Microarray experiments to specifically-expressed genes

GSM ID	GSM320454
Assay name	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2
GSE experiment	GSE12770: Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
78.8	100.0	0.1	ZmAffx.108.1.A1_at	AI665554	Hypothetical protein LOC100191707	-	8e-1	At5g39640	unknown protein	O.I.	C.G.	H.G.	Please select
75.8	100.0	0.2	Zm.557.1.A1_at	AF244697.1	glutathione S-transferase GST 32	-	3e-2	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	O.I.	C.G.	H.G.	Please select
72.5	100.0	0.4	Zm.15507.1.A1_at	CA405254	-	-	1e+0	At4g38170	FRS9 (FAR1-related sequence 9)	O.I.	C.G.	H.G.	Please select
71.5	100.0	0.1	Zm.18106.1.A1_at	AY367051.1	scarecrow-like 23	-	3e+1	At5g05550	transcription factor	O.I.	C.G.	H.G.	Please select
71.2	100.0	0.8	ZmAffx.970.1.S1_at	AI833868	-	-	8e-1	At3g10405	unknown protein	O.I.	C.G.	H.G.	Please select
69.8	100.0	0.9	Zm.1201.1.A1_at	BE519056	-	-	3e+1	At5g66070	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
69.7	100.0	0.9	Zm.5851.7.A1_a_at	X85335.1	ZEM3	-	7e-6	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
68.8	100.0	0.2	Zm.4822.1.S1_at	AY104398.1	-	-	1e+0	At3g27400	pectate lyase family protein	O.I.	C.G.	H.G.	Please select
68.6	100.0	0.2	ZmAffx.89.1.S1_at	AI665353	-	-	1e+1	At5g20560	beta-1,3-glucanase, putative	O.I.	C.G.	H.G.	Please select
68.3	100.0	10.4	RPTR-Zm-M15077-1_at	RPTR-Zm-M15077-1	-	-	0			O.I.	C.G.	H.G.	Please select
68.2	100.0	0.3	Zm.130.1.S1_at	AB014475.1	root cap-specific glycine-rich protein	-	4e-1	At1g61750	-	O.I.	C.G.	H.G.	Please select
68.1	100.0	1.6	Zm.5851.10.A1_a_at	X85336.1	ZEM3	-	2e-9	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
68.0	100.0	0.2	Zm.15698.1.S1_at	CD441191	Hypothetical protein LOC100216937	-	3e+0	At4g15765	electron carrier/ monooxygenase/ oxidoreductase	O.I.	C.G.	H.G.	Please select
67.8	100.0	11.9	Zm.18189.1.S1_at	CN844773	hypothetical protein LOC100278018	-	6e+0	At1g51402	unknown protein	O.I.	C.G.	H.G.	Please select
66.9	100.0	14.6	RPTR-Zm-M15077-1_s_at	RPTR-Zm-M15077-1	-	-	0			O.I.	C.G.	H.G.	Please select
65.8	100.0	3.4	Zm.8436.1.A1_at	BM074113	-	-	5e+0	At3g22900	NRPD7	O.I.	C.G.	H.G.	Please select
64.6	100.0	0.2	Zm.16025.2.A1_at	CF630160	-	-	4e+0	At5g42700	transcriptional factor B3 family protein	O.I.	C.G.	H.G.	Please select
63.8	100.0	0.1	Zm.1699.1.S1_at	BF728372	-	-	5e-45	At3g20290	ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)	O.I.	C.G.	H.G.	Please select
63.6	100.0	0.5	Zm.17621.1.S1_at	CK368339	-	-	5e+0	At2g17740	DC1 domain-containing protein	O.I.	C.G.	H.G.	Please select
