Microarray experiments to specifically-expressed genes

GSM ID	GSM320456
Assay name	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1
GSE experiment	GSE12770: Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
97.1	100.0	1.3	Zm.9681.1.A1_at	BM339116	-	-	5e+0	At4g29735	unknown protein	O.I.	C.G.	H.G.	Please select
46.1	100.0	1.3	Zm.1676.1.S1_x_at	BF729580	-	-	9e+0	At5g24314	PTAC7	O.I.	C.G.	H.G.	Please select
45.0	100.0	13.8	Zm.2961.3.S1_at	AW119963	-	-	2e+0	At5g25570	unknown protein	O.I.	C.G.	H.G.	Please select
40.5	99.9	0.0	Zm.9287.1.A1_at	BM347841	-	-	2e+1	At5g17470	calmodulin-related protein, putative	O.I.	C.G.	H.G.	Please select
37.6	99.9	1.7	Zm.5741.2.A1_at	BM074874	Hypothetical protein LOC100191775	-	4e+0	At5g46940	invertase/pectin methylesterase inhibitor family protein	O.I.	C.G.	H.G.	Please select
37.1	99.9	5.0	Zm.16118.1.S1_at	CK786924	-	-	2e+0	At5g45740	unknown protein	O.I.	C.G.	H.G.	Please select
36.3	99.9	2.8	Zm.10051.1.A1_at	BM378991	-	-	3e+0	At1g36622	unknown protein	O.I.	C.G.	H.G.	Please select
36.3	99.9	0.0	Zm.12784.1.A1_x_at	CA398745	-	-	2e+0	At2g27470	NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)	O.I.	C.G.	H.G.	Please select
35.9	99.9	7.0	ZmAffx.34.1.S1_at	AI657433	-	-	2e+0	At4g24470	TIFY1	O.I.	C.G.	H.G.	Please select
35.5	99.9	2.4	Zm.3949.1.S1_at	AW000243	-	-	3e+0	At1g09960	SUT4 (SUCROSE TRANSPORTER 4)	O.I.	C.G.	H.G.	Please select
34.6	99.9	0.2	ZmAffx.482.1.A1_at	AI691285	-	-	3e+0	At5g57510	unknown protein	O.I.	C.G.	H.G.	Please select
34.1	99.9	78.2	ZmAffx.1276.1.S1_s_at	11990232-64	-	-	6e-122	Atcg01310	-	O.I.	C.G.	H.G.	Please select
32.8	99.8	1.9	Zm.17356.1.A1_at	CF634567	Hypothetical protein LOC100193821	-	1e-1	At5g19480	unknown protein	O.I.	C.G.	H.G.	Please select
32.2	99.8	62.3	ZmAffx.1500.1.S1_at	40794996-117	-	-	6e-78	Atcg01310	-	O.I.	C.G.	H.G.	Please select
32.2	99.8	0.2	Zm.9535.1.A1_at	BM075999	-	-	5e+0	At5g56470	FAD-dependent oxidoreductase family protein	O.I.	C.G.	H.G.	Please select
32.1	99.8	0.2	ZmAffx.771.1.A1_at	AI746147	-	-	8e-1	At1g67920	unknown protein	O.I.	C.G.	H.G.	Please select
31.9	99.8	0.0	Zm.8561.1.A1_at	BM336075	-	-	1e-3	At1g02070	unknown protein	O.I.	C.G.	H.G.	Please select
31.1	99.8	11.1	Zm.3851.4.A1_at	CD441077	-	-	1e+0	At5g12470	unknown protein	O.I.	C.G.	H.G.	Please select
30.6	99.8	36.1	ZmAffx.1437.1.S1_at	11990232-3	-	-	2e-53	Atcg00050	-	O.I.	C.G.	H.G.	Please select
30.4	99.8	38.9	ZmAffx.1471.1.S1_at	11990232-38	-	-	9e-89	Atcg00580	-	O.I.	C.G.	H.G.	Please select
30.1	99.8	83.0	Zm.17028.1.S1_at	CF972440	-	-	3e-1	At1g70540	EDA24 (embryo sac development arrest 24)	O.I.	C.G.	H.G.	Please select
30.1	99.8	0.8	Zm.17946.2.A1_at	BM073228	-	-	1e+1	At4g20990	ACA4 (ALPHA CARBONIC ANHYDRASE 4)	O.I.	C.G.	H.G.	Please select
30.0	99.8	21.9	Zm.12069.5.S1_a_at	AI740028	-	-	3e+0	At5g43755	-	O.I.	C.G.	H.G.	Please select
