Microarray experiments to specifically-expressed genes

GSM ID GSM320473
Assay name protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3
GSE experiment GSE12770: Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
85.8100.00.0Zm.9817.1.A1_atBM339996--1e+0At1g0110060S acidic ribosomal protein P1 (RPP1A)O.I.C.G.H.G.
80.4100.00.0ZmAffx.643.1.S1_atAI715071--1e+1At5g5985040S ribosomal protein S15A (RPS15aF)O.I.C.G.H.G.
68.7100.00.0ZmAffx.406.1.A1_atAI670258--4e-1At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.C.G.H.G.
67.4100.00.0RPTR-Zm-M10961-3_s_atRPTR-Zm-M10961-3--0O.I.C.G.H.G.
53.1100.00.0ZmAffx.229.1.A1_atAI670241--5e-2At3g58190LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)O.I.C.G.H.G.
52.6100.00.0ZmAffx.611.1.S1_atAI715039--1e+1At5g13340unknown proteinO.I.C.G.H.G.
50.7100.00.0RPTR-Zm-AF292559-2_s_atRPTR-Zm-AF292559-2--0O.I.C.G.H.G.
48.2100.00.0ZmAffx.590.1.A1_atAI715018--1e+1At5g06043unknown proteinO.I.C.G.H.G.
47.6100.00.0ZmAffx.635.1.S1_atAI715063--1e+1At2g25570bindingO.I.C.G.H.G.
46.3100.00.0ZmAffx.250.1.S1_atAI670264--3e+0At4g34730ribosome-binding factor A family proteinO.I.C.G.H.G.
45.6100.00.0ZmAffx.649.1.S1_atAI715077--3e+0At4g22000unknown proteinO.I.C.G.H.G.
45.1100.011.5Zm.473.1.S1_a_atU66608.1cyclin type B-like-2e-1At4g35620CYCB2O.I.C.G.H.G.
45.1100.00.0Zm.11876.1.A1_atBM381446--5e+0At1g03700-O.I.C.G.H.G.
44.8100.00.0ZmAffx.396.1.S1_atAI676824--6e-1At1g70410carbonic anhydrase, putative / carbonate dehydratase, putativeO.I.C.G.H.G.
39.999.90.0ZmAffx.406.2.A1_x_atAI670440--2e-1At1g74650MYB31 (MYB DOMAIN PROTEIN 31)O.I.C.G.H.G.
39.299.90.0ZmAffx.618.1.A1_atAI715046--1e+1At5g46940invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
38.199.90.0ZmAffx.313.1.A1_atAI670495--3e+0At3g49520F-box family proteinO.I.C.G.H.G.
37.499.92.7ZmAffx.893.1.S1_atAI770864--8e-1At1g19850MP (MONOPTEROS)O.I.C.G.H.G.
36.699.90.0Zm.15789.2.A1_atCF632627--3e+0At3g02885GASA5 (GAST1 PROTEIN HOMOLOG 5)O.I.C.G.H.G.
36.199.90.0ZmAffx.405.1.S1_atAI676828--3e+0At5g38700unknown proteinO.I.C.G.H.G.
35.799.90.0ZmAffx.423.1.S1_atAI676855--1e+1At5g10110unknown proteinO.I.C.G.H.G.
35.699.90.0ZmAffx.356.1.S1_atAI670543--3e-3At5g09750HEC3 (HECATE 3)O.I.C.G.H.G.
35.499.90.0ZmAffx.312.1.S1_atAI670494--3e+0At3g17580unknown proteinO.I.C.G.H.G.
34.099.90.0ZmAffx.625.1.S1_atAI715053--1e+1At5g13340unknown proteinO.I.C.G.H.G.
32.299.82.0Zm.2833.1.S1_s_atAW076206protein ABIL1-2e-1At3g53670unknown proteinO.I.C.G.H.G.
31.899.80.0ZmAffx.640.1.A1_atAI715068--1e+1At5g13340unknown proteinO.I.C.G.H.G.
31.799.80.0ZmAffx.603.1.A1_atAI715031--1e+1At5g05430-O.I.C.G.H.G.
31.599.80.0ZmAffx.358.1.A1_atAI670545--3e+0At3g49940LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38)O.I.C.G.H.G.
31.199.84.2Zm.10720.3.S1_atAI711831--3e+0At3g13430zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
30.899.80.0RPTR-Zm-X03453-1_atRPTR-Zm-X03453-1--0O.I.C.G.H.G.
30.799.80.0ZmAffx.326.1.A1_atAI670508--8e-1At2g26860F-box family proteinO.I.C.G.H.G.
30.699.80.0Zm.13390.1.A1_atAF457982.1--4e+0At3g01328-O.I.C.G.H.G.
30.599.80.0ZmAffx.293.1.S1_atAI670426--8e-1At1g15150MATE efflux family proteinO.I.C.G.H.G.
30.399.80.0ZmAffx.591.1.S1_atAI715019--1e+1At5g10620-O.I.C.G.H.G.
30.299.817.3Zm.16449.1.A1_atAY112082.1--1e+0At3g29034unknown proteinO.I.C.G.H.G.