60.9	100.0	4.4	Zm.18399.1.A1_at	CO534452	-	-	2e+0	At5g15560	unknown protein	O.I.	C.G.	H.G.	Please select
60.1	100.0	0.4	Zm.6128.1.A1_at	CK370955	Hypothetical protein LOC100193503	-	5e-6	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	H.G.	Please select
59.2	100.0	1.1	Zm.5851.8.A1_a_at	X85334.1	MADS box protein	-	1e-7	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
59.1	100.0	0.0	Zm.9911.1.A1_at	BM348708	-	-	7e-1	At3g12140	emsy N terminus domain-containing protein / ENT domain-containing protein	O.I.	C.G.	H.G.	Please select
58.8	100.0	0.9	Zm.16481.1.S1_at	CF569029	-	-	5e+0	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	O.I.	C.G.	H.G.	Please select
57.7	100.0	0.4	Zm.6313.1.A1_at	AI691341	-	-	2e-2	At4g17500	ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)	O.I.	C.G.	H.G.	Please select
57.2	100.0	0.3	Zm.15425.2.A1_at	CO521234	-	-	4e-1	At1g09760	U2A' (U2 small nuclear ribonucleoprotein A)	O.I.	C.G.	H.G.	Please select
57.0	100.0	1.6	ZmAffx.1118.2.S1_at	AW267189	-	-	8e-1	At2g27360	lipase, putative	O.I.	C.G.	H.G.	Please select
56.8	100.0	3.6	Zm.8751.1.A1_at	BM348137	-	-	1e+0	At3g05700	-	O.I.	C.G.	H.G.	Please select
56.5	100.0	0.5	Zm.4741.2.A1_x_at	BE345072	-	-	4e+0	At4g30460	glycine-rich protein	O.I.	C.G.	H.G.	Please select
56.2	100.0	2.3	Zm.18903.1.A1_at	CO530915	-	-	7e-2	At5g07400	forkhead-associated domain-containing protein / FHA domain-containing protein	O.I.	C.G.	H.G.	Please select
55.6	100.0	3.7	Zm.15732.1.A1_x_at	AY104940.1	-	-	6e-9	At3g06980	DEAD/DEAH box helicase, putative	O.I.	C.G.	H.G.	Please select
55.5	100.0	0.0	RPTR-Zm-M10961-2_s_at	RPTR-Zm-M10961-2	-	-	0			O.I.	C.G.	H.G.	Please select
55.4	100.0	0.0	ZmAffx.185.1.S1_at	AI668356	-	-	1e+1	At5g58220	TTL (Transthyretin-Like protein)	O.I.	C.G.	H.G.	Please select
54.3	100.0	0.1	Zm.3767.1.S1_at	AY105916.1	-	-	3e-2	At4g27790	calcium-binding EF hand family protein	O.I.	C.G.	H.G.	Please select
54.2	100.0	0.3	Zm.2969.1.A1_at	AW119986	plant integral membrane protein TIGR01569 containing protein	-	1e-2	At5g15290	integral membrane family protein	O.I.	C.G.	H.G.	Please select
53.7	100.0	0.1	Zm.1389.2.S1_at	AI737173	-	-	2e+0	At1g18720	unknown protein	O.I.	C.G.	H.G.	Please select
53.4	100.0	1.8	Zm.1218.1.A1_at	BM267451	-	-	1e+0	At4g21970	unknown protein	O.I.	C.G.	H.G.	Please select
52.8	100.0	0.0	ZmAffx.647.1.S1_at	AI715075	-	-	3e+0	At2g28500	LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)	O.I.	C.G.	H.G.	Please select
