Microarray experiments to specifically-expressed genes

GSM ID	GSM320445
Assay name	protocol: mRNA - genotype: CML69 maize inbred - rep2
GSE experiment	GSE12770: Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
167.0	100.0	27.5	Zm.10085.1.A1_at	BM382598	-	-	6e+0	At4g02270	pollen Ole e 1 allergen and extensin family protein	O.I.	C.G.	H.G.	Please select
72.0	100.0	13.0	Zm.15280.1.A1_s_at	BM351351	pathogenesis related protein-1	-	4e+0	At2g32310	-	O.I.	C.G.	H.G.	Please select
71.3	100.0	10.8	Zm.7909.1.A1_at	BM080388	hypothetical protein LOC100273458	-	3e-1	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	O.I.	C.G.	H.G.	Please select
60.0	100.0	3.0	Zm.18291.1.A1_at	BG319798	-	-	1e-1	At2g05510	glycine-rich protein	O.I.	C.G.	H.G.	Please select
59.7	100.0	12.5	Zm.9252.1.A1_at	BM267610	hypothetical protein LOC100217285	-	2e+1	At4g08290	nodulin MtN21 family protein	O.I.	C.G.	H.G.	Please select
53.1	100.0	1.8	Zm.11817.1.A1_at	BM380974	-	-	4e+0	At4g13150	unknown protein	O.I.	C.G.	H.G.	Please select
53.0	100.0	7.4	Zm.5574.1.A1_at	CF636602	-	-	2e+0	At1g01520	myb family transcription factor	O.I.	C.G.	H.G.	Please select
52.2	100.0	9.5	Zm.9764.1.A1_at	CO526069	-	-	8e-1	At5g19790	RAP2.11 (related to AP2 11)	O.I.	C.G.	H.G.	Please select
48.1	100.0	1.8	Zm.17633.1.A1_at	CK347448	tropinone reductase 2	-	7e+0	At2g15830	unknown protein	O.I.	C.G.	H.G.	Please select
38.5	99.9	0.8	Zm.8557.1.A1_at	BM336541	-	-	6e+0	At5g13120	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	O.I.	C.G.	H.G.	Please select
37.2	99.9	14.1	Zm.446.1.S1_at	AF529266.1	ent-kaurene synthase	-	3e-10	At1g79460	GA2 (GA REQUIRING 2)	O.I.	C.G.	H.G.	Please select
36.0	99.9	25.1	Zm.11530.2.A1_at	BM332875	-	-	1e+0	At3g27380	SDH2-1	O.I.	C.G.	H.G.	Please select
35.4	99.9	0.6	Zm.14903.1.A1_at	CF634216	Asparagine synthetase 4	-	1e-4	At3g47340	ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)	O.I.	C.G.	H.G.	Please select
35.3	99.9	2.3	Zm.14898.1.A1_x_at	BM351319	-	-	4e+0	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	O.I.	C.G.	H.G.	Please select
35.2	99.9	0.0	Zm.15280.2.A1_at	BM382215	-	-	9e+0	At5g19650	OFP8 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 8)	O.I.	C.G.	H.G.	Please select
34.9	99.9	0.8	Zm.2846.1.A1_at	BG842354	-	-	1e+1	At3g22570	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
34.8	99.9	4.1	Zm.14898.1.A1_at	BM351319	hypothetical protein LOC100193737	-	4e+0	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	O.I.	C.G.	H.G.	Please select
33.6	99.9	4.9	Zm.9943.1.A1_at	BI674800	cyclase	-	2e-1	At1g44542	cyclase family protein	O.I.	C.G.	H.G.	Please select
32.1	99.8	1.5	Zm.1556.1.A1_at	BM079935	-	-	1e-3	At1g51570	C2 domain-containing protein	O.I.	C.G.	H.G.	Please select
31.8	99.8	7.0	Zm.17659.1.A1_at	CF629386	acyl-CoA-binding protein	-	7e-17	At1g31812	ACBP6 (acyl-CoA-binding protein 6)	O.I.	C.G.	H.G.	Please select