29.8	99.8	12.2	ZmAffx.912.1.S1_at	AI770956	-	-	5e-2	At4g01580	transcriptional factor B3 family protein	O.I.	C.G.	H.G.	Please select
29.6	99.8	30.4	ZmAffx.1362.1.S1_at	11990232-90	-	-	1e-156	Atcg01100	-	O.I.	C.G.	H.G.	Please select
29.5	99.8	3.6	Zm.14803.1.A1_at	BM337022	-	-	1e+0	At4g27790	calcium-binding EF hand family protein	O.I.	C.G.	H.G.	Please select
29.4	99.8	55.3	ZmAffx.982.3.S1_at	AI668278	-	-	3e+0	At5g25570	unknown protein	O.I.	C.G.	H.G.	Please select
29.2	99.8	0.0	Zm.3033.1.S1_at	BU097751	-	-	7e+0	At2g34470	UREG (UREASE ACCESSORY PROTEIN G)	O.I.	C.G.	H.G.	Please select
29.1	99.8	80.5	ZmAffx.1305.1.S1_s_at	11990232-73	-	-	0	Atcg01250	-	O.I.	C.G.	H.G.	Please select
28.7	99.7	42.6	ZmAffx.1339.1.S1_at	11990232-87	-	-	1e-41	Atcg01070	-	O.I.	C.G.	H.G.	Please select
28.7	99.7	20.4	ZmAffx.755.1.S1_at	AI745946	-	-	1e-27	Atcg00800	-	O.I.	C.G.	H.G.	Please select
28.2	99.7	3.7	Zm.9387.1.A1_x_at	BM268482	Hypothetical protein LOC100193233	-	4e+0	At4g09440	unknown protein	O.I.	C.G.	H.G.	Please select
28.2	99.7	0.5	Zm.9837.1.A1_at	BM341641	-	-	9e-1	At1g71740	unknown protein	O.I.	C.G.	H.G.	Please select
28.0	99.7	60.2	Zm.16726.1.A1_at	CF649971	-	-	2e+0	At1g79970	-	O.I.	C.G.	H.G.	Please select
27.7	99.7	1.3	Zm.12381.1.S1_x_at	BQ578121	-	-	1e+0	At2g07363	unknown protein	O.I.	C.G.	H.G.	Please select
27.6	99.7	117.0	ZmAffx.1370.1.S1_at	11990232-98	-	-	5e+0	At5g42955	unknown protein	O.I.	C.G.	H.G.	Please select
27.5	99.7	24.2	Zm.6896.1.A1_at	AI065526	-	-	4e+0	At3g04890	unknown protein	O.I.	C.G.	H.G.	Please select
27.2	99.7	13.5	Zm.16524.8.S1_at	AI665572	-	-	3e-3	At1g02405	proline-rich family protein	O.I.	C.G.	H.G.	Please select
26.9	99.7	83.2	Zm.6009.1.A1_s_at	BM348378	hypothetical protein LOC100274708	-	2e+0	At1g74730	unknown protein	O.I.	C.G.	H.G.	Please select
26.8	99.7	54.3	ZmAffx.1156.1.A1_at	AW433382	-	-	1e-131	Atcg00340	-	O.I.	C.G.	H.G.	Please select
26.8	99.7	31.7	Zm.5514.1.A1_at	AI622393	hypothetical protein LOC100194003	-	2e+0	Atcg00440	-	O.I.	C.G.	H.G.	Please select
26.8	99.7	0.0	Zm.3795.1.A1_at	BM335144	-	-	8e+0	At3g27328	unknown protein	O.I.	C.G.	H.G.	Please select
26.7	99.7	67.7	ZmAffx.989.1.A1_at	AI834717	-	-	3e+0	At4g35783	RTFL6 (ROTUNDIFOLIA LIKE 6)	O.I.	C.G.	H.G.	Please select
26.7	99.7	8.2	ZmAffx.462.1.S1_at	AI677305	-	-	3e+0	At4g22870	leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putative	O.I.	C.G.	H.G.	Please select
26.6	99.7	0.2	Zm.16958.3.S1_a_at	CO528527	-	-	4e+0	At2g29263	unknown protein	O.I.	C.G.	H.G.	Please select
26.4	99.7	105.0	Zm.4312.3.S1_at	CF075294	-	-	5e+0	At5g39190	GER2 (GERMIN-LIKE PROTEIN 2)	O.I.	C.G.	H.G.	Please select
26.1	99.6	99.9	ZmAffx.482.1.S1_at	AI691285	-	-	3e+0	At5g57510	unknown protein	O.I.	C.G.	H.G.	Please select
25.8	99.6	131.2	ZmAffx.1215.1.S1_s_at	6273844	-	-	9e-1	At5g64850	unknown protein	O.I.	C.G.	H.G.	Please select
25.7	99.6	88.5	ZmAffx.1428.1.S1_at	11990232-13	-	-	4e-108	Atcg00180	-	O.I.	C.G.	H.G.	Please select
