Microarray experiments to specifically-expressed genes

GSM ID GSM328284
Assay name Populus x canescens root control_rep_03
GSE experiment GSE13109: Effect of hypoxia on gene expression in Grey poplar

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
34.299.90.7PtpAffx.13201.1.S1_atCV256148hypothetical protein-4e-23At5g23760heavy-metal-associated domain-containing proteinO.I.C.G.H.G.
31.399.915.6Ptp.3033.1.A1_s_atDN498061--9e-8At3g47520MDH (MALATE DEHYDROGENASE)O.I.C.G.H.G.
29.699.946.0Ptp.5712.1.S1_atCK113355ammonium transporter-3e-28At1g64780ATAMT1O.I.C.G.H.G.
29.299.90.2PtpAffx.59126.1.S1_s_atCA826047hypothetical protein-2e+0At4g01897unknown proteinO.I.C.G.H.G.
26.299.90.3PtpAffx.212418.1.S1_atpmrna24323hypothetical protein-4e-1At1g69030-O.I.C.G.H.G.
25.499.90.0PtpAffx.93567.1.A1_atBP932636--4e+0At3g56750unknown proteinO.I.C.G.H.G.
24.199.80.8Ptp.2993.1.S1_atCX658401hypothetical protein-7e-12At3g02885GASA5 (GAST1 PROTEIN HOMOLOG 5)O.I.C.G.H.G.
22.199.827.2PtpAffx.891.16.A1_atCV241926tubulin, beta chain /// tubulin, beta chain-3e-53At5g62700TUB3O.I.C.G.H.G.
21.399.84.9Ptp.7632.1.S1_atDN497977ZIP transporter-2e-1At5g59520ZIP2O.I.C.G.H.G.
20.899.80.2Ptp.4115.1.S1_atAJ777870hypothetical protein-1e-1At1g72150PATL1 (PATELLIN 1)O.I.C.G.H.G.
20.499.895.8Ptp.3033.1.A1_atDN498061--9e-8At3g47520MDH (MALATE DEHYDROGENASE)O.I.C.G.H.G.
20.399.80.2PtpAffx.22806.1.S1_atCF236242hypothetical protein-6e-4At1g28400unknown proteinO.I.C.G.H.G.
19.599.70.1Ptp.531.1.A1_atBU895252hypothetical protein-3e-1At1g12080unknown proteinO.I.C.G.H.G.
19.399.70.1PtpAffx.202076.1.S1_atpmrna4141hypothetical protein-2e-1At5g46050PTR3 (PEPTIDE TRANSPORTER 3)O.I.C.G.H.G.
19.199.70.3PtpAffx.16163.1.S1_atDN496579cytochrome P450-4e-7At5g08250cytochrome P450 family proteinO.I.C.G.H.G.
18.899.70.5Ptp.2805.1.S1_atBI126282hypothetical protein-1e+0At5g36240zinc knuckle (CCHC-type) family proteinO.I.C.G.H.G.
18.199.70.1PtpAffx.151413.1.S1_atDN487165--8e-2At4g19985GCN5-related N-acetyltransferase (GNAT) family proteinO.I.C.G.H.G.
18.099.70.8PtpAffx.144679.1.S1_atAI166595hypothetical protein-9e-1At3g17060pectinesterase family proteinO.I.C.G.H.G.
17.699.70.1PtpAffx.213823.1.S1_atpmrna26979hypothetical protein-3e-2At5g64240AtMC3 (metacaspase 3)O.I.C.G.H.G.
17.499.60.5Ptp.1623.2.A1_atCK092273--3e+0At5g63240glycosyl hydrolase family protein 17O.I.C.G.H.G.
16.999.68.6PtpAffx.99659.1.S1_atCV263736hypothetical protein-3e-11At4g20390integral membrane family proteinO.I.C.G.H.G.
16.899.61.3Ptp.2426.1.S1_atCK093375hypothetical protein-5e+0Atmg01330-O.I.C.G.H.G.
16.799.60.0Ptp.510.1.A1_atCK088013--4e-1At1g22910RNA recognition motif (RRM)-containing proteinO.I.C.G.H.G.
