Microarray experiments to specifically-expressed genes

GSM ID	GSM320453
Assay name	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1
GSE experiment	GSE12770: Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
98.8	100.0	0.0	Zm.9819.1.A1_at	BM347727	-	-	3e-1	At4g02725	unknown protein	O.I.	C.G.	H.G.	Please select
85.9	100.0	0.0	ZmAffx.830.1.S1_at	AI770534	-	-	6e+0	At5g40930	TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4)	O.I.	C.G.	H.G.	Please select
80.0	100.0	1.0	Zm.1201.1.A1_at	BE519056	-	-	3e+1	At5g66070	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
79.4	100.0	0.9	ZmAffx.970.1.S1_at	AI833868	-	-	8e-1	At3g10405	unknown protein	O.I.	C.G.	H.G.	Please select
79.1	100.0	0.4	ZmAffx.824.1.A1_at	AI770504	-	-	3e+0	At5g20370	serine-rich protein-related	O.I.	C.G.	H.G.	Please select
77.5	100.0	0.0	Zm.7121.2.S1_at	AF457960.1	-	-	5e-6	At3g12120	FAD2 (FATTY ACID DESATURASE 2)	O.I.	C.G.	H.G.	Please select
76.9	100.0	0.1	ZmAffx.1194.1.A1_at	BE025369	-	-	4e+0	At5g59990	-	O.I.	C.G.	H.G.	Please select
76.8	100.0	0.0	ZmAffx.185.1.S1_at	AI668356	-	-	1e+1	At5g58220	TTL (Transthyretin-Like protein)	O.I.	C.G.	H.G.	Please select
76.2	100.0	0.3	ZmAffx.154.1.S1_at	AI668116	-	-	3e+0	At5g24655	LSU4 (RESPONSE TO LOW SULFUR 4)	O.I.	C.G.	H.G.	Please select
75.8	100.0	0.3	Zm.15104.1.A1_at	AI065711	-	-	2e-1	At3g05080	unknown protein	O.I.	C.G.	H.G.	Please select
75.3	100.0	0.1	ZmAffx.1107.1.A1_at	AW216314	-	-	8e-1	At3g19860	basic helix-loop-helix (bHLH) family protein	O.I.	C.G.	H.G.	Please select
75.2	100.0	5.1	Zm.15732.1.A1_a_at	AY104940.1	hypothetical protein LOC100280046	-	6e-9	At3g06980	DEAD/DEAH box helicase, putative	O.I.	C.G.	H.G.	Please select
74.1	100.0	1.7	Zm.5851.10.A1_a_at	X85336.1	ZEM3	-	2e-9	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
74.0	100.0	0.3	Zm.15425.2.A1_at	CO521234	-	-	4e-1	At1g09760	U2A' (U2 small nuclear ribonucleoprotein A)	O.I.	C.G.	H.G.	Please select
73.4	100.0	0.1	ZmAffx.108.1.A1_at	AI665554	Hypothetical protein LOC100191707	-	8e-1	At5g39640	unknown protein	O.I.	C.G.	H.G.	Please select
72.9	100.0	0.0	Zm.1389.2.A1_at	AI737173	-	-	2e+0	At1g18720	unknown protein	O.I.	C.G.	H.G.	Please select
70.9	100.0	0.9	Zm.5851.7.A1_a_at	X85335.1	ZEM3	-	7e-6	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
70.8	100.0	0.2	Zm.16976.1.S1_at	CA404460	-	-	2e-10	At1g68410	protein phosphatase 2C-related / PP2C-related	O.I.	C.G.	H.G.	Please select
70.5	100.0	3.7	Zm.8436.1.A1_at	BM074113	-	-	5e+0	At3g22900	NRPD7	O.I.	C.G.	H.G.	Please select
