp.6442.1.S1_atBU868019hypothetical protein-2e-5At4g17260L-lactate dehydrogenase, putativeO.I.C.G.H.G.
37.3100.07.3PtpAffx.8996.1.S1_atCK091767hypothetical protein-2e+0At4g05010F-box family proteinO.I.C.G.H.G.
37.1100.09.6PtpAffx.211464.1.S1_atpmrna22471hypothetical protein-5e+0At4g29470phospholipase A2, putativeO.I.C.G.H.G.
36.9100.00.0PtpAffx.203414.1.S1_atpmrna6794hypothetical protein-7e-5At2g03830unknown proteinO.I.C.G.H.G.
36.8100.00.0PtpAffx.211408.1.S1_atpmrna22358hypothetical protein-3e+0At2g42210mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.C.G.H.G.
35.9100.00.6PtpAffx.27422.1.S1_x_atBU892225hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)O.I.C.G.H.G.
35.5100.00.6PtpAffx.27422.1.S1_atBU892225hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)O.I.C.G.H.G.
34.299.92.3PtpAffx.16889.1.S1_atCV239404hypothetical protein-4e-2At4g01680MYB55 (myb domain protein 55)O.I.C.G.H.G.
33.999.94.6PtpAffx.208951.1.S1_atpmrna17738hypothetical protein-6e-14At1g68510LBD42 (LOB DOMAIN-CONTAINING PROTEIN 42)O.I.C.G.H.G.
33.699.944.2PtpAffx.201017.1.S1_atpmrna1995hypothetical protein-2e-13At3g27220kelch repeat-containing proteinO.I.C.G.H.G.
33.399.92.1PtpAffx.163665.1.S1_s_atBU813254hypothetical protein-3e-5At5g62280unknown proteinO.I.C.G.H.G.
33.299.9135.1PtpAffx.74927.2.S1_a_atCV244564hypothetical protein-7e-3At1g67100LBD40 (LOB DOMAIN-CONTAINING PROTEIN 40)O.I.C.G.H.G.
33.199.98.6PtpAffx.202401.1.S1_s_atpmrna4824hypothetical protein-2e-1At5g20920EIF2 BETAO.I.C.G.H.G.
32.299.91.1PtpAffx.213716.1.S1_atpmrna26766hypothetical protein-2e-8At5g01830armadillo/beta-catenin repeat family protein / U-box domain-containing proteinO.I.C.G.H.G.
30.999.94.5PtpAffx.27616.1.S1_atDN491669hypothetical protein-4e-5At1g20190ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)O.I.C.G.H.G.
30.999.93.8PtpAffx.153303.1.A1_atCV260981hypothetical protein-3e-1At4g27580unknown proteinO.I.C.G.H.G.
30.899.93.4PtpAffx.163890.1.S1_atCK094532--9e+0At3g04790ribose 5-phosphate isomerase-relatedO.I.C.G.H.G.
30.399.930.3PtpAffx.158679.1.S1_atCX654069hypothetical protein-3e-2At5g05790myb family transcription factorO.I.C.G.H.G.
30.399.94.7Ptp.4130.1.S1_s_atCX167925hypothetical protein-3e-1At5g39530unknown proteinO.I.C.G.H.G.
30.299.90.2PtpAffx.150443.1.S1_atDN499465hypothetical protein-4e-7At3g27220kelch repeat-containing proteinO.I.C.G.H.G.
29.899.913.2Ptp.3954.2.S1_atCV268320hypothetical protein-6e-18At1g64980unknown proteinO.I.C.G.H.G.
29.899.95.8PtpAffx.80839.1.S1_atCV267772hypothetical protein-7e-60At4g24160hydrolase, alpha/beta fold family proteinO.I.C.G.H.G.
29.599.924.0Ptp.7650.2.A1_atDN488603hypothetical protein-4e+0At3g20395protein binding / zinc ion bindingO.I.C.G.H.G.
29.499.926.1PtpAffx.14721.1.S1_atCX656596hypothetical protein-5e+0At4g28775unknown proteinO.I.C.G.H.G.