16.599.63.0PtpAffx.206781.1.S1_atpmrna13465hypothetical protein-3e-18At4g32400SHS1 (SODIUM HYPERSENSITIVE 1)O.I.C.G.H.G.
16.099.60.1PtpAffx.9190.1.S1_s_atBI125264amino acid transporter /// amino acid transporter-2e+0Atmg00320-O.I.C.G.H.G.
15.799.612.5PtpAffx.206090.1.S1_x_atpmrna12063hypothetical protein-2e-69At3g57150NAP57 (Arabidopsis thaliana homologue of NAP57)O.I.C.G.H.G.
15.799.60.2PtpAffx.137725.1.S1_atCK105612--6e-1At1g67830ATFXG1 (alpha-fucosidase 1)O.I.C.G.H.G.
15.799.60.0PtpAffx.31552.1.A1_a_atCV230942hypothetical protein-1e+0At3g63190RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR)O.I.C.G.H.G.
15.699.53.3PtpAffx.249.479.S1_atBI138103--5e-23At5g27120SAR DNA-binding protein, putativeO.I.C.G.H.G.
15.499.50.9Ptp.478.1.A1_atCK087253hypothetical protein-4e-1At4g25410DNA binding / transcription factorO.I.C.G.H.G.
15.399.50.0PtpAffx.7762.1.A1_atCV252280hypothetical protein-6e-85At1g10840TIF3H1O.I.C.G.H.G.
15.099.50.2PtpAffx.217053.1.S1_atpmrna32177hypothetical protein-3e-105At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)O.I.C.G.H.G.
14.999.50.5Ptp.765.1.A1_atCK088866--3e+0At2g29860kelch repeat-containing F-box family proteinO.I.C.G.H.G.
14.999.50.1PtpAffx.146766.1.A1_atCV262936NAC domain protein, IPR003441-8e-1At1g35260MLP165 (MLP-LIKE PROTEIN 165)O.I.C.G.H.G.
14.899.51.6Ptp.546.1.A1_atCK088525hypothetical protein-2e+1At5g03920unknown proteinO.I.C.G.H.G.
14.799.50.0PtpAffx.27190.1.S1_atCA927752hypothetical protein-1e-53At5g0296040S ribosomal protein S23 (RPS23B)O.I.C.G.H.G.
14.699.52.3Ptp.871.1.S1_atDN483664hypothetical protein-1e-41At5g53560CB5-E (CYTOCHROME B5 ISOFORM E)O.I.C.G.H.G.
14.499.51.4PtpAffx.97141.1.A1_atCK097916multidrug/pheromone exporter, MDR family, ABC transporter family-3e-2At3g28345ABC transporter family proteinO.I.C.G.H.G.
14.299.569.1Ptp.6755.1.S1_atAY378090.1hypothetical protein-6e-1At5g46700TRN2 (TORNADO 2)O.I.C.G.H.G.
14.299.51.3PtpAffx.6940.1.S1_a_atCK107427hypothetical protein-1e+0At4g38410dehydrin, putativeO.I.C.G.H.G.
14.099.40.0PtpAffx.211700.1.S1_s_atpmrna22932hypothetical protein-3e+0At4g30480tetratricopeptide repeat (TPR)-containing proteinO.I.C.G.H.G.
13.999.40.2PtpAffx.35394.1.S1_atDN502842--8e-1At1g6000029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeO.I.C.G.H.G.
13.999.40.1PtpAffx.203780.1.S1_atpmrna7465hypothetical protein-1e-4At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinO.I.C.G.H.G.
13.799.41.9PtpAffx.205796.1.S1_atpmrna11458hypothetical protein-5e-2At1g19715jacalin lectin family proteinO.I.C.G.H.G.
13.599.40.8PtpAffx.97585.1.S1_atCA823453phenylcoumaran benzylic ether reductase 7-1e-14At1g75280isoflavone reductase, putativeO.I.C.G.H.G.
13.599.40.2PtpAffx.9623.1.S1_s_atAY919622.1hypothetical protein-7e-92At1g52150ATHB-15O.I.C.G.H.G.
13.499.41.1Ptp.4774.1.S1_atBU824518--1e-55At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.C.G.H.G.
13.399.417.5PtpAffx.135307.1.S1_s_atAJ768472hypothetical protein-2e-2At2g22520unknown proteinO.I.C.G.H.G.
