Microarray experiments to specifically-expressed genes

GSM ID	GSM320455
Assay name	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3
GSE experiment	GSE12770: Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
127.3	100.0	0.0	Zm.1389.2.A1_at	AI737173	-	-	2e+0	At1g18720	unknown protein	O.I.	C.G.	H.G.	Please select
118.2	100.0	0.2	ZmAffx.1194.1.A1_at	BE025369	-	-	4e+0	At5g59990	-	O.I.	C.G.	H.G.	Please select
100.2	100.0	2.2	Zm.6304.1.A1_a_at	AI714476	dnaJ domain containing protein	-	3e-1	At1g28160	ethylene-responsive element-binding family protein	O.I.	C.G.	H.G.	Please select
89.8	100.0	0.2	ZmAffx.108.1.A1_at	AI665554	Hypothetical protein LOC100191707	-	8e-1	At5g39640	unknown protein	O.I.	C.G.	H.G.	Please select
84.0	100.0	0.7	Zm.4741.2.A1_x_at	BE345072	-	-	4e+0	At4g30460	glycine-rich protein	O.I.	C.G.	H.G.	Please select
83.6	100.0	1.1	Zm.5851.7.A1_a_at	X85335.1	ZEM3	-	7e-6	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
81.2	100.0	0.6	Zm.6313.1.A1_at	AI691341	-	-	2e-2	At4g17500	ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)	O.I.	C.G.	H.G.	Please select
79.0	100.0	0.0	ZmAffx.846.1.A1_at	AI770616	-	-	2e+0	At3g58150	-	O.I.	C.G.	H.G.	Please select
76.0	100.0	0.1	Zm.1389.2.S1_at	AI737173	-	-	2e+0	At1g18720	unknown protein	O.I.	C.G.	H.G.	Please select
75.6	100.0	0.3	Zm.15104.1.A1_at	AI065711	-	-	2e-1	At3g05080	unknown protein	O.I.	C.G.	H.G.	Please select
75.2	100.0	6.4	Zm.19063.1.S1_at	CO532335	hypothetical protein LOC100274479	-	2e-1	At5g58140	PHOT2 (PHOTOTROPIN 2)	O.I.	C.G.	H.G.	Please select
74.4	100.0	3.1	Zm.18903.1.A1_at	CO530915	-	-	7e-2	At5g07400	forkhead-associated domain-containing protein / FHA domain-containing protein	O.I.	C.G.	H.G.	Please select
73.8	100.0	0.3	ZmAffx.374.1.S1_at	AI673895	-	-	3e-9	At1g06515	unknown protein	O.I.	C.G.	H.G.	Please select
73.2	100.0	0.3	Zm.130.1.S1_at	AB014475.1	root cap-specific glycine-rich protein	-	4e-1	At1g61750	-	O.I.	C.G.	H.G.	Please select
72.0	100.0	1.7	Zm.5851.10.A1_a_at	X85336.1	ZEM3	-	2e-9	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
71.9	100.0	0.9	Zm.1201.1.A1_at	BE519056	-	-	3e+1	At5g66070	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
71.8	100.0	0.4	Zm.15507.1.A1_at	CA405254	-	-	1e+0	At4g38170	FRS9 (FAR1-related sequence 9)	O.I.	C.G.	H.G.	Please select
71.8	100.0	0.0	ZmAffx.323.1.S1_at	AI670505	-	-	3e+0	At5g06800	myb family transcription factor	O.I.	C.G.	H.G.	Please select
71.6	100.0	0.4	Zm.6287.1.A1_at	AI691262	-	-	3e+0	At3g51020	unknown protein	O.I.	C.G.	H.G.	Please select