52.7	100.0	0.4	Zm.2047.1.S1_at	AJ006541	-	-	6e-1	At5g65890	ACR1 (ACT Domain Repeat 1)	O.I.	C.G.	H.G.	Please select
51.9	100.0	0.1	ZmAffx.899.1.S1_at	AI770892	-	-	8e-1	At5g40981	unknown protein	O.I.	C.G.	H.G.	Please select
51.8	100.0	11.4	Zm.8708.1.S1_at	BQ577521	-	-	2e+1	At4g01150	unknown protein	O.I.	C.G.	H.G.	Please select
51.8	100.0	1.1	Zm.6304.1.A1_a_at	AI714476	dnaJ domain containing protein	-	3e-1	At1g28160	ethylene-responsive element-binding family protein	O.I.	C.G.	H.G.	Please select
51.7	100.0	1.1	Zm.15430.1.A1_at	AY112559.1	-	-	4e+0	At5g57280	methyltransferase	O.I.	C.G.	H.G.	Please select
51.5	100.0	0.2	ZmAffx.162.1.S1_at	AI668180	Hypothetical protein LOC100193115	-	2e-1	At2g27240	unknown protein	O.I.	C.G.	H.G.	Please select
51.4	100.0	2.6	Zm.2192.1.A1_at	BG841197	-	-	2e-2	At1g48740	iron ion binding / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	O.I.	C.G.	H.G.	Please select
50.6	100.0	4.5	Zm.5466.2.A1_at	AY108444.1	-	-	1e+0	At3g17520	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	O.I.	C.G.	H.G.	Please select
50.6	100.0	0.2	ZmAffx.108.1.S1_at	AI665554	Hypothetical protein LOC100191707	-	8e-1	At5g39640	unknown protein	O.I.	C.G.	H.G.	Please select
50.6	100.0	0.2	ZmAffx.154.1.S1_at	AI668116	-	-	3e+0	At5g24655	LSU4 (RESPONSE TO LOW SULFUR 4)	O.I.	C.G.	H.G.	Please select
50.1	100.0	0.2	Zm.12262.1.S1_at	CA826732	-	-	5e-2	At3g06830	pectinesterase family protein	O.I.	C.G.	H.G.	Please select
49.7	100.0	0.1	Zm.17766.1.S1_at	CK371550	-	-	3e+0	At5g14730	unknown protein	O.I.	C.G.	H.G.	Please select
49.4	100.0	0.2	Zm.13135.1.S1_at	CA404788	-	-	4e-5	At5g45550	mob1/phocein family protein	O.I.	C.G.	H.G.	Please select
49.3	100.0	1.5	Zm.15732.3.S1_a_at	CD441703	-	-	2e+0	At5g18790	ribosomal protein L33 family protein	O.I.	C.G.	H.G.	Please select
49.2	100.0	6.3	Zm.13104.1.S1_at	CA404477	-	-	3e+0	At5g22240	OFP10	O.I.	C.G.	H.G.	Please select
49.2	100.0	0.3	ZmAffx.824.1.A1_at	AI770504	-	-	3e+0	At5g20370	serine-rich protein-related	O.I.	C.G.	H.G.	Please select
47.7	100.0	0.2	Zm.5851.14.A1_at	BE453943	-	-	9e-2	At1g75270	DHAR2 (DEHYDROASCORBATE REDUCTASE 2)	O.I.	C.G.	H.G.	Please select
47.2	100.0	7.3	Zm.188.1.S1_s_at	CF017153	yptm1 protein	-	2e-34	At3g11730	ATFP8	O.I.	C.G.	H.G.	Please select
47.0	100.0	2.2	Zm.17778.1.S1_at	CK370487	-	-	1e-3	At1g77020	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	H.G.	Please select
46.8	100.0	1.0	ZmAffx.37.1.S1_at	AI657467	-	-	5e+0	At3g21338	unknown protein	O.I.	C.G.	H.G.	Please select
46.7	100.0	5.8	Zm.18770.1.S1_at	CO525135	hypothetical protein LOC100280239	-	4e-1	At2g33220	-	O.I.	C.G.	H.G.	Please select