13.399.40.4Ptp.789.1.S1_atCK089311hypothetical protein-8e-8At2g41820leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
13.399.40.2PtpAffx.212058.1.S1_s_atpmrna23666hypothetical protein-6e+0At5g40710zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
13.399.40.1Ptp.7675.1.S1_atDN488945hypothetical protein-6e-3At3g50740UGT72E1 (UDP-glucosyl transferase 72E1)O.I.C.G.H.G.
13.299.41.5PtpAffx.11483.2.A1_atCK106946hypothetical protein-7e-2At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)O.I.C.G.H.G.
13.299.40.2Ptp.2319.1.S1_atCK088696--6e+0At3g13594unknown proteinO.I.C.G.H.G.
13.299.40.0PtpAffx.131101.1.S1_atCK096858hypothetical protein-5e-1At5g66160JR700O.I.C.G.H.G.
13.299.40.0PtpAffx.204477.1.S1_atpmrna8789hypothetical protein-6e-6At3g19430late embryogenesis abundant protein-related / LEA protein-relatedO.I.C.G.H.G.
13.199.41.1Ptp.5367.1.S1_atCK092227hypothetical protein-3e+0At5g55480SVL1 (SHV3-LIKE 1)O.I.C.G.H.G.
13.199.40.3PtpAffx.39559.1.S1_atCF237196hypothetical protein-3e+0At3g45460zinc ion bindingO.I.C.G.H.G.
13.199.40.2PtpAffx.13609.1.S1_atCX167472hypothetical protein-2e-11At1g30440phototropic-responsive NPH3 family proteinO.I.C.G.H.G.
13.199.40.0PtpAffx.225552.1.S1_s_atpmrna44981hypothetical protein-1e-1At1g18480calcineurin-like phosphoesterase family proteinO.I.C.G.H.G.
13.099.45.6PtpAffx.106134.1.S1_atDN495981--5e-2At2g17240unknown proteinO.I.C.G.H.G.
13.099.40.0PtpAffx.216586.1.S1_atpmrna31463hypothetical protein-5e+0At5g43050unknown proteinO.I.C.G.H.G.
12.799.32.7PtpAffx.224333.1.S1_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)O.I.C.G.H.G.
12.799.31.9Ptp.7477.1.S1_atCV267944hypothetical protein-4e+0At3g04680CLPS3 (CLP-SIMILAR PROTEIN 3)O.I.C.G.H.G.
12.799.30.9PtpAffx.20709.1.S1_atBU884860hypothetical protein-6e+0At5g50110-O.I.C.G.H.G.
12.799.30.8Ptp.96.2.S1_atBU837199hypothetical protein-2e-2At5g63150unknown proteinO.I.C.G.H.G.
12.799.30.3PtpAffx.200498.1.S1_s_atpmrna1013hypothetical protein-9e-6At5g11420-O.I.C.G.H.G.
12.799.30.2PtpAffx.153576.1.A1_atCV251940hypothetical protein-1e+0At1g72210basic helix-loop-helix (bHLH) family protein (bHLH096)O.I.C.G.H.G.
12.699.35.7Ptp.5978.1.S1_atCK112329hypothetical protein-2e-24At2g23930SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)O.I.C.G.H.G.
12.699.31.7Ptp.826.1.S1_atCK089341hypothetical protein-3e-1At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.C.G.H.G.
12.699.30.0Ptp.2099.1.S1_atCF228158hypothetical protein-8e-1At1g35440CYCT1O.I.C.G.H.G.
12.599.33.0PtpAffx.125399.1.S1_atBU834070hypothetical protein-4e+0At4g37530peroxidase, putativeO.I.C.G.H.G.
12.599.32.7PtpAffx.36879.1.A1_s_atCV275101hypothetical protein-2e-1At3g49120PRXCB (PEROXIDASE CB)O.I.C.G.H.G.
12.599.30.2PtpAffx.153625.1.A1_s_atCV249796hypothetical protein-2e+0At2g37030auxin-responsive family proteinO.I.C.G.H.G.
12.499.30.1Ptp.6684.1.S1_atDN484836hypothetical protein-1e+0At5g63700zinc finger (C3HC4 type RING finger) family proteinO.I.C.G.H.G.