71.0	100.0	0.2	Zm.13135.1.S1_at	CA404788	-	-	4e-5	At5g45550	mob1/phocein family protein	O.I.	C.G.	H.G.	Please select
69.5	100.0	4.8	Zm.15732.1.A1_a_at	AY104940.1	hypothetical protein LOC100280046	-	6e-9	At3g06980	DEAD/DEAH box helicase, putative	O.I.	C.G.	H.G.	Please select
69.5	100.0	3.6	Zm.8436.1.A1_at	BM074113	-	-	5e+0	At3g22900	NRPD7	O.I.	C.G.	H.G.	Please select
69.4	100.0	0.2	ZmAffx.899.1.S1_at	AI770892	-	-	8e-1	At5g40981	unknown protein	O.I.	C.G.	H.G.	Please select
69.2	100.0	0.4	Zm.6244.2.S1_at	AI677548	-	-	8e-1	At2g43350	ATGPX3 (GLUTATHIONE PEROXIDASE 3)	O.I.	C.G.	H.G.	Please select
69.1	100.0	0.1	Zm.1885.1.A1_at	AW498349	-	-	1e+1	At5g45550	mob1/phocein family protein	O.I.	C.G.	H.G.	Please select
68.5	100.0	2.8	Zm.9897.1.A1_at	BM331892	hypothetical protein LOC100279693	-	6e-3	At2g34850	MEE25 (maternal effect embryo arrest 25)	O.I.	C.G.	H.G.	Please select
68.5	100.0	0.7	ZmAffx.970.1.S1_at	AI833868	-	-	8e-1	At3g10405	unknown protein	O.I.	C.G.	H.G.	Please select
68.1	100.0	0.5	Zm.17621.1.S1_at	CK368339	-	-	5e+0	At2g17740	DC1 domain-containing protein	O.I.	C.G.	H.G.	Please select
67.6	100.0	0.3	Zm.5851.14.A1_at	BE453943	-	-	9e-2	At1g75270	DHAR2 (DEHYDROASCORBATE REDUCTASE 2)	O.I.	C.G.	H.G.	Please select
67.6	100.0	0.2	Zm.65.1.S1_at	AJ007366.1	calcium-dependent protein kinase	-	2e-12	At5g04870	CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)	O.I.	C.G.	H.G.	Please select
67.2	100.0	0.0	Zm.13870.2.S1_s_at	AF099435.1	R2R3MYB-domain protein	-	2e-5	At5g40330	MYB23 (MYB DOMAIN PROTEIN 23)	O.I.	C.G.	H.G.	Please select
66.8	100.0	10.2	RPTR-Zm-M15077-1_at	RPTR-Zm-M15077-1	-	-	0			O.I.	C.G.	H.G.	Please select
66.4	100.0	0.4	ZmAffx.522.1.A1_at	AI711639	-	-	3e+0	At5g40650	SDH2-2	O.I.	C.G.	H.G.	Please select
66.1	100.0	4.8	Zm.18399.1.A1_at	CO534452	-	-	2e+0	At5g15560	unknown protein	O.I.	C.G.	H.G.	Please select
66.1	100.0	0.2	Zm.15911.1.S1_at	AY110690.1	-	-	1e+0	At5g47960	ATRABA4C	O.I.	C.G.	H.G.	Please select
65.7	100.0	0.1	Zm.16976.1.S1_at	CA404460	-	-	2e-10	At1g68410	protein phosphatase 2C-related / PP2C-related	O.I.	C.G.	H.G.	Please select
65.2	100.0	0.5	Zm.10002.1.A1_a_at	BM351261	-	-	2e+0	At1g67060	unknown protein	O.I.	C.G.	H.G.	Please select
65.1	100.0	0.0	Zm.18052.2.A1_at	CK720527	Hypothetical protein LOC100193896	-	5e+0	At5g63310	NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)	O.I.	C.G.	H.G.	Please select
64.9	100.0	2.2	Zm.1218.1.A1_at	BM267451	-	-	1e+0	At4g21970	unknown protein	O.I.	C.G.	H.G.	Please select
64.9	100.0	0.2	ZmAffx.154.1.S1_at	AI668116	-	-	3e+0	At5g24655	LSU4 (RESPONSE TO LOW SULFUR 4)	O.I.	C.G.	H.G.	Please select