46.4	100.0	7.7	Zm.5680.1.A1_at	CF629045	monocopper oxidase	-	4e+0	At5g58780	dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative	O.I.	C.G.	H.G.	Please select
46.4	100.0	0.2	Zm.1588.1.S1_at	AY344632.1	beta-glucanase	-	5e-9	At3g47050	glycosyl hydrolase family 3 protein	O.I.	C.G.	H.G.	Please select
46.3	100.0	1.3	Zm.6868.1.A1_a_at	AI065511	transposon protein Pong sub-class	-	1e+0	At5g25560	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
46.2	100.0	1.3	Zm.4767.1.A1_at	AI739901	glutamyl-tRNA synthetase, cytoplasmic	-	3e+0	At3g50900	unknown protein	O.I.	C.G.	H.G.	Please select
46.1	100.0	1.0	ZmAffx.37.1.A1_at	AI657467	-	-	5e+0	At3g21338	unknown protein	O.I.	C.G.	H.G.	Please select
46.1	100.0	0.1	ZmAffx.762.1.S1_at	AI746038	-	-	8e-1	At1g78895	-	O.I.	C.G.	H.G.	Please select
45.9	100.0	1.1	ZmAffx.1126.1.S1_at	AW313158	-	-	3e+0	At2g28605	-	O.I.	C.G.	H.G.	Please select
45.7	100.0	0.3	ZmAffx.203.1.S1_at	AI670154	-	-	6e-23	At2g20140	26S protease regulatory complex subunit 4, putative	O.I.	C.G.	H.G.	Please select
45.5	100.0	0.3	Zm.12041.1.A1_at	BM416698	-	-	1e+0	At5g07550	GRP19 (GLYCINE-RICH PROTEIN 19)	O.I.	C.G.	H.G.	Please select
45.4	100.0	1.9	Zm.4504.1.A1_at	AI734488	hypothetical protein LOC100280314	-	3e+0	At1g01230	ORMDL family protein	O.I.	C.G.	H.G.	Please select
45.3	100.0	0.4	Zm.2506.1.A1_at	AW231368	-	-	2e+1	At5g25160	ZFP3 (ZINC FINGER PROTEIN 3)	O.I.	C.G.	H.G.	Please select
45.1	100.0	0.7	Zm.3219.3.A1_at	AY109877.1	-	-	2e-119	At2g29630	THIC (ThiaminC)	O.I.	C.G.	H.G.	Please select
45.1	100.0	0.0	Zm.1389.2.A1_at	AI737173	-	-	2e+0	At1g18720	unknown protein	O.I.	C.G.	H.G.	Please select
45.0	100.0	0.0	Zm.3168.1.A1_at	AW331178	-	-	5e-2	At3g51960	bZIP family transcription factor	O.I.	C.G.	H.G.	Please select
45.0	100.0	0.0	ZmAffx.1163.1.S1_at	AW455638	-	-	4e+0	At4g11630	ribosomal protein L19 family protein	O.I.	C.G.	H.G.	Please select
44.9	100.0	0.0	ZmAffx.1107.1.A1_at	AW216314	-	-	8e-1	At3g19860	basic helix-loop-helix (bHLH) family protein	O.I.	C.G.	H.G.	Please select
44.8	100.0	0.9	Zm.10604.1.A1_at	BM341094	-	-	1e-6	At5g43430	ETFBETA	O.I.	C.G.	H.G.	Please select
44.6	100.0	1.7	Zm.11379.1.A1_at	CB351163	-	-	5e+0	At2g29995	unknown protein	O.I.	C.G.	H.G.	Please select
44.6	100.0	0.7	Zm.5466.2.S1_a_at	AY108444.1	hypothetical protein LOC100276605	-	1e+0	At3g17520	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	O.I.	C.G.	H.G.	Please select
44.4	100.0	6.3	Zm.13201.1.A1_at	CA404601	-	-	4e+0	At4g35690	unknown protein	O.I.	C.G.	H.G.	Please select