29.299.937.6Ptp.4102.2.A1_a_atCV256358--5e-13At4g17260L-lactate dehydrogenase, putativeO.I.C.G.H.G.
29.299.930.6PtpAffx.32843.1.S1_atCF228684--2e+0At2g40270protein kinase family proteinO.I.C.G.H.G.
29.199.95.6Ptp.7169.1.S1_atDN497988--6e-2At4g16610zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
28.499.90.2PtpAffx.205105.1.S1_s_atpmrna10107hypothetical protein-4e+0At5g63905unknown proteinO.I.C.G.H.G.
28.199.93.2PtpAffx.19956.1.S1_atCK096932hypothetical protein-2e-17At5g65140trehalose-6-phosphate phosphatase, putativeO.I.C.G.H.G.
27.899.90.0PtpAffx.119179.1.A1_atDN488584hypothetical protein-3e-2At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)O.I.C.G.H.G.
27.299.90.7Ptp.6990.1.S1_atDN489040hypothetical protein-1e+0At5g66816unknown proteinO.I.C.G.H.G.
27.299.90.0PtpAffx.208715.1.S1_atpmrna17281AP2/ERF domain-containing transcription factor-3e-4At3g23230ethylene-responsive factor, putativeO.I.C.G.H.G.
27.199.950.7PtpAffx.2179.1.S1_atCV244812NAC domain protein, IPR003441-2e-20At5g08790ATAF2O.I.C.G.H.G.
27.199.90.8Ptp.988.1.A1_atCK089913hypothetical protein-3e+0At4g12380unknown proteinO.I.C.G.H.G.
26.799.90.3PtpAffx.60663.1.S1_atBI125675--3e+0At4g03620myosin heavy chain-relatedO.I.C.G.H.G.
26.699.939.2Ptp.2733.1.S1_atDN492339--1e+1At5g09230SRT2 (SIRTUIN 2)O.I.C.G.H.G.
26.599.90.0PtpAffx.212251.1.S1_atpmrna24014hypothetical protein-2e-26At1g26780myb family transcription factor (MYB117)O.I.C.G.H.G.
26.499.90.6PtpAffx.142471.1.A1_atCK095710--2e+0At4g16930disease resistance protein (TIR-NBS-LRR class), putativeO.I.C.G.H.G.
26.399.922.6PtpAffx.18307.1.S1_atCV253713--1e+0At5g28610-O.I.C.G.H.G.
26.099.9126.7PtpAffx.2120.1.S1_atCV259911--8e-5At4g10265wound-responsive protein, putativeO.I.C.G.H.G.
25.799.90.1PtpAffx.56651.2.S1_atBU834782hypothetical protein-1e-4At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)O.I.C.G.H.G.
25.499.97.1PtpAffx.91597.1.S1_atDN496124hypothetical protein-1e+0At4g31860protein phosphatase 2C, putative / PP2C, putativeO.I.C.G.H.G.
25.499.92.0PtpAffx.150981.1.S1_atCA826039hypothetical protein-1e+0At5g65740protein binding / zinc ion bindingO.I.C.G.H.G.
25.499.90.2PtpAffx.121024.1.A1_atCV240122hypothetical protein-1e-1At5g62480ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)O.I.C.G.H.G.
25.299.930.8Ptp.5925.2.S1_atCK113192hypothetical protein-2e-2At1g60730aldo/keto reductase family proteinO.I.C.G.H.G.
24.999.90.4PtpAffx.206846.1.S1_atpmrna13591hypothetical protein-9e-19At5g10820integral membrane transporter family proteinO.I.C.G.H.G.
24.899.90.4PtpAffx.201183.1.S1_atpmrna2343hypothetical protein-2e-25At2g14820NPY2 (NAKED PINS IN YUC MUTANTS 2)O.I.C.G.H.G.
24.799.80.2PtpAffx.204984.1.S1_atpmrna9872hypothetical protein-9e-1At1g69210unknown proteinO.I.C.G.H.G.