68.8	100.0	0.3	Zm.2969.1.A1_at	AW119986	plant integral membrane protein TIGR01569 containing protein	-	1e-2	At5g15290	integral membrane family protein	O.I.	C.G.	H.G.	Please select
68.6	100.0	0.7	Zm.15502.1.S1_at	CD436477	-	-	1e-2	At3g23900	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.	Please select
68.5	100.0	0.4	Zm.6128.1.A1_at	CK370955	Hypothetical protein LOC100193503	-	5e-6	At3g53110	LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)	O.I.	C.G.	H.G.	Please select
67.9	100.0	0.3	Zm.5851.14.A1_at	BE453943	-	-	9e-2	At1g75270	DHAR2 (DEHYDROASCORBATE REDUCTASE 2)	O.I.	C.G.	H.G.	Please select
67.1	100.0	4.9	Zm.18399.1.A1_at	CO534452	-	-	2e+0	At5g15560	unknown protein	O.I.	C.G.	H.G.	Please select
66.4	100.0	0.1	Zm.1389.2.S1_at	AI737173	-	-	2e+0	At1g18720	unknown protein	O.I.	C.G.	H.G.	Please select
65.2	100.0	0.2	Zm.16025.2.A1_at	CF630160	-	-	4e+0	At5g42700	transcriptional factor B3 family protein	O.I.	C.G.	H.G.	Please select
65.1	100.0	0.2	ZmAffx.89.1.S1_at	AI665353	-	-	1e+1	At5g20560	beta-1,3-glucanase, putative	O.I.	C.G.	H.G.	Please select
65.0	100.0	0.3	Zm.2604.1.S1_at	AW066424	-	-	3e-1	At1g75680	AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7)	O.I.	C.G.	H.G.	Please select
65.0	100.0	0.1	ZmAffx.899.1.S1_at	AI770892	-	-	8e-1	At5g40981	unknown protein	O.I.	C.G.	H.G.	Please select
64.7	100.0	14.2	RPTR-Zm-M15077-1_s_at	RPTR-Zm-M15077-1	-	-	0			O.I.	C.G.	H.G.	Please select
64.7	100.0	0.4	Zm.13443.2.A1_at	CK368379	-	-	5e+0	At5g42860	unknown protein	O.I.	C.G.	H.G.	Please select
64.3	100.0	0.6	Zm.17084.1.S1_at	BE056028	-	-	3e+0	At2g40020	-	O.I.	C.G.	H.G.	Please select
64.0	100.0	0.5	Zm.6313.1.A1_at	AI691341	-	-	2e-2	At4g17500	ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)	O.I.	C.G.	H.G.	Please select
63.6	100.0	4.3	Zm.15732.1.A1_x_at	AY104940.1	-	-	6e-9	At3g06980	DEAD/DEAH box helicase, putative	O.I.	C.G.	H.G.	Please select
63.3	100.0	2.1	Zm.1218.1.A1_at	BM267451	-	-	1e+0	At4g21970	unknown protein	O.I.	C.G.	H.G.	Please select
63.1	100.0	0.2	Zm.15698.1.S1_at	CD441191	Hypothetical protein LOC100216937	-	3e+0	At4g15765	electron carrier/ monooxygenase/ oxidoreductase	O.I.	C.G.	H.G.	Please select
62.6	100.0	5.5	Zm.5466.2.A1_at	AY108444.1	-	-	1e+0	At3g17520	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	O.I.	C.G.	H.G.	Please select
62.4	100.0	1.9	Zm.15732.3.S1_a_at	CD441703	-	-	2e+0	At5g18790	ribosomal protein L33 family protein	O.I.	C.G.	H.G.	Please select
62.4	100.0	0.0	Zm.9911.1.A1_at	BM348708	-	-	7e-1	At3g12140	emsy N terminus domain-containing protein / ENT domain-containing protein	O.I.	C.G.	H.G.	Please select