31.3	99.8	3.2	Zm.10753.1.A1_at	BQ539394	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1	-	2e-2	At3g15890	protein kinase family protein	O.I.	C.G.	H.G.	Please select
31.3	99.8	0.6	Zm.8608.1.A1_at	BM334792	vascular plant one zinc finger protein	-	1e+0	At4g17730	SYP23 (SYNTAXIN OF PLANTS 23)	O.I.	C.G.	H.G.	Please select
31.2	99.8	0.1	Zm.1612.1.S1_at	AW787508	-	-	3e-1	At3g04530	PPCK2	O.I.	C.G.	H.G.	Please select
31.1	99.8	1.6	Zm.8714.1.A1_at	AY359573.1	acc oxidase	-	7e-10	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	O.I.	C.G.	H.G.	Please select
30.5	99.8	6.7	Zm.17291.1.A1_at	CF637748	Zn-dependent hydrolases, including glyoxylases	-	2e-5	At4g33540	metallo-beta-lactamase family protein	O.I.	C.G.	H.G.	Please select
30.0	99.8	4.6	Zm.10416.1.A1_at	BQ538140	glutathione S-transferase	-	2e+0	At1g11220	unknown protein	O.I.	C.G.	H.G.	Please select
29.2	99.8	8.8	Zm.8720.1.S1_at	AY303682.1	UDP-glucose-4-epimerase	-	9e-7	At4g23920	UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2)	O.I.	C.G.	H.G.	Please select
29.0	99.8	0.5	Zm.18103.1.S1_at	AY187878.1	nitrate transporter	-	3e-3	At1g59740	proton-dependent oligopeptide transport (POT) family protein	O.I.	C.G.	H.G.	Please select
28.8	99.7	3.5	Zm.737.2.A1_at	AI746142	-	-	4e-6	At5g60360	AALP (Arabidopsis aleurain-like protease)	O.I.	C.G.	H.G.	Please select
28.7	99.7	1.7	Zm.13343.1.S1_at	CA832209	Hypothetical protein LOC100192517	-	4e+1	At5g45880	pollen Ole e 1 allergen and extensin family protein	O.I.	C.G.	H.G.	Please select
27.1	99.7	1.5	Zm.8720.2.A1_a_at	BM267300	UDP-glucose-4-epimerase	-	5e+0	At5g16486	-	O.I.	C.G.	H.G.	Please select
26.8	99.7	2.2	Zm.7882.1.A1_at	CF637822	hypothetical protein LOC100277715	-	6e+0	At1g71330	ATNAP5	O.I.	C.G.	H.G.	Please select
26.7	99.7	5.8	Zm.655.1.A1_at	AF318580.1	Glk1 protein	-	1e-6	At5g44190	GLK2 (GOLDEN2-LIKE 2)	O.I.	C.G.	H.G.	Please select
26.5	99.7	3.0	Zm.14055.1.A1_at	AY107585.1	-	-	6e+0	At5g59340	WOX2 (WUSCHEL RELATED HOMEOBOX 2)	O.I.	C.G.	H.G.	Please select
26.5	99.7	1.2	Zm.1846.1.A1_at	CK348051	retrotransposon protein SINE subclass	-	9e-2	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	C.G.	H.G.	Please select
26.4	99.7	15.1	Zm.8868.1.A1_at	BM335939	hypothetical protein LOC100275200	-	2e+0	At3g05000	transport protein particle (TRAPP) component Bet3 family protein	O.I.	C.G.	H.G.	Please select
26.2	99.7	14.5	Zm.1338.1.S1_at	W49442	-	-	6e+0	At5g15350	plastocyanin-like domain-containing protein	O.I.	C.G.	H.G.	Please select
26.2	99.7	11.8	Zm.1504.1.S1_at	BF727955	hypothetical protein LOC100275840 /// hypothetical protein LOC100276628	-	4e-1	At2g36100	integral membrane family protein	O.I.	C.G.	H.G.	Please select
26.0	99.6	8.5	Zm.12164.1.A1_at	CO521714	hypothetical protein LOC100193480	-	1e-1	At5g60490	FLA12	O.I.	C.G.	H.G.	Please select