64.3	100.0	0.1	Zm.18093.1.A1_at	CK347651	-	-	7e+0	At3g27250	unknown protein	O.I.	C.G.	H.G.	Please select
64.3	100.0	0.0	ZmAffx.286.1.S1_at	AI670419	-	-	2e-1	At1g07745	RAD51D (ARABIDOPSIS HOMOLOG OF RAD51 D)	O.I.	C.G.	H.G.	Please select
63.7	100.0	0.3	Zm.18064.1.A1_at	CK347702	-	-	1e+0	At1g66145	CLE18 (CLAVATA3/ESR-RELATED 18)	O.I.	C.G.	H.G.	Please select
63.2	100.0	1.0	Zm.3219.3.A1_at	AY109877.1	-	-	2e-119	At2g29630	THIC (ThiaminC)	O.I.	C.G.	H.G.	Please select
62.9	100.0	0.4	ZmAffx.522.1.S1_at	AI711639	-	-	3e+0	At5g40650	SDH2-2	O.I.	C.G.	H.G.	Please select
62.7	100.0	6.9	Zm.5466.3.A1_at	AI665910	hypothetical protein LOC100276605	-	9e-2	At1g20450	ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10)	O.I.	C.G.	H.G.	Please select
62.5	100.0	0.3	Zm.15873.1.A1_at	BM339859	IDP1704 protein	-	8e-5	At1g63180	UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)	O.I.	C.G.	H.G.	Please select
62.4	100.0	13.7	RPTR-Zm-M15077-1_s_at	RPTR-Zm-M15077-1	-	-	0			O.I.	C.G.	H.G.	Please select
62.4	100.0	0.2	ZmAffx.162.1.S1_at	AI668180	Hypothetical protein LOC100193115	-	2e-1	At2g27240	unknown protein	O.I.	C.G.	H.G.	Please select
62.3	100.0	0.4	Zm.9738.1.S1_at	BM337426	-	-	2e+0	At3g53200	AtMYB27 (myb domain protein 27)	O.I.	C.G.	H.G.	Please select
61.7	100.0	3.9	ZmAffx.466.1.S1_at	AI677405	-	-	8e-4	At1g52870	peroxisomal membrane protein-related	O.I.	C.G.	H.G.	Please select
61.7	100.0	0.3	Zm.18873.2.S1_at	AI670642	-	-	1e+0	At5g08150	unknown protein	O.I.	C.G.	H.G.	Please select
61.6	100.0	0.4	Zm.5851.14.S1_at	BE453943	-	-	9e-2	At1g75270	DHAR2 (DEHYDROASCORBATE REDUCTASE 2)	O.I.	C.G.	H.G.	Please select
61.4	100.0	0.4	Zm.2175.1.S1_at	AW288761	hypothetical protein LOC100278437	-	7e-1	At2g35470	unknown protein	O.I.	C.G.	H.G.	Please select
61.1	100.0	5.4	Zm.5466.2.A1_at	AY108444.1	-	-	1e+0	At3g17520	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	O.I.	C.G.	H.G.	Please select
60.9	100.0	0.5	Zm.2041.2.A1_at	H35882	Hypothetical protein LOC100191381	-	3e+0	At5g37870	seven in absentia (SINA) family protein	O.I.	C.G.	H.G.	Please select
60.7	100.0	0.1	Zm.10341.1.S1_at	AF443598.1	enhancer of zeste-like protein 3	-	3e-20	At4g02020	SWN (SWINGER)	O.I.	C.G.	H.G.	Please select
60.3	100.0	1.0	Zm.16481.1.S1_at	CF569029	-	-	5e+0	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	O.I.	C.G.	H.G.	Please select
59.8	100.0	0.7	Zm.17746.1.A1_at	CF634651	-	-	1e+0	At3g04540	-	O.I.	C.G.	H.G.	Please select
59.7	100.0	2.1	ZmAffx.1126.1.A1_at	AW313158	-	-	3e+0	At2g28605	-	O.I.	C.G.	H.G.	Please select