61.5	100.0	1.0	Zm.3192.1.A1_at	BM079059	Hypothetical protein LOC100216902	-	2e+1	At5g64040	PSAN	O.I.	C.G.	H.G.	Please select
61.5	100.0	1.0	Zm.5466.2.S1_a_at	AY108444.1	hypothetical protein LOC100276605	-	1e+0	At3g17520	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	O.I.	C.G.	H.G.	Please select
61.4	100.0	3.7	Zm.14789.2.S1_a_at	BM380358	hypothetical protein LOC100193117 /// hypothetical protein LOC100279921	-	3e-1	At4g15150	glycine-rich protein	O.I.	C.G.	H.G.	Please select
61.3	100.0	0.5	Zm.17621.1.S1_at	CK368339	-	-	5e+0	At2g17740	DC1 domain-containing protein	O.I.	C.G.	H.G.	Please select
61.0	100.0	0.8	Zm.11827.1.A1_at	BM381077	hypothetical protein LOC100192043	-	4e+0	At3g55820	-	O.I.	C.G.	H.G.	Please select
60.7	100.0	0.2	ZmAffx.577.1.S1_at	AI714809	-	-	2e+0	At1g80745	unknown protein	O.I.	C.G.	H.G.	Please select
60.4	100.0	0.2	Zm.4822.1.S1_at	AY104398.1	-	-	1e+0	At3g27400	pectate lyase family protein	O.I.	C.G.	H.G.	Please select
60.3	100.0	0.3	Zm.6287.1.A1_at	AI691262	-	-	3e+0	At3g51020	unknown protein	O.I.	C.G.	H.G.	Please select
60.3	100.0	0.2	ZmAffx.374.1.S1_at	AI673895	-	-	3e-9	At1g06515	unknown protein	O.I.	C.G.	H.G.	Please select
60.1	100.0	0.8	Zm.17314.1.S1_at	CK369303	hypothetical protein LOC100277063	-	3e+0	At4g19620	unknown protein	O.I.	C.G.	H.G.	Please select
59.9	100.0	0.5	ZmAffx.917.1.S1_at	AI782944	-	-	1e+1	At5g26810	pectinesterase family protein	O.I.	C.G.	H.G.	Please select
59.9	100.0	0.1	Zm.10249.1.A1_at	BM497740	-	-	1e-1	At2g35460	harpin-induced family protein / HIN1 family protein / harpin-responsive family protein	O.I.	C.G.	H.G.	Please select
59.7	100.0	1.0	Zm.16481.1.S1_at	CF569029	-	-	5e+0	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	O.I.	C.G.	H.G.	Please select
59.2	100.0	1.2	Zm.16247.1.S1_at	AY181209.1	cold acclimation protein COR413-TM1	-	1e+1	At4g17480	palmitoyl protein thioesterase family protein	O.I.	C.G.	H.G.	Please select
59.1	100.0	4.0	Zm.13947.3.S1_at	AY106410.1	-	-	3e-16	At5g21326	protein kinase family protein / NAF domain-containing protein	O.I.	C.G.	H.G.	Please select
59.1	100.0	0.9	Zm.3219.3.A1_at	AY109877.1	-	-	2e-119	At2g29630	THIC (ThiaminC)	O.I.	C.G.	H.G.	Please select
59.1	100.0	0.1	ZmAffx.762.1.A1_at	AI746038	-	-	8e-1	At1g78895	-	O.I.	C.G.	H.G.	Please select
58.9	100.0	2.0	ZmAffx.1126.1.A1_at	AW313158	-	-	3e+0	At2g28605	-	O.I.	C.G.	H.G.	Please select
58.8	100.0	0.4	Zm.14103.2.A1_at	CF005933	-	-	8e-5	At3g43740	leucine-rich repeat family protein	O.I.	C.G.	H.G.	Please select
58.8	100.0	0.2	Zm.13135.1.S1_at	CA404788	-	-	4e-5	At5g45550	mob1/phocein family protein	O.I.	C.G.	H.G.	Please select