26.0	99.6	0.6	Zm.16448.1.A1_at	CF630687	-	-	7e-2	At1g76180	ERD14 (EARLY RESPONSE TO DEHYDRATION 14)	O.I.	C.G.	H.G.	Please select
25.7	99.6	6.5	Zm.11214.1.S1_at	AY107230.1	hypothetical protein LOC100273479	-	7e-4	At3g21770	peroxidase 30 (PER30) (P30) (PRXR9)	O.I.	C.G.	H.G.	Please select
25.6	99.6	1.4	Zm.1284.1.S1_at	BE344880	-	-	1e+1	At5g50760	auxin-responsive family protein	O.I.	C.G.	H.G.	Please select
25.3	99.6	14.6	Zm.11778.1.A1_at	BM380652	hypothetical protein LOC100274745	-	1e+0	At1g11920	pectate lyase family protein	O.I.	C.G.	H.G.	Please select
25.2	99.6	4.2	Zm.6692.1.S1_at	CA409229	hypothetical protein LOC100193785	-	3e-24	At3g24530	AAA-type ATPase family protein / ankyrin repeat family protein	O.I.	C.G.	H.G.	Please select
25.1	99.6	1.2	Zm.423.1.S1_at	AF019297.1	starch synthase isoform zSTSII-2	-	3e-7	At3g01180	AtSS2 (starch synthase 2)	O.I.	C.G.	H.G.	Please select
24.6	99.6	11.6	Zm.7352.1.A1_at	CK827464	-	-	2e-3	At2g01450	ATMPK17	O.I.	C.G.	H.G.	Please select
24.6	99.6	10.3	Zm.17712.1.S1_at	CK370052	hypothetical protein LOC100275406	-	8e-20	At5g19855	unknown protein	O.I.	C.G.	H.G.	Please select
24.6	99.6	5.8	Zm.10372.1.S1_at	AW433422	EF hand family protein	-	4e+0	At2g46390	unknown protein	O.I.	C.G.	H.G.	Please select
24.3	99.6	4.0	Zm.12021.1.A1_at	BM382722	hypothetical protein LOC100273474	-	4e+0	At5g10140	FLC (FLOWERING LOCUS C)	O.I.	C.G.	H.G.	Please select
23.6	99.5	6.2	Zm.10219.1.S1_at	CK368359	Hypothetical LOC542286	-	2e-10	At1g25155	anthranilate synthase beta subunit, putative	O.I.	C.G.	H.G.	Please select
23.5	99.5	1.6	Zm.131.1.A1_at	D83391.1	siroheme uroporphyrinogen methyltransferase1	-	1e-3	At5g40850	UPM1 (UROPHORPHYRIN METHYLASE 1)	O.I.	C.G.	H.G.	Please select
23.3	99.5	0.9	Zm.2248.1.A1_at	AW330703	-	-	7e-5	At1g32060	PRK (PHOSPHORIBULOKINASE)	O.I.	C.G.	H.G.	Please select
23.2	99.5	2.8	Zm.3444.1.A1_at	AI948251	-	-	4e+0	At5g07600	oleosin / glycine-rich protein	O.I.	C.G.	H.G.	Please select
22.7	99.5	1.3	Zm.14044.1.A1_at	CO520098	hypothetical protein LOC100275866	-	1e+0	At2g34120	unknown protein	O.I.	C.G.	H.G.	Please select
22.5	99.5	15.3	Zm.10293.1.S1_at	AY110737.1	light-inducible protein CPRF-2	-	6e-1	At3g50651	unknown protein	O.I.	C.G.	H.G.	Please select
22.5	99.5	3.4	Zm.17973.1.A1_at	AI812220	-	-	4e+0	At3g24540	protein kinase family protein	O.I.	C.G.	H.G.	Please select
22.2	99.4	4.4	Zm.8802.1.A1_at	BM075706	-	-	4e+0	At3g05590	RPL18 (RIBOSOMAL PROTEIN L18)	O.I.	C.G.	H.G.	Please select
22.2	99.4	1.3	Zm.11253.1.A1_at	AY107823.1	Hypothetical protein LOC100193102	-	1e+0	At5g17390	universal stress protein (USP) family protein	O.I.	C.G.	H.G.	Please select
22.1	99.4	2.2	Zm.11779.1.A1_at	CO527258	hypothetical protein LOC100217298	-	3e+0	At3g47800	aldose 1-epimerase family protein	O.I.	C.G.	H.G.	Please select
21.2	99.4	5.4	Zm.10156.1.A1_a_at	BM381823	major pollen allergen Car b 1 isoforms 1A and 1B	-	5e+0	At4g35480	RHA3B	O.I.	C.G.	H.G.	Please select