12.299.376.5Ptp.6755.1.S1_x_atAY378090.1hypothetical protein-6e-1At5g46700TRN2 (TORNADO 2)O.I.C.G.H.G.
12.299.36.0PtpAffx.47344.1.S1_atCK097216white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family-1e-48At1g31770ABC transporter family proteinO.I.C.G.H.G.
12.299.33.0PtpAffx.224333.1.S1_x_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)O.I.C.G.H.G.
12.299.30.6Ptp.7764.1.S1_atDN489656hypothetical protein-5e+0At5g49170unknown proteinO.I.C.G.H.G.
12.299.30.6PtpAffx.16365.1.A1_atDN487768hypothetical protein-5e-3At1g32910transferase family proteinO.I.C.G.H.G.
12.299.30.5Ptp.781.1.A1_atCK089203--1e+0At3g28620zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
12.199.30.8PtpAffx.122552.6.S1_atCK093378--2e-1At4g19920disease resistance protein (TIR class), putativeO.I.C.G.H.G.
12.199.30.3PtpAffx.7035.1.S1_atCK094601--7e+0At5g01910unknown proteinO.I.C.G.H.G.
12.199.30.2Ptp.6177.1.S1_atDN500837hypothetical protein-9e-1At1g7406060S ribosomal protein L6 (RPL6B)O.I.C.G.H.G.
12.199.30.0Ptp.7184.1.S1_atDN498158hypothetical protein-2e-1At4g32530vacuolar ATP synthase, putative / V-ATPase, putativeO.I.C.G.H.G.
12.199.30.0PtpAffx.162152.1.S1_atCV228968hypothetical protein-3e-4At4g32785-O.I.C.G.H.G.
12.099.20.2PtpAffx.102970.1.A1_atCN549756hypothetical protein-3e-14At4g30520leucine-rich repeat family protein / protein kinase family proteinO.I.C.G.H.G.
12.099.20.2PtpAffx.224552.1.S1_atpmrna43190hypothetical protein-1e-3At1g56720protein kinase family proteinO.I.C.G.H.G.
12.099.20.0PtpAffx.118590.1.S1_atBI124620--4e+0At5g27290unknown proteinO.I.C.G.H.G.
11.999.28.6Ptp.2619.2.S1_atBU897691hypothetical protein-3e-1Atmg00630-O.I.C.G.H.G.
11.999.22.7PtpAffx.2517.1.A1_atCV252978--1e-7At3g18060transducin family protein / WD-40 repeat family proteinO.I.C.G.H.G.
11.999.20.0Ptp.281.1.S1_atAW261126--3e-1At1g04870PRMT10O.I.C.G.H.G.
11.899.213.7PtpAffx.206090.1.S1_atpmrna12063hypothetical protein-2e-69At3g57150NAP57 (Arabidopsis thaliana homologue of NAP57)O.I.C.G.H.G.
11.899.22.9PtpAffx.26773.2.A1_atCF232644hypothetical protein-1e+0At4g12840unknown proteinO.I.C.G.H.G.
11.899.20.5Ptp.2544.1.A1_atCK087698hypothetical protein-1e-12At3g24660TMKL1 (transmembrane kinase-like 1)O.I.C.G.H.G.
11.899.20.2PtpAffx.56138.1.A1_atCV258067hypothetical protein-6e+0At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)O.I.C.G.H.G.
11.899.20.0PtpAffx.138383.1.S1_atBU837837--7e+0At5g42990UBC18 (ubiquitin-conjugating enzyme 18)O.I.C.G.H.G.
11.799.20.4Ptp.3517.1.S1_atBU832259hypothetical protein-4e-1At5g09710magnesium transporter CorA-like family proteinO.I.C.G.H.G.
11.799.20.4PtpAffx.110148.1.A1_atCK089991hypothetical protein-8e-1At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.C.G.H.G.
11.699.21.0PtpAffx.224566.1.S1_atpmrna43217cytochrome P450-5e-2At5g24960CYP71A14O.I.C.G.H.G.
11.699.20.2Ptp.7905.1.S1_atDN501458--3e+0At5g03050unknown proteinO.I.C.G.H.G.



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