58.5	100.0	0.4	ZmAffx.899.1.A1_at	AI770892	-	-	8e-1	At5g40981	unknown protein	O.I.	C.G.	H.G.	Please select
58.2	100.0	0.4	Zm.2175.1.S1_at	AW288761	hypothetical protein LOC100278437	-	7e-1	At2g35470	unknown protein	O.I.	C.G.	H.G.	Please select
58.1	100.0	0.3	Zm.15507.1.A1_at	CA405254	-	-	1e+0	At4g38170	FRS9 (FAR1-related sequence 9)	O.I.	C.G.	H.G.	Please select
57.8	100.0	1.6	ZmAffx.1118.2.S1_at	AW267189	-	-	8e-1	At2g27360	lipase, putative	O.I.	C.G.	H.G.	Please select
57.5	100.0	0.3	Zm.18064.1.A1_at	CK347702	-	-	1e+0	At1g66145	CLE18 (CLAVATA3/ESR-RELATED 18)	O.I.	C.G.	H.G.	Please select
57.3	100.0	0.1	Zm.557.1.A1_at	AF244697.1	glutathione S-transferase GST 32	-	3e-2	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	O.I.	C.G.	H.G.	Please select
57.1	100.0	0.5	ZmAffx.816.1.A1_at	AI770437	-	-	3e+0	At3g12977	DNA binding	O.I.	C.G.	H.G.	Please select
56.7	100.0	0.2	Zm.757.1.S1_at	BG349429	-	-	3e+0	At4g09070	-	O.I.	C.G.	H.G.	Please select
55.9	100.0	0.6	Zm.11191.1.A1_at	BM339959	-	-	6e-7	At1g15520	PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)	O.I.	C.G.	H.G.	Please select
55.9	100.0	0.5	Zm.3186.1.A1_at	CK827152	-	-	4e-4	At5g16070	chaperonin, putative	O.I.	C.G.	H.G.	Please select
55.8	100.0	8.5	RPTR-Zm-M15077-1_at	RPTR-Zm-M15077-1	-	-	0			O.I.	C.G.	H.G.	Please select
55.3	100.0	0.8	Zm.9114.1.A1_at	BM335298	-	-	1e+0	At2g47110	UBQ6	O.I.	C.G.	H.G.	Please select
55.1	100.0	1.1	ZmAffx.37.1.S1_at	AI657467	-	-	5e+0	At3g21338	unknown protein	O.I.	C.G.	H.G.	Please select
54.4	100.0	2.1	Zm.9868.1.A1_at	BM332331	-	-	9e-2	At3g32160	unknown protein	O.I.	C.G.	H.G.	Please select
54.3	100.0	1.2	Zm.6304.1.A1_a_at	AI714476	dnaJ domain containing protein	-	3e-1	At1g28160	ethylene-responsive element-binding family protein	O.I.	C.G.	H.G.	Please select
54.3	100.0	0.9	Zm.5851.12.A1_at	BI644197	hypothetical protein LOC100275208	-	2e+0	At3g49460	60S acidic ribosomal protein-related	O.I.	C.G.	H.G.	Please select
54.2	100.0	1.2	Zm.3264.1.A1_at	AW573379	hypothetical protein LOC100274973	-	3e+0	At5g56090	COX15 (cytochrome c oxidase 15)	O.I.	C.G.	H.G.	Please select
53.9	100.0	5.9	Zm.5466.3.A1_at	AI665910	hypothetical protein LOC100276605	-	9e-2	At1g20450	ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10)	O.I.	C.G.	H.G.	Please select
53.6	100.0	0.4	ZmAffx.1102.1.S1_at	AW181177	-	-	8e-1	At4g33560	unknown protein	O.I.	C.G.	H.G.	Please select
53.6	100.0	0.1	Zm.1409.2.S1_at	BQ486262	pectinesterase inhibitor domain containing protein	-	2e+0	At3g28455	CLE25 (CLAVATA3/ESR-RELATED 25)	O.I.	C.G.	H.G.	Please select