59.3	100.0	1.8	Zm.9670.1.S1_at	CF050063	-	-	8e-3	At5g48810	CB5-D (CYTOCHROME B5 ISOFORM D)	O.I.	C.G.	H.G.	Please select
59.0	100.0	1.2	ZmAffx.37.1.S1_at	AI657467	-	-	5e+0	At3g21338	unknown protein	O.I.	C.G.	H.G.	Please select
58.8	100.0	0.7	Zm.2286.1.S1_at	BF728284	-	-	1e+0	At1g80700	unknown protein	O.I.	C.G.	H.G.	Please select
58.8	100.0	0.2	Zm.14692.1.A1_at	BQ539260	-	-	5e+0	At1g09195	-	O.I.	C.G.	H.G.	Please select
58.8	100.0	0.2	Zm.6155.3.S1_a_at	AI665650	-	-	5e-9	At3g05530	RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)	O.I.	C.G.	H.G.	Please select
58.7	100.0	1.4	ZmAffx.1126.1.S1_at	AW313158	-	-	3e+0	At2g28605	-	O.I.	C.G.	H.G.	Please select
58.6	100.0	3.9	Zm.15732.1.A1_x_at	AY104940.1	-	-	6e-9	At3g06980	DEAD/DEAH box helicase, putative	O.I.	C.G.	H.G.	Please select
58.2	100.0	0.4	ZmAffx.899.1.A1_at	AI770892	-	-	8e-1	At5g40981	unknown protein	O.I.	C.G.	H.G.	Please select
57.8	100.0	1.5	Zm.15334.1.A1_at	CB351107	hypothetical protein LOC100277432	-	5e+0	At1g01570	fringe-related protein	O.I.	C.G.	H.G.	Please select
57.1	100.0	0.5	ZmAffx.816.1.A1_at	AI770437	-	-	3e+0	At3g12977	DNA binding	O.I.	C.G.	H.G.	Please select
57.0	100.0	0.9	Zm.5851.12.A1_at	BI644197	hypothetical protein LOC100275208	-	2e+0	At3g49460	60S acidic ribosomal protein-related	O.I.	C.G.	H.G.	Please select
56.9	100.0	0.3	Zm.2969.1.A1_at	AW119986	plant integral membrane protein TIGR01569 containing protein	-	1e-2	At5g15290	integral membrane family protein	O.I.	C.G.	H.G.	Please select
56.8	100.0	0.6	Zm.5787.2.A1_at	AY107157.1	-	-	4e-1	At5g48790	unknown protein	O.I.	C.G.	H.G.	Please select
56.8	100.0	0.3	ZmAffx.203.1.S1_at	AI670154	-	-	6e-23	At2g20140	26S protease regulatory complex subunit 4, putative	O.I.	C.G.	H.G.	Please select
56.7	100.0	0.9	Zm.5466.2.S1_a_at	AY108444.1	hypothetical protein LOC100276605	-	1e+0	At3g17520	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	O.I.	C.G.	H.G.	Please select
56.4	100.0	1.6	Zm.4767.1.A1_at	AI739901	glutamyl-tRNA synthetase, cytoplasmic	-	3e+0	At3g50900	unknown protein	O.I.	C.G.	H.G.	Please select
56.3	100.0	0.9	Zm.4862.2.A1_at	AI666004	-	-	2e+0	At2g23920	unknown protein	O.I.	C.G.	H.G.	Please select
56.2	100.0	0.1	ZmAffx.762.1.S1_at	AI746038	-	-	8e-1	At1g78895	-	O.I.	C.G.	H.G.	Please select
55.8	100.0	0.6	Zm.11191.1.A1_at	BM339959	-	-	6e-7	At1g15520	PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)	O.I.	C.G.	H.G.	Please select
55.8	100.0	0.2	ZmAffx.1117.1.A1_at	AW257962	-	-	2e+0	At3g15150	zinc ion binding	O.I.	C.G.	H.G.	Please select
55.6	100.0	2.6	Zm.17778.1.S1_at	CK370487	-	-	1e-3	At1g77020	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	H.G.	Please select