21.2	99.4	1.5	Zm.947.1.A1_at	BF733123	-	-	2e-2	At3g17180	scpl33 (serine carboxypeptidase-like 33)	O.I.	C.G.	H.G.	Please select
20.6	99.3	0.9	Zm.1803.1.A1_at	CK369047	-	-	6e-1	At5g42110	unknown protein	O.I.	C.G.	H.G.	Please select
20.3	99.3	1.2	Zm.11908.1.A1_at	BM381698	hypothetical protein LOC100276357	-	4e+0	At5g10310	unknown protein	O.I.	C.G.	H.G.	Please select
20.1	99.3	7.0	Zm.2276.1.S1_at	CO531514	thiol protease SEN102	-	3e+0	At1g61730	DNA-binding storekeeper protein-related	O.I.	C.G.	H.G.	Please select
20.0	99.3	1.0	Zm.798.1.S1_a_at	AY105548.1	hypothetical protein LOC100194211	-	2e-12	At4g37470	hydrolase, alpha/beta fold family protein	O.I.	C.G.	H.G.	Please select
19.9	99.3	14.4	Zm.884.1.A1_at	AF334143.1	phosphofructose kinase1	-	1e-69	At1g07110	F2KP (FRUCTOSE-2,6-BISPHOSPHATASE)	O.I.	C.G.	H.G.	Please select
19.8	99.3	2.1	Zm.14297.1.A1_at	AI737436	-	-	9e-3	At3g13340	WD-40 repeat family protein	O.I.	C.G.	H.G.	Please select
19.7	99.3	7.2	Zm.1519.1.S1_at	AF033263.1	blue-light receptor phototropin 1	-	5e-16	At3g45780	PHOT1 (PHOTOTROPIN 1)	O.I.	C.G.	H.G.	Please select
19.7	99.3	2.4	Zm.11669.1.A1_at	BM379831	hypothetical protein LOC100191662	-	7e-9	At3g01060	unknown protein	O.I.	C.G.	H.G.	Please select
19.6	99.3	2.7	Zm.13256.1.S1_at	AF058709.1	RNA polymerase sigma factor 2	-	3e-6	At1g64860	SIGA (SIGMA FACTOR A)	O.I.	C.G.	H.G.	Please select
19.6	99.3	0.2	Zm.559.1.A1_at	AF244699.1	glutathione S-transferase GST 34	-	3e-2	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.	Please select
19.5	99.3	1.4	Zm.7462.1.A1_at	BM078496	-	-	3e-1	At1g56010	NAC1	O.I.	C.G.	H.G.	Please select
19.5	99.3	0.8	Zm.13305.1.A1_at	CA827336	VQ motif family protein	-	1e+1	At5g64720	unknown protein	O.I.	C.G.	H.G.	Please select
19.2	99.3	12.7	Zm.1341.1.A1_at	BF729181	PAP fibrillin family protein	-	4e+0	At4g35390	AGF1 (AT-hook protein of GA feedback 1)	O.I.	C.G.	H.G.	Please select
19.2	99.3	11.4	Zm.4067.1.S1_at	AI834390	hypothetical protein LOC100275346	-	5e+0	At5g10480	PAS2 (PASTICCINO 2)	O.I.	C.G.	H.G.	Please select
19.2	99.3	9.7	Zm.10237.1.A1_at	BM333587	hypothetical protein LOC100277700	-	2e-2	At3g15630	unknown protein	O.I.	C.G.	H.G.	Please select
18.8	99.2	2.4	Zm.4248.1.A1_at	AY110118.1	hypothetical protein LOC100279222	-	6e-7	At5g53120	SPDS3 (SPERMIDINE SYNTHASE 3)	O.I.	C.G.	H.G.	Please select
18.7	99.2	19.9	Zm.3281.1.A1_at	BM268086	hypothetical protein LOC100276005	-	5e+0	At5g64170	dentin sialophosphoprotein-related	O.I.	C.G.	H.G.	Please select
18.6	99.2	30.5	Zm.1758.1.S1_at	CF031392	-	-	1e-4	At5g41430	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
18.6	99.2	2.4	Zm.18987.1.A1_at	CF631662	-	-	3e+0	At5g51120	PABN1 (POLYADENYLATE-BINDING PROTEIN 1)	O.I.	C.G.	H.G.	Please select