53.5	100.0	2.1	Zm.11379.1.A1_at	CB351163	-	-	5e+0	At2g29995	unknown protein	O.I.	C.G.	H.G.	Please select
53.5	100.0	0.3	Zm.869.2.S1_at	AI711751	Hypothetical protein LOC100192365	-	6e+0	At5g15560	unknown protein	O.I.	C.G.	H.G.	Please select
53.4	100.0	4.4	ZmAffx.149.1.S1_at	AI667835	-	-	3e+0	At3g10140	RECA3 (recA homolog 3)	O.I.	C.G.	H.G.	Please select
53.3	100.0	0.3	Zm.658.2.A1_at	AY109666.1	dihydroflavanoid reductase-like1	-	2e+0	At5g26630	MADS-box protein (AGL35)	O.I.	C.G.	H.G.	Please select
53.1	100.0	9.0	Zm.12235.1.S1_at	CF972364	-	-	7e+0	At5g62980	dihydroneopterin aldolase, putative	O.I.	C.G.	H.G.	Please select
53.1	100.0	0.5	Zm.16892.2.A1_at	CA403833	-	-	3e-6	At3g09710	IQD1 (IQ-DOMAIN 1)	O.I.	C.G.	H.G.	Please select
52.8	100.0	0.6	Zm.5787.2.A1_at	AY107157.1	-	-	4e-1	At5g48790	unknown protein	O.I.	C.G.	H.G.	Please select
52.5	100.0	6.6	Zm.18770.1.S1_at	CO525135	hypothetical protein LOC100280239	-	4e-1	At2g33220	-	O.I.	C.G.	H.G.	Please select
52.4	100.0	0.2	ZmAffx.1090.1.A1_at	AW065404	-	-	1e+1	At3g57958	unknown protein	O.I.	C.G.	H.G.	Please select
52.3	100.0	0.2	ZmAffx.725.1.S1_at	AI739939	-	-	7e+0	At5g35900	LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35)	O.I.	C.G.	H.G.	Please select
52.2	100.0	0.0	Zm.9329.1.A1_at	BM351235	-	-	5e+0	At5g59870	HTA6	O.I.	C.G.	H.G.	Please select
51.9	100.0	0.3	Zm.15629.1.S1_at	CD441270	-	-	9e-4	At3g04590	DNA-binding family protein	O.I.	C.G.	H.G.	Please select
51.8	100.0	0.4	Zm.2041.2.A1_at	H35882	Hypothetical protein LOC100191381	-	3e+0	At5g37870	seven in absentia (SINA) family protein	O.I.	C.G.	H.G.	Please select
51.7	100.0	0.7	Zm.5288.1.S1_at	CA828006	-	-	2e+0	At1g11980	RUB3 (UBIQUITIN-RELATED PROTEIN 3)	O.I.	C.G.	H.G.	Please select
51.6	100.0	0.2	Zm.12031.1.A1_at	BM382777	-	-	2e+1	At5g05650	-	O.I.	C.G.	H.G.	Please select
51.2	100.0	11.3	Zm.8708.1.S1_at	BQ577521	-	-	2e+1	At4g01150	unknown protein	O.I.	C.G.	H.G.	Please select
51.2	100.0	0.2	Zm.130.1.S1_at	AB014475.1	root cap-specific glycine-rich protein	-	4e-1	At1g61750	-	O.I.	C.G.	H.G.	Please select
51.1	100.0	1.3	Zm.5851.8.A1_x_at	X85334.1	MADS box protein	-	1e-7	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
51.0	100.0	0.8	Zm.10426.2.A1_at	AI668524	-	-	3e+0	At2g40610	ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)	O.I.	C.G.	H.G.	Please select
51.0	100.0	0.1	ZmAffx.840.1.A1_at	AI770592	-	-	2e-1	At1g36940	unknown protein	O.I.	C.G.	H.G.	Please select
50.8	100.0	1.4	Zm.4767.1.A1_at	AI739901	glutamyl-tRNA synthetase, cytoplasmic	-	3e+0	At3g50900	unknown protein	O.I.	C.G.	H.G.	Please select

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