Microarray experiments to specifically-expressed genes

GSM ID	GSM328277
Assay name	Populus x canescens root control_rep_01
GSE experiment	GSE13109: Effect of hypoxia on gene expression in Grey poplar

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
73.5	100.0	0.3	PtpAffx.200036.1.S1_at	pmrna64	hypothetical protein	-	6e-7	At3g13610	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
48.8	100.0	5.4	PtpAffx.205281.1.S1_at	pmrna10469	hypothetical protein	-	6e-7	At3g12900	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
38.9	100.0	1.1	PtpAffx.205550.1.S1_s_at	pmrna10977	nramp transporter /// nramp transporter	-	6e-5	At1g15960	NRAMP6	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
27.8	99.9	0.0	PtpAffx.219402.1.S1_x_at	pmrna35322	hypothetical protein	-	3e-1	At2g16676	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
25.6	99.9	0.3	PtpAffx.221147.1.S1_at	pmrna37785	cytochrome P450	-	1e-14	At4g31940	CYP82C4	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
25.5	99.9	0.0	PtpAffx.201822.1.S1_at	pmrna3632	hypothetical protein	-	2e+0	At3g09820	ADK1 (adenosine kinase 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
23.7	99.8	0.1	Ptp.7971.1.S1_at	DN492783	hypothetical protein	-	3e-23	At1g53580	GLY3 (GLYOXALASE II 3)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
22.8	99.8	2.7	PtpAffx.222443.1.S1_at	pmrna39848	hypothetical protein	-	2e+0	At5g20885	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
22.4	99.8	28.2	PtpAffx.212974.1.S1_s_at	pmrna25380	ZIP transporter /// ZIP transporter /// ZIP transporter	-	2e-12	At1g31260	ZIP10 (ZINC TRANSPORTER 10 PRECURSOR)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
20.3	99.8	98.6	PtpAffx.149473.1.S1_at	CA823445	-	-	8e-2	At1g08830	CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
20.1	99.7	7.4	PtpAffx.200963.1.S1_s_at	pmrna1883	hypothetical protein	-	1e-11	At5g14650	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
19.8	99.7	56.4	PtpAffx.212976.1.S1_at	pmrna25382	ZIP transporter	-	2e-12	At1g31260	ZIP10 (ZINC TRANSPORTER 10 PRECURSOR)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
19.0	99.7	1.1	Ptp.7253.1.S1_at	BU896567	-	-	5e+0	At3g48590	NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
18.9	99.7	0.2	PtpAffx.224188.1.S1_at	pmrna42492	ammonium transporter	-	3e-3	At2g38290	ATAMT2 (AMMONIUM TRANSPORTER 2)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
18.0	99.7	0.2	PtpAffx.208982.1.S1_s_at	pmrna17801	hypothetical protein	-	1e-1	At2g34330	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
17.7	99.7	0.0	PtpAffx.2408.1.S1_at	DN493252	hypothetical protein	-	2e-1	At2g26590	adhesion regulating molecule family	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
17.7	99.7	0.0	PtpAffx.4884.2.S1_at	CV260797	hypothetical protein	-	7e+0	At5g45830	DOG1 (DELAY OF GERMINATION 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
17.6	99.7	0.2	PtpAffx.119811.1.S1_s_at	CF936569	NAC domain protein, IPR003441	-	5e-19	At2g43000	anac042 (Arabidopsis NAC domain containing protein 42)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
17.6	99.7	0.1	PtpAffx.32356.1.S1_at	AF230109.1	hypothetical protein	-	3e+0	At3g57260	BGL2 (BETA-1,3-GLUCANASE 2)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
16.8	99.6	1.3	PtpAffx.200963.1.S1_at	pmrna1883	hypothetical protein	-	1e-11	At5g14650	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
16.3	99.6	0.2	PtpAffx.103892.1.S1_a_at	CB239724	hypothetical protein	-	4e+0	At4g21310	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
16.3	99.6	0.0	PtpAffx.222558.1.S1_at	pmrna40073	hypothetical protein	-	5e+0	At5g39140	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
15.6	99.5	0.2	PtpAffx.208981.1.S1_s_at	pmrna17800	hypothetical protein	-	7e-1	At5g43830	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