24.599.828.9PtpAffx.215169.1.S1_s_atpmrna29211hypothetical protein-7e-4At4g34135UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2)O.I.C.G.H.G.
24.499.827.8PtpAffx.206422.1.S1_s_atpmrna12755hypothetical protein-1e-2At2g35930PUB23 (PLANT U-BOX 23)O.I.C.G.H.G.
24.499.80.7Ptp.3816.1.S1_s_atBU863984hypothetical protein-3e-1At1g18440peptidyl-tRNA hydrolase family proteinO.I.C.G.H.G.
24.099.80.9Ptp.2843.1.S1_atDN485484hypothetical protein-7e-9At1g01500unknown proteinO.I.C.G.H.G.
23.899.814.8PtpAffx.223327.1.S1_atpmrna41264hypothetical protein-1e-39At4g19230CYP707A1O.I.C.G.H.G.
23.899.811.5PtpAffx.20988.1.S1_atCV245916--3e-2At2g04039unknown proteinO.I.C.G.H.G.
23.799.860.8PtpAffx.110205.1.S1_atCF234168hypothetical protein-1e+0At1g72930TIR (TOLL/INTERLEUKIN-1 RECEPTOR-LIKE)O.I.C.G.H.G.
23.599.80.0PtpAffx.18295.5.S1_atCK114049hypothetical protein-1e-19At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.C.G.H.G.
23.499.8106.9Ptp.3954.1.S1_a_atBP936963hypothetical protein-3e-52At1g64980unknown proteinO.I.C.G.H.G.
23.499.80.0PtpAffx.206284.1.S1_atpmrna12453hypothetical protein-2e-1At3g03760LBD20 (LOB DOMAIN-CONTAINING PROTEIN 20)O.I.C.G.H.G.
23.399.80.1PtpAffx.209603.1.S1_atpmrna18991hypothetical protein-5e-1At3g06030ANP3 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 3)O.I.C.G.H.G.
22.599.80.0PtpAffx.24552.1.A1_atCV256156--9e+0At5g09240transcriptional coactivator p15 (PC4) family proteinO.I.C.G.H.G.
22.599.80.0PtpAffx.54776.1.A1_atDN488170hypothetical protein-4e-1At1g73650oxidoreductase, acting on the CH-CH group of donorsO.I.C.G.H.G.
22.099.80.0PtpAffx.572.1.S1_atCK111156AP2 domain-containing transcription factor-4e-6At1g68840RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)O.I.C.G.H.G.
21.999.81.1Ptp.5317.1.S1_s_atBU832693hypothetical protein-2e-15At5g47390myb family transcription factorO.I.C.G.H.G.
21.899.80.6PtpAffx.203018.1.S1_atpmrna5967hypothetical protein-2e-26At4g16563aspartyl protease family proteinO.I.C.G.H.G.
21.699.83.1PtpAffx.161948.1.A1_atCK092884hypothetical protein-1e+0At1g27695glycine-rich proteinO.I.C.G.H.G.
21.699.82.2PtpAffx.153114.1.A1_atCV269422--4e+0At5g05430-O.I.C.G.H.G.
21.599.825.6PtpAffx.29592.1.S1_atCV278968hypothetical protein-1e-38At1g72280AERO1 (Arabidopsis endoplasmic reticulum oxidoreductins 1)O.I.C.G.H.G.
21.299.872.8PtpAffx.2120.2.S1_a_atCK097107hypothetical protein-6e-5At4g10270wound-responsive family proteinO.I.C.G.H.G.
20.999.826.5PtpAffx.9589.1.S1_atCV243148hypothetical protein-6e-2At4g16240unknown proteinO.I.C.G.H.G.
20.999.81.2PtpAffx.211786.1.S1_atpmrna23119hypothetical protein-3e+0At5g44578unknown proteinO.I.C.G.H.G.
20.899.80.0PtpAffx.221996.1.S1_atpmrna39179hypothetical protein-5e-9At2g18550HB-2 (HOMEOBOX-2)O.I.C.G.H.G.