55.2	100.0	1.7	Zm.16240.1.A1_at	BM267199	-	-	5e+0	At2g20585	NFD6 (NUCLEAR FUSION DEFECTIVE 6)	O.I.	C.G.	H.G.	Please select
54.9	100.0	0.3	Zm.10896.1.S1_at	AY106661.1	-	-	2e-1	At2g23920	unknown protein	O.I.	C.G.	H.G.	Please select
54.7	100.0	0.6	Zm.13589.1.A1_at	AY107793.1	-	-	1e+0	At3g04920	40S ribosomal protein S24 (RPS24A)	O.I.	C.G.	H.G.	Please select
54.6	100.0	2.2	ZmAffx.1148.1.A1_at	AW424424	Hypothetical protein LOC100193074	-	7e+0	At1g77885	unknown protein	O.I.	C.G.	H.G.	Please select
54.5	100.0	1.3	Zm.3270.1.A1_at	BE638734	-	-	8e-1	At2g27315	unknown protein	O.I.	C.G.	H.G.	Please select
54.5	100.0	0.2	Zm.3797.1.S1_at	BU097764	pollen allergen Phl p 11	-	8e+0	At5g48720	XRI1 (X-RAY INDUCED TRANSCRIPT 1)	O.I.	C.G.	H.G.	Please select
54.4	100.0	0.8	Zm.10426.2.A1_at	AI668524	-	-	3e+0	At2g40610	ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)	O.I.	C.G.	H.G.	Please select
54.4	100.0	0.5	Zm.10338.1.S1_at	CA827503	-	-	6e+0	At5g24165	unknown protein	O.I.	C.G.	H.G.	Please select
54.3	100.0	0.8	Zm.3796.1.A1_at	BG836961	Hypothetical protein LOC100192039	-	8e-1	At2g32765	SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5)	O.I.	C.G.	H.G.	Please select
54.3	100.0	0.1	Zm.9328.1.A1_at	BM268103	12-oxo-phytodienoic acid reductase	-	1e+0	At1g76690	OPR2	O.I.	C.G.	H.G.	Please select
54.2	100.0	0.3	ZmAffx.662.1.S1_at	AI734287	-	-	1e-1	At4g27750	ISI1 (IMPAIRED SUCROSE INDUCTION 1)	O.I.	C.G.	H.G.	Please select
54.1	100.0	0.0	ZmAffx.615.1.S1_at	AI715043	-	-	3e+0	At5g42790	PAF1	O.I.	C.G.	H.G.	Please select
54.0	100.0	0.6	Zm.4505.1.S1_at	AY111153.1	-	-	2e-2	At3g55600	-	O.I.	C.G.	H.G.	Please select
54.0	100.0	0.5	Zm.15502.1.S1_at	CD436477	-	-	1e-2	At3g23900	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.	Please select
54.0	100.0	0.3	Zm.11627.1.A1_x_at	BM379409	-	-	1e+0	At2g26260	AT3BETAHSD/D2 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2)	O.I.	C.G.	H.G.	Please select
53.9	100.0	0.5	Zm.14646.1.A1_at	CB350757	-	-	2e+0	At3g46910	ubiquitin protein ligase binding	O.I.	C.G.	H.G.	Please select
53.8	100.0	9.4	Zm.18189.1.S1_at	CN844773	hypothetical protein LOC100278018	-	6e+0	At1g51402	unknown protein	O.I.	C.G.	H.G.	Please select
53.7	100.0	0.7	Zm.9114.1.A1_at	BM335298	-	-	1e+0	At2g47110	UBQ6	O.I.	C.G.	H.G.	Please select
53.4	100.0	0.3	Zm.6506.1.A1_a_at	AI714910	replication protein A 70 kDa DNA-binding subunit	-	1e-10	At5g08020	RPA70B (RPA70-KDA SUBUNIT B)	O.I.	C.G.	H.G.	Please select

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