15.1	99.5	0.0	PtpAffx.216512.1.S1_at	pmrna31336	hypothetical protein	-	2e-7	At1g06840	leucine-rich repeat transmembrane protein kinase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
14.8	99.5	0.0	PtpAffx.224647.1.S1_at	pmrna43392	hypothetical protein	-	5e-1	At3g11480	BSMT1	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
14.7	99.5	0.0	PtpAffx.209328.1.S1_at	pmrna18443	-	-	5e-1	At2g44800	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
14.6	99.5	4.7	PtpAffx.57620.1.S1_at	AJ777506	-	-	3e+0	At5g38370	zinc ion binding	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
14.6	99.5	0.6	PtpAffx.211561.1.S1_at	pmrna22656	hypothetical protein	-	3e-1	At1g01590	FRO1 (FERRIC REDUCTION OXIDASE 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
14.3	99.5	13.4	PtpAffx.224633.1.S1_s_at	pmrna43360	hypothetical protein	-	2e+0	At3g26040	transferase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.9	99.4	0.1	PtpAffx.212117.1.S1_s_at	pmrna23764	tir-nbs-lrr resistance protein /// hypothetical protein /// tir-nbs-lrr resistance protein	-	2e+0	At5g07910	leucine-rich repeat family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.7	99.4	1.4	Ptp.3870.1.S1_s_at	BU884174	hypothetical protein	-	5e-14	At4g15236	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.7	99.4	0.0	PtpAffx.208418.1.S1_s_at	pmrna16729	hypothetical protein	-	2e-1	At3g22800	leucine-rich repeat family protein / extensin family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.4	99.4	0.1	PtpAffx.32356.1.S1_x_at	AF230109.1	hypothetical protein	-	3e+0	At3g57260	BGL2 (BETA-1,3-GLUCANASE 2)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.3	99.4	1.2	PtpAffx.206631.1.S1_at	pmrna13163	hypothetical protein	-	3e-24	At2g26290	ARSK1 (root-specific kinase 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.3	99.4	0.1	PtpAffx.225739.1.S1_at	pmrna45309	hypothetical protein	-	1e-1	At2g29000	leucine-rich repeat family protein / protein kinase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.3	99.4	0.0	Ptp.2499.1.S1_at	CK093601	hypothetical protein	-	2e-6	At1g61667	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.3	99.4	0.0	PtpAffx.50247.1.A1_at	CV253145	hypothetical protein	-	2e-2	At1g17180	ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.2	99.4	0.4	PtpAffx.209182.1.S1_at	pmrna18171	hypothetical protein	-	1e-11	At3g19850	phototropic-responsive NPH3 family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.1	99.4	14.7	Ptp.6001.1.S1_at	BU812899	-	-	3e-1	At1g07610	MT1C	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.1	99.4	0.0	PtpAffx.205806.1.S1_x_at	pmrna11477	hypothetical protein	-	4e-27	At1g75520	SRS5 (SHI-RELATED SEQUENCE 5)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
13.0	99.4	0.2	PtpAffx.205078.1.S1_at	pmrna10063	hypothetical protein	-	5e-10	At2g28160	FRU (FER-LIKE REGULATOR OF IRON UPTAKE)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.7	99.3	1.7	PtpAffx.7896.2.S1_at	CV244334	-	-	6e-14	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.7	99.3	0.0	PtpAffx.218567.1.S1_at	pmrna34229	hypothetical protein	-	2e-1	At1g26300	BSD domain-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.6	99.3	1.1	PtpAffx.224283.1.S1_s_at	pmrna42689	hypothetical protein	-	5e-4	At3g44870	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.2	99.3	1.3	Ptp.4426.1.S1_at	DN489141	-	-	1e+0	At3g05890	RCI2B (RARE-COLD-INDUCIBLE 2B)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.2	99.3	0.7	PtpAffx.908.1.S1_at	CV263697	hypothetical protein	-	5e+0	At4g33720	pathogenesis-related protein, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.2	99.3	0.2	PtpAffx.203864.1.S1_at	pmrna7631	flavonoid o-methyltransferase related	-	2e+0	At1g31720	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.1	99.3	22.3	PtpAffx.204364.1.S1_at	pmrna8576	hypothetical protein	-	4e-40	At1g76490	HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.0	99.2	0.1	PtpAffx.225056.1.S1_at	pmrna44137	hypothetical protein	-	2e-4	At1g52190	proton-dependent oligopeptide transport (POT) family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.0	99.2	0.0	PtpAffx.209496.1.S1_at	pmrna18822	aminophospholipid ATPase	-	2e-49	At5g04930	ALA1 (aminophospholipid ATPase1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