44.4	100.0	0.2	Zm.6287.1.A1_at	AI691262	-	-	3e+0	At3g51020	unknown protein	O.I.	C.G.	H.G.	Please select
44.4	100.0	0.1	Zm.757.1.S1_at	BG349429	-	-	3e+0	At4g09070	-	O.I.	C.G.	H.G.	Please select
44.2	100.0	0.3	Zm.2175.1.S1_at	AW288761	hypothetical protein LOC100278437	-	7e-1	At2g35470	unknown protein	O.I.	C.G.	H.G.	Please select
44.1	100.0	0.4	Zm.10002.1.A1_a_at	BM351261	-	-	2e+0	At1g67060	unknown protein	O.I.	C.G.	H.G.	Please select
43.9	100.0	1.5	Zm.16359.1.A1_at	CA828795	-	-	3e-2	At5g26080	proline-rich family protein	O.I.	C.G.	H.G.	Please select
43.9	100.0	1.1	ZmAffx.259.1.S1_s_at	AI668215	Glycine-rich protein	-	9e-1	At5g40970	unknown protein	O.I.	C.G.	H.G.	Please select
43.7	99.9	2.6	Zm.9069.1.A1_at	BM348516	hypothetical protein LOC100216825	-	7e-5	At3g03070	NADH-ubiquinone oxidoreductase-related	O.I.	C.G.	H.G.	Please select
43.7	99.9	0.7	Zm.4862.2.A1_at	AI666004	-	-	2e+0	At2g23920	unknown protein	O.I.	C.G.	H.G.	Please select
43.7	99.9	0.1	Zm.10432.1.S1_at	AY111714.1	-	-	2e+1	At5g24105	AGP41 (ARABINOGALACTAN-PROTEIN 41)	O.I.	C.G.	H.G.	Please select
43.5	99.9	3.5	Zm.13642.1.A1_at	CB605041	-	-	4e+0	At4g32340	-	O.I.	C.G.	H.G.	Please select
43.4	99.9	1.5	ZmAffx.1126.1.A1_at	AW313158	-	-	3e+0	At2g28605	-	O.I.	C.G.	H.G.	Please select
43.4	99.9	0.4	Zm.4619.1.A1_at	CD439136	-	-	1e-10	At4g31120	SKB1 (SHK1 BINDING PROTEIN 1)	O.I.	C.G.	H.G.	Please select
43.3	99.9	0.2	Zm.15873.1.A1_at	BM339859	IDP1704 protein	-	8e-5	At1g63180	UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)	O.I.	C.G.	H.G.	Please select
43.3	99.9	0.1	ZmAffx.1186.1.S1_at	AY110093.1	-	-	2e+0	At5g61200	-	O.I.	C.G.	H.G.	Please select
43.2	99.9	1.1	Zm.5851.8.A1_x_at	X85334.1	MADS box protein	-	1e-7	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
43.2	99.9	0.7	Zm.9771.1.A1_at	BM350274	-	-	2e+0	At3g47160	protein binding / zinc ion binding	O.I.	C.G.	H.G.	Please select
43.2	99.9	0.2	Zm.17333.1.A1_at	CK369962	-	-	3e+0	At5g21280	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	H.G.	Please select
43.1	99.9	0.9	Zm.19152.1.A1_at	CK827126	-	-	5e-8	At4g09570	CPK4	O.I.	C.G.	H.G.	Please select
43.1	99.9	0.4	ZmAffx.470.1.S1_at	AI677420	-	-	8e+0	At4g21745	-	O.I.	C.G.	H.G.	Please select
43.0	99.9	2.7	ZmAffx.466.1.S1_at	AI677405	-	-	8e-4	At1g52870	peroxisomal membrane protein-related	O.I.	C.G.	H.G.	Please select
43.0	99.9	1.4	Zm.7538.1.A1_at	BM337034	hypothetical protein LOC100277956	-	1e+0	At4g03630	root nodule development protein-related	O.I.	C.G.	H.G.	Please select

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