30.299.88.1Zm.18147.1.S1_atCN845526hypothetical protein LOC100275370-5e+0At3g17950unknown proteinO.I.C.G.H.G.
30.099.83.8Zm.6063.2.S1_atAI668193Vacuolar proton pump homolog1-2e-10At1g15690AVP1O.I.C.G.H.G.
29.699.80.5Zm.5792.2.A1_atAY106767.1--1e+0At4g39990RABA4B (RAB GTPASE HOMOLOG A4B)O.I.C.G.H.G.
29.399.80.0ZmAffx.221.1.S1_atAI670229--8e-1At5g64670ribosomal protein L15 family proteinO.I.C.G.H.G.
29.399.80.0ZmAffx.653.1.S1_atAI715081--1e+1At2g33480ANAC041 (Arabidopsis NAC domain containing protein 41)O.I.C.G.H.G.
29.099.816.5Zm.2806.1.A1_atAW067337--6e-1At2g41660MIZ1 (mizu-kussei 1)O.I.C.G.H.G.
28.999.73.7Zm.19151.1.S1_atCO522803hypothetical protein LOC100217264-2e-1At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.C.G.H.G.
28.999.70.0Zm.11240.1.A1_atBM340894--1e+0At3g5954060S ribosomal protein L38 (RPL38B)O.I.C.G.H.G.
28.999.70.0ZmAffx.1138.1.S1_atAW331524--2e-3At3g22968CPuORF59 (Conserved peptide upstream open reading frame 59)O.I.C.G.H.G.
28.799.70.0ZmAffx.358.1.S1_atAI670545--3e+0At3g49940LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38)O.I.C.G.H.G.
28.699.7471.3ZmAffx.1501.1.S1_at40794996-118--8e-1At5g12300C2 domain-containing proteinO.I.C.G.H.G.
28.699.70.0ZmAffx.661.1.A1_atAI715041--1e+1At4g16540heat shock protein-relatedO.I.C.G.H.G.
28.599.71.7Zm.2895.10.S1_a_atAI667767--7e-30At4g1432060S ribosomal protein L36a/L44 (RPL36aB)O.I.C.G.H.G.
28.399.70.0ZmAffx.419.1.S1_atAI676851--8e-1At1g71000heat shock protein bindingO.I.C.G.H.G.
28.299.70.0ZmAffx.274.1.A1_atAI670402--8e-1At1g51230-O.I.C.G.H.G.
28.099.71378.5ZmAffx.755.1.A1_s_atAI745946--1e-27Atcg00800-O.I.C.G.H.G.
27.899.71087.6ZmAffx.1280.1.S1_s_at11990232-68--7e-132Atcg01280-O.I.C.G.H.G.
27.899.70.1ZmAffx.280.1.A1_atAI670408--3e+1Atcg00070-O.I.C.G.H.G.
27.799.7522.8Zm.16901.1.A1_atBM349872--5e+0At5g42700transcriptional factor B3 family proteinO.I.C.G.H.G.
27.499.70.0ZmAffx.888.1.A1_atAI770836--9e-3At5g66350SHI (SHORT INTERNODES)O.I.C.G.H.G.
27.399.70.0RPTR-Zm-AF323980-1_atRPTR-Zm-AF323980-1--0O.I.C.G.H.G.
27.199.70.0Zm.9784.1.A1_atBM351072--1e+0At5g50840-O.I.C.G.H.G.
27.199.70.0ZmAffx.243.1.S1_atAI670255--2e-1At1g66940protein kinase-relatedO.I.C.G.H.G.
26.899.787.1Zm.701.1.A1_a_atCA40393426S proteasome non-ATPase regulatory subunit 3 /// 26S proteasome non-ATPase regulatory subunit 3-2e-8At1g7599026S proteasome regulatory subunit S3, putative (RPN3)O.I.C.G.H.G.
26.799.711.4AFFX-Zm-r2-Ec-bioB-M_atAFFX-Zm-r2-Ec-bioB-M--0O.I.C.G.H.G.
26.599.710.3Zm.16449.1.S1_atAY112082.1--1e+0At3g29034unknown proteinO.I.C.G.H.G.
26.599.70.0ZmAffx.646.1.S1_atAI715074--3e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)O.I.C.G.H.G.
26.499.70.0RPTR-Zm-M62653-1_atRPTR-Zm-M62653-1--0O.I.C.G.H.G.
26.499.70.0ZmAffx.638.1.A1_atAI715066--8e-1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.C.G.H.G.
26.299.7311.7ZmAffx.1360.1.S1_at40794996-48--1e+0At5g44650unknown proteinO.I.C.G.H.G.
26.199.60.0Zm.10346.3.A1_atCD447208--2e+0At4g23271unknown proteinO.I.C.G.H.G.
26.199.60.0Zm.16462.1.A1_atAY347711.1Xaa-His dipeptidase; X-His dipeptidase; beta-alanyl-histidine dipeptidase-7e+0At5g57685AtGDU3 (Arabidopsis thaliana GLUTAMINE DUMPER 3)O.I.C.G.H.G.