12.0	99.2	0.0	PtpAffx.36847.1.A1_at	CV276303	-	-	3e+0	At1g02065	SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.9	99.2	11.0	PtpAffx.210120.1.S1_at	pmrna19939	hypothetical protein	-	2e+0	At2g46735	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.7	99.2	3.1	PtpAffx.10742.1.S1_at	BP935108	hypothetical protein	-	2e+0	At5g63460	SAP domain-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.6	99.2	0.2	PtpAffx.201007.1.S1_at	pmrna1977	hypothetical protein	-	1e-19	At5g14340	AtMYB40 (myb domain protein 40)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.4	99.2	14.9	PtpAffx.23558.1.S1_at	CV283599	hypothetical protein	-	7e-1	At1g71740	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.3	99.2	8.2	Ptp.5714.1.S1_at	AJ646891.1	hypothetical protein /// high affinity nitrate transporter /// hypothetical protein	-	2e-8	At1g12940	ATNRT2.5 (nitrate transporter2.5)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.3	99.2	0.0	PtpAffx.220491.1.S1_at	pmrna36884	hypothetical protein	-	4e-1	At3g25170	RALFL26 (ralf-like 26)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.2	99.1	0.0	PtpAffx.47213.1.S1_at	DN494345	hypothetical protein	-	3e-1	At2g18070	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.1	99.1	0.2	PtpAffx.203992.1.S1_at	pmrna7879	hypothetical protein	-	7e-4	At3g55710	UDP-glucoronosyl/UDP-glucosyl transferase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
11.0	99.1	0.2	Ptp.3849.1.S1_at	CA930094	hypothetical protein	-	4e-21	At5g08020	RPA70B (RPA70-KDA SUBUNIT B)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.9	99.1	0.2	PtpAffx.200207.1.S1_at	pmrna393	hypothetical protein	-	2e-28	At3g24240	leucine-rich repeat transmembrane protein kinase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.9	99.1	0.1	PtpAffx.35493.1.S1_at	DN488263	-	-	5e-7	At3g14362	RTFL10 (ROTUNDIFOLIA LIKE 10)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.9	99.1	0.0	Ptp.1569.1.S1_at	CK110263	-	-	2e-2	At2g40510	40S ribosomal protein S26 (RPS26A)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.8	99.1	1.4	PtpAffx.40216.2.S1_at	DN493282	hypothetical protein	-	6e+0	At1g03730	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.8	99.1	0.1	PtpAffx.212514.1.S1_s_at	pmrna24509	hypothetical protein	-	2e-4	At1g06330	copper-binding family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.8	99.1	0.0	PtpAffx.221051.1.S1_at	pmrna37609	hypothetical protein	-	2e+0	At1g31460	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.7	99.1	0.4	PtpAffx.200862.1.S1_at	pmrna1682	hypothetical protein	-	8e-4	At1g51340	MATE efflux family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.7	99.1	0.3	PtpAffx.218194.1.S1_s_at	pmrna33742	cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein	-	4e+0	At5g39580	peroxidase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.7	99.1	0.2	PtpAffx.207140.1.S1_s_at	pmrna14166	cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450	-	5e-2	At3g52320	F-box family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.7	99.1	0.1	PtpAffx.200243.1.S1_s_at	pmrna471	glutaredoxin /// glutaredoxin	-	2e+0	At4g33040	glutaredoxin family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.7	99.1	0.0	PtpAffx.217901.1.S1_x_at	pmrna33351	hypothetical protein	-	4e-4	At2g29470	ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
10.6	99.0	0.1	PtpAffx.203863.1.S1_at	pmrna7630	flavonoid o-methyltransferase related	-	6e-4	At4g35160	O-methyltransferase family 2 protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)

Back to the CoP portal site

Back to the KAGIANA project homepage