18.6	99.2	0.4	Zm.18249.1.A1_at	CN845019	-	-	2e+0	At5g19590	unknown protein	O.I.	C.G.	H.G.	Please select
18.3	99.2	7.5	Zm.1443.1.A1_at	BI358844	hypothetical protein LOC100276732	-	3e-1	At5g23260	TT16 (TRANSPARENT TESTA16)	O.I.	C.G.	H.G.	Please select
18.2	99.2	4.4	Zm.7361.1.A1_at	AY108454.1	hypothetical protein LOC100272701	-	6e-1	At5g54360	zinc finger (C2H2 type) family protein-related	O.I.	C.G.	H.G.	Please select
18.1	99.2	0.5	Zm.11741.1.S1_at	BM380376	-	-	1e+0	At1g66400	calmodulin-related protein, putative	O.I.	C.G.	H.G.	Please select
18.1	99.2	0.1	Zm.9384.1.A1_at	BM349149	-	-	6e+0	At4g28170	unknown protein	O.I.	C.G.	H.G.	Please select
17.9	99.2	3.2	Zm.13275.1.S1_at	CO520423	lethal leaf spot1	-	2e-23	At3g44880	ACD1 (ACCELERATED CELL DEATH 1)	O.I.	C.G.	H.G.	Please select
17.9	99.2	1.2	Zm.7913.1.A1_at	BM073220	hypothetical protein LOC100275409	-	2e+1	At5g63905	unknown protein	O.I.	C.G.	H.G.	Please select
17.7	99.1	15.5	Zm.5798.1.A1_at	BM072971	heat shock protein binding protein	-	2e-3	At3g13310	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	H.G.	Please select
17.7	99.1	1.9	ZmAffx.758.1.A1_at	AI746000	hypothetical protein LOC100273671	-	3e-3	At4g22260	IM (IMMUTANS)	O.I.	C.G.	H.G.	Please select
17.6	99.1	6.3	Zm.3396.1.S1_at	AY107588.1	mtN19-like protein	-	2e+1	At5g51830	pfkB-type carbohydrate kinase family protein	O.I.	C.G.	H.G.	Please select
17.6	99.1	0.6	Zm.10557.1.A1_x_at	CK347884	agmatine deiminase	-	6e-6	At5g08170	EMB1873 (EMBRYO DEFECTIVE 1873)	O.I.	C.G.	H.G.	Please select
17.4	99.1	3.3	Zm.12138.1.S1_at	CO517967	regulator of ribonuclease activity A	-	1e-4	At5g16450	dimethylmenaquinone methyltransferase family protein	O.I.	C.G.	H.G.	Please select
17.4	99.1	2.2	Zm.5003.2.A1_x_at	CO518270	-	-	9e-2	At4g25570	ACYB-2	O.I.	C.G.	H.G.	Please select
17.4	99.1	1.0	Zm.1444.2.A1_at	BE055973	-	-	8e-1	At5g10860	CBS domain-containing protein	O.I.	C.G.	H.G.	Please select
17.3	99.1	6.6	Zm.199.1.S1_s_at	AB008464.1	sucrose transporter1	-	2e-2	At1g22710	SUC2 (SUCROSE-PROTON SYMPORTER 2)	O.I.	C.G.	H.G.	Please select
17.3	99.1	0.5	Zm.3778.1.S1_at	AA979787	-	-	5e+0	At2g27180	unknown protein	O.I.	C.G.	H.G.	Please select
16.9	99.1	2.2	ZmAffx.196.1.A1_at	AI668462	hypothetical protein LOC100278421	-	5e-5	At3g15820	phosphatidic acid phosphatase-related / PAP2-related	O.I.	C.G.	H.G.	Please select
16.8	99.1	11.3	ZmAffx.371.1.A1_at	AI673886	hypothetical protein LOC100276677	-	8e-1	At4g22220	ISU1	O.I.	C.G.	H.G.	Please select
16.8	99.1	3.3	Zm.8879.1.A1_at	BM334135	nudix hydrolase 13	-	3e-9	At3g12600	atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)	O.I.	C.G.	H.G.	Please select
16.8	99.1	0.6	Zm.11896.1.A1_s_at	CO530711	SNF1-related protein kinase regulatory subunit beta-1	-	4e+0	At5g46940	invertase/pectin methylesterase inhibitor family protein	O.I.	C.G.	H.G.	Please select

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