20.599.824.7PtpAffx.2120.3.S1_atCF232315hypothetical protein-2e-6At4g10265wound-responsive protein, putativeO.I.C.G.H.G.
20.599.823.0PtpAffx.10586.1.S1_atBP930543hypothetical protein-1e-26At1g80840WRKY40O.I.C.G.H.G.
20.499.81.6PtpAffx.200456.1.S1_atpmrna918AP2/ERF domain-containing transcription factor-3e-7At5g51990CBF4 (C- REPEAT-BINDING FACTOR 4)O.I.C.G.H.G.
20.499.80.1PtpAffx.223442.1.S1_s_atpmrna41455hypothetical protein-7e-29At3g26932DRB3 (dsRNA-binding protein 3)O.I.C.G.H.G.
20.399.88.9Ptp.6648.1.S1_atBU866161--2e-2At4g33050EDA39 (embryo sac development arrest 39)O.I.C.G.H.G.
20.399.80.9PtpAffx.27422.2.A1_atCA934579hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)O.I.C.G.H.G.
20.299.81.6PtpAffx.210875.1.S1_atpmrna21356hypothetical protein-5e-7At1g09155AtPP2-B15 (Phloem protein 2-B15)O.I.C.G.H.G.
20.299.80.0PtpAffx.134518.1.A1_atCV232852SAUR family protein-9e-2At2g21210auxin-responsive protein, putativeO.I.C.G.H.G.
20.199.71.3PtpAffx.221953.1.S1_s_atpmrna39083aquaporin, MIP family, PIP subfamily-2e-9At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)O.I.C.G.H.G.
20.099.71.0Ptp.6044.1.S1_a_atCF936914hypothetical protein-5e-4At3g05550hypoxia-responsive family proteinO.I.C.G.H.G.
19.999.70.3PtpAffx.210674.1.S1_atpmrna20932SAUR family protein-1e+0At1g20590cyclin, putativeO.I.C.G.H.G.
19.799.70.1PtpAffx.145237.1.A1_atBP936078AP2/ERF domain-containing transcription factor-6e-2At3g30220unknown proteinO.I.C.G.H.G.
19.699.716.9PtpAffx.212237.1.S1_x_atpmrna23990hypothetical protein-2e+1At5g19230unknown proteinO.I.C.G.H.G.
19.699.73.1PtpAffx.87145.1.A1_atBP935672--3e-16At4g35100PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3)O.I.C.G.H.G.
19.699.70.9Ptp.2979.1.S1_atDN488465hypothetical protein-5e-4At1g68500unknown proteinO.I.C.G.H.G.
19.599.7133.8PtpAffx.212776.1.S1_atpmrna25004hypothetical protein-2e-3At3g47720SRO4 (SIMILAR TO RCD ONE 4)O.I.C.G.H.G.
19.499.78.5Ptp.2235.2.A1_a_atCV243071hypothetical protein-9e-2At5g67520adenylylsulfate kinase, putativeO.I.C.G.H.G.
19.499.72.2PtpAffx.209141.1.S1_atpmrna18095argonaute protein group-2e-21At1g69440AGO7 (ARGONAUTE7)O.I.C.G.H.G.
19.499.72.1PtpAffx.10586.2.S1_atCV239110hypothetical protein-3e-28At1g80840WRKY40O.I.C.G.H.G.
19.499.70.0PtpAffx.217901.1.S1_atpmrna33351hypothetical protein-4e-4At2g29470ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3)O.I.C.G.H.G.
19.399.722.5PtpAffx.205848.1.S1_atpmrna11587hypothetical protein-2e-33At1g20270oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.H.G.
19.299.70.4PtpAffx.135937.1.A1_atCK095720hypothetical protein-3e-1At5g61810mitochondrial substrate carrier family proteinO.I.C.G.H.G.
19.199.779.3PtpAffx.8917.1.S1_atCK109849hypothetical protein-1e+0At4g12825-O.I.C.G.H.G.
19.099.726.2Ptp.7067.1.S1_atCV273308hypothetical protein-4e-2At1g27730STZ (salt tolerance zinc finger)O.I.C.G.H.G.



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