26.099.613.6Zm.1190.1.A1_atBQ486825hypothetical protein LOC100277942-6e+0At5g52605-O.I.C.G.H.G.
25.799.60.0Zm.16462.1.S1_atAY347711.1Xaa-His dipeptidase; X-His dipeptidase; beta-alanyl-histidine dipeptidase-7e+0At5g57685AtGDU3 (Arabidopsis thaliana GLUTAMINE DUMPER 3)O.I.C.G.H.G.
25.699.60.0ZmAffx.225.1.A1_atAI670237--1e+1At5g09470mitochondrial substrate carrier family proteinO.I.C.G.H.G.
25.599.60.0ZmAffx.390.1.S1_atAI676818--3e+0At2g03955-O.I.C.G.H.G.
25.499.664.2AFFX-Zm-r2-Ec-bioC-5_atAFFX-Zm-r2-Ec-bioC-5--0O.I.C.G.H.G.
25.199.6391.0AFFX-Zm-r2-Ec-bioD-5_atAFFX-Zm-r2-Ec-bioD-5--0O.I.C.G.H.G.
25.199.6247.6ZmAffx.909.1.A1_atAI770947--3e+0At2g37060NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8)O.I.C.G.H.G.
24.999.60.0ZmAffx.297.1.A1_atAI670430--3e+0At1g38950unknown proteinO.I.C.G.H.G.
24.599.60.0ZmAffx.294.1.A1_atAI670427--3e+0At3g4459060S acidic ribosomal protein P2 (RPP2D)O.I.C.G.H.G.
24.499.60.0ZmAffx.591.1.A1_atAI715019--1e+1At5g10620-O.I.C.G.H.G.
24.399.60.0ZmAffx.314.1.S1_atAI670496--3e+0At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)O.I.C.G.H.G.
24.299.63.9Zm.4226.1.A1_atAW054152--9e-9At5g51070ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)O.I.C.G.H.G.
24.199.60.0ZmAffx.421.1.S1_atAI676853--3e+0At3g28950avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedO.I.C.G.H.G.
24.099.5357.9Zm.9946.1.A1_atBM348302--1e+1At4g03827unknown proteinO.I.C.G.H.G.
24.099.50.0ZmAffx.406.12.S1_atAI670232--1e+1At5g53030unknown proteinO.I.C.G.H.G.
23.899.50.0Zm.3892.3.A1_atAF136829.1elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.C.G.H.G.
23.599.50.0ZmAffx.234.1.A1_atAI670246--1e+1At4g02770PSAD-1 (photosystem I subunit D-1)O.I.C.G.H.G.
23.499.50.0ZmAffx.406.5.S1_atAI670502--2e-1At2g41760unknown proteinO.I.C.G.H.G.
23.299.5354.1ZmAffx.801.1.S1_atAI770364--3e+0At2g02990RNS1 (RIBONUCLEASE 1)O.I.C.G.H.G.
23.199.511.0AFFX-Zm-r2-Ec-bioB-3_atAFFX-Zm-r2-Ec-bioB-3--0O.I.C.G.H.G.
23.099.50.0ZmAffx.611.1.A1_atAI715039--1e+1At5g13340unknown proteinO.I.C.G.H.G.
22.999.50.2ZmAffx.127.1.S1_atAI665981--8e-1At1g16430surfeit locus protein 5 family protein / SURF5 family proteinO.I.C.G.H.G.
22.999.50.0ZmAffx.426.1.S1_atAI676860--5e-2At5g43210endo/excinuclease amino terminal domain-containing proteinO.I.C.G.H.G.
22.899.5114.7Zm.17270.5.A1_atAI664860--3e-1At4g00940Dof-type zinc finger domain-containing proteinO.I.C.G.H.G.
22.899.50.0ZmAffx.644.1.S1_atAI715072--1e+1At5g10695unknown proteinO.I.C.G.H.G.
22.799.55.5Zm.5010.1.A1_atAI600391hypothetical protein LOC100193747-2e-1At1g48920ATNUC-L1O.I.C.G.H.G.
22.399.50.0ZmAffx.220.1.A1_atAI670228--3e+0At4g14890ferredoxin family proteinO.I.C.G.H.G.
22.299.4104.7Zm.17270.5.A1_x_atAI664860--3e-1At4g00940Dof-type zinc finger domain-containing proteinO.I.C.G.H.G.
22.299.40.0ZmAffx.271.1.S1_atAI670399--1e+1At5g09430hydrolaseO.I.C.G.H.G.
22.199.43.5AFFX-Zm-r2-Ec-bioB-5_atAFFX-Zm-r2-Ec-bioB-5--0O.I.C.G.H.G.
22.099.40.0ZmAffx.392.1.S1_atAI676820--1e+1At2g31035-O.I.C.G.H.G.
21.999.40.0ZmAffx.281.1.S1_atAI670409--3e+0At5g46795MSP2 (microspore-specific promoter 2)O.I.C.G.H.G.
21.799.448.8AFFX-Zm-r2-Ec-bioC-3_atAFFX-Zm-r2-Ec-bioC-3--0O.I.C.G.H.G.



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