25.7	99.6	0.0	Zm.9612.1.A1_at	BM333770	-	-	1e+0	At4g14226	unknown protein	O.I.	C.G.	H.G.	Please select
25.6	99.6	136.3	Zm.13926.1.A1_at	U41080.1	-	-	7e-1	At3g24506	unknown protein	O.I.	C.G.	H.G.	Please select
25.6	99.6	82.0	ZmAffx.1281.1.S1_s_at	11990232-69	-	-	1e-55	Atcg01280	-	O.I.	C.G.	H.G.	Please select
25.6	99.6	51.0	ZmAffx.1436.1.S1_at	11990232-2	-	-	2e-29	Atcg00040	-	O.I.	C.G.	H.G.	Please select
25.6	99.6	43.2	ZmAffx.494.1.S1_at	AI770346	-	-	5e+0	At1g16960	unknown protein	O.I.	C.G.	H.G.	Please select
25.6	99.6	41.2	ZmAffx.79.1.S1_at	AI665266	-	-	4e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	O.I.	C.G.	H.G.	Please select
25.5	99.6	123.8	ZmAffx.1150.1.S1_at	AW424582	-	-	6e+0	At1g07130	STN1	O.I.	C.G.	H.G.	Please select
25.4	99.6	103.4	ZmAffx.1308.1.S1_s_at	11990232-76	-	-	2e+0	At5g13780	GCN5-related N-acetyltransferase, putative	O.I.	C.G.	H.G.	Please select
25.4	99.6	48.6	ZmAffx.779.1.S1_at	AI746265	-	-	5e-33	Atcg00780	-	O.I.	C.G.	H.G.	Please select
25.4	99.6	41.1	ZmAffx.199.1.A1_at	AI668491	-	-	7e-1	At1g14687	AtHB32 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 32)	O.I.	C.G.	H.G.	Please select
25.3	99.6	128.1	ZmAffx.1302.1.S1_at	11990232-70	-	-	3e+0	At3g44350	anac061 (Arabidopsis NAC domain containing protein 61)	O.I.	C.G.	H.G.	Please select
25.3	99.6	49.1	Zm.15107.1.A1_at	CF273266	-	-	6e+0	At5g36980	-	O.I.	C.G.	H.G.	Please select
25.2	99.6	45.3	ZmAffx.1340.1.S1_at	11990232-88	-	-	7e-45	Atcg01080	-	O.I.	C.G.	H.G.	Please select
25.2	99.6	23.0	Zm.5576.1.A1_at	AI622800	hypothetical protein LOC100279702	-	2e-1	At3g30200	-	O.I.	C.G.	H.G.	Please select
25.0	99.6	119.3	ZmAffx.1278.1.S1_s_at	11990232-66	-	-	1e+0	At3g22880	DMC1 (DISRUPTION OF MEIOTIC CONTROL 1)	O.I.	C.G.	H.G.	Please select
24.9	99.6	9.5	Zm.12069.2.S1_a_at	AY112265.1	-	-	3e+0	At4g32530	vacuolar ATP synthase, putative / V-ATPase, putative	O.I.	C.G.	H.G.	Please select
24.7	99.6	88.8	ZmAffx.518.1.S1_at	AI711603	-	-	3e-111	Atcg00430	-	O.I.	C.G.	H.G.	Please select
24.5	99.6	99.8	ZmAffx.1279.1.S1_s_at	11990232-67	-	-	3e+0	At4g34080	unknown protein	O.I.	C.G.	H.G.	Please select
24.5	99.6	78.7	ZmAffx.1363.1.S1_at	11990232-91	-	-	0	Atcg01110	-	O.I.	C.G.	H.G.	Please select
24.4	99.6	0.7	Zm.9387.1.A1_at	BM268482	Hypothetical protein LOC100193233	-	4e+0	At4g09440	unknown protein	O.I.	C.G.	H.G.	Please select
24.3	99.6	0.2	Zm.8774.1.A1_at	BM075843	-	-	5e+0	At5g20100	unknown protein	O.I.	C.G.	H.G.	Please select
24.1	99.6	55.6	ZmAffx.741.1.S1_at	AI665644	-	-	5e-3	Atcg00810	-	O.I.	C.G.	H.G.	Please select
24.1	99.6	6.4	ZmAffx.690.1.A1_at	AI737303	-	-	1e+1	At5g64040	PSAN	O.I.	C.G.	H.G.	Please select
24.0	99.5	3.6	Zm.6947.1.A1_at	AI065832	-	-	4e+0	At3g05935	unknown protein	O.I.	C.G.	H.G.	Please select
24.0	99.5	0.0	ZmAffx.391.1.A1_at	AI676819	-	-	1e-2	At2g25685	SCRL17 (SCR-Like 17)	O.I.	C.G.	H.G.	Please select
23.9	99.5	65.7	ZmAffx.1332.1.S1_s_at	11990232-80	-	-	1e+0	At3g24465	-	O.I.	C.G.	H.G.	Please select
23.7	99.5	4.5	ZmAffx.201.1.A1_at	AI670148	-	-	3e+0	At2g27740	unknown protein	O.I.	C.G.	H.G.	Please select
23.6	99.5	12.8	Zm.15924.1.A1_at	CB351029	-	-	6e-2	At4g00880	auxin-responsive family protein	O.I.	C.G.	H.G.	Please select
23.5	99.5	96.4	ZmAffx.26.1.S1_at	AI621976	30S ribosomal protein S7	-	5e-37	Atcg00900	-	O.I.	C.G.	H.G.	Please select
23.4	99.5	81.3	ZmAffx.1427.1.S1_at	11990232-12	-	-	5e-170	Atcg00190	-	O.I.	C.G.	H.G.	Please select
23.4	99.5	13.5	ZmAffx.201.1.S1_at	AI670148	-	-	3e+0	At2g27740	unknown protein	O.I.	C.G.	H.G.	Please select
23.4	99.5	6.6	Zm.16524.8.A1_at	AI665572	-	-	3e-3	At1g02405	proline-rich family protein	O.I.	C.G.	H.G.	Please select
23.3	99.5	0.1	Zm.10800.2.S1_at	CF349123	-	-	3e-1	At3g62130	epimerase-related	O.I.	C.G.	H.G.	Please select
23.2	99.5	99.9	ZmAffx.1434.1.S1_at	11990232-19	-	-	0	Atcg00120	-	O.I.	C.G.	H.G.	Please select
23.2	99.5	77.6	ZmAffx.1092.1.A1_at	AW066155	-	-	1e-107	Atcg00490	-	O.I.	C.G.	H.G.	Please select
22.9	99.5	33.4	ZmAffx.666.1.A1_at	AI734351	-	-	3e+0	At5g56795	MT1B	O.I.	C.G.	H.G.	Please select
22.9	99.5	0.0	ZmAffx.609.1.S1_at	AI715037	-	-	3e+0	At2g26520	unknown protein	O.I.	C.G.	H.G.	Please select
22.8	99.5	0.9	Zm.2934.1.S1_at	CF033378	-	-	2e+0	At4g24973	-	O.I.	C.G.	H.G.	Please select
22.8	99.5	0.8	ZmAffx.34.1.A1_at	AI657433	-	-	2e+0	At4g24470	TIFY1	O.I.	C.G.	H.G.	Please select
22.7	99.5	116.2	ZmAffx.549.1.S1_at	AI712143	-	-	3e+0	At1g22067	unknown protein	O.I.	C.G.	H.G.	Please select
22.6	99.5	41.0	ZmAffx.666.1.S1_at	AI734351	-	-	3e+0	At5g56795	MT1B	O.I.	C.G.	H.G.	Please select
22.5	99.5	100.6	AFFX-Zm_18SrRNA_at	AFFX-Zm_18SrRNA	-	-	0			O.I.	C.G.	H.G.	Please select
22.3	99.5	176.9	ZmAffx.1216.1.S1_at	1314400	-	-	2e+1	At5g64540	unknown protein	O.I.	C.G.	H.G.	Please select
22.1	99.4	67.9	ZmAffx.1487.1.S1_at	11990232-44	-	-	8e-13	Atcg00660	-	O.I.	C.G.	H.G.	Please select
22.1	99.4	55.6	ZmAffx.986.1.S1_at	AI834598	-	-	8e-1	At5g10260	AtRABH1e (Arabidopsis Rab GTPase homolog H1e)	O.I.	C.G.	H.G.	Please select
22.1	99.4	23.3	Zm.10030.1.S1_at	CO532943	hypothetical protein LOC100192860	-	3e-1	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	O.I.	C.G.	H.G.	Please select
22.1	99.4	0.5	ZmAffx.771.1.S1_at	AI746147	-	-	8e-1	At1g67920	unknown protein	O.I.	C.G.	H.G.	Please select
21.7	99.4	42.5	Zm.16594.4.S1_at	AW231557	-	-	3e+0	At4g17870	-	O.I.	C.G.	H.G.	Please select
21.4	99.4	0.1	ZmAffx.1074.1.A1_at	AI947680	-	-	1e+1	At2g42210	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	C.G.	H.G.	Please select
21.3	99.4	0.1	Zm.6821.1.A1_at	AI396519	hypothetical protein LOC100272815	-	7e+0	At3g44805	-	O.I.	C.G.	H.G.	Please select
21.2	99.4	198.1	ZmAffx.1216.1.S1_x_at	1314400	-	-	2e+1	At5g64540	unknown protein	O.I.	C.G.	H.G.	Please select

Back to the CoP portal site

Back to the KAGIANA project homepage