Microarray experiments to specifically-expressed genes

GSM ID	GSM320444
Assay name	protocol: mRNA - genotype: CML69 maize inbred - rep1
GSE experiment	GSE12770: Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
63.3	100.0	1.4	Zm.8778.1.A1_at	BM075597	hypothetical protein LOC100191790	-	1e+0	At3g29152	-	O.I.	C.G.	H.G.	Please select
46.7	100.0	1.0	Zm.9457.1.A1_s_at	BM332847	-	-	6e+0	At5g54850	unknown protein	O.I.	C.G.	H.G.	Please select
43.1	99.9	2.9	Zm.8725.1.A1_at	BM075362	-	-	3e+1	At5g42630	ATS (ABERRANT TESTA SHAPE)	O.I.	C.G.	H.G.	Please select
42.1	99.9	4.4	Zm.3383.1.S1_at	CD998670	bifunctional coenzyme A synthase	-	5e-1	At1g32580	plastid developmental protein DAG, putative	O.I.	C.G.	H.G.	Please select
41.4	99.9	7.5	Zm.9764.1.A1_at	CO526069	-	-	8e-1	At5g19790	RAP2.11 (related to AP2 11)	O.I.	C.G.	H.G.	Please select
41.2	99.9	6.2	Zm.14137.2.S1_at	CA402353	hypothetical protein LOC100193311	-	2e-35	At1g77130	PGSIP2 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 2)	O.I.	C.G.	H.G.	Please select
40.0	99.9	0.9	Zm.2846.1.A1_at	BG842354	-	-	1e+1	At3g22570	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
39.8	99.9	4.6	Zm.9386.1.A1_at	BQ539064	hypothetical protein LOC100275351	-	2e-2	At3g49430	SRp34a (Ser/Arg-rich protein 34a)	O.I.	C.G.	H.G.	Please select
37.8	99.9	2.3	Zm.8784.1.A1_at	BM075617	hypothetical protein LOC100278555	-	1e+0	At1g49170	unknown protein	O.I.	C.G.	H.G.	Please select
36.2	99.9	1.7	Zm.1556.1.A1_at	BM079935	-	-	1e-3	At1g51570	C2 domain-containing protein	O.I.	C.G.	H.G.	Please select
33.3	99.9	16.8	Zm.10237.1.A1_at	BM333587	hypothetical protein LOC100277700	-	2e-2	At3g15630	unknown protein	O.I.	C.G.	H.G.	Please select
33.0	99.8	8.9	Zm.8639.1.A1_at	BM332170	-	-	2e+1	At5g58600	PMR5 (POWDERY MILDEW RESISTANT 5)	O.I.	C.G.	H.G.	Please select
32.2	99.8	7.1	Zm.17291.1.A1_at	CF637748	Zn-dependent hydrolases, including glyoxylases	-	2e-5	At4g33540	metallo-beta-lactamase family protein	O.I.	C.G.	H.G.	Please select
31.2	99.8	2.7	Zm.901.1.S1_at	AY109251.1	-	-	1e+0	At2g36026	-	O.I.	C.G.	H.G.	Please select
30.8	99.8	10.5	Zm.8552.1.A1_at	BM347529	hypothetical protein LOC100275365	-	1e+0	At1g35340	ATP-dependent protease La (LON) domain-containing protein	O.I.	C.G.	H.G.	Please select
30.7	99.8	0.8	Zm.17377.1.A1_at	CK144565	-	-	5e+0	At4g14810	unknown protein	O.I.	C.G.	H.G.	Please select
30.2	99.8	5.8	Zm.12138.1.S1_at	CO517967	regulator of ribonuclease activity A	-	1e-4	At5g16450	dimethylmenaquinone methyltransferase family protein	O.I.	C.G.	H.G.	Please select
30.1	99.8	4.6	Zm.17973.1.A1_at	AI812220	-	-	4e+0	At3g24540	protein kinase family protein	O.I.	C.G.	H.G.	Please select
29.1	99.8	3.4	Zm.14898.1.A1_at	BM351319	hypothetical protein LOC100193737	-	4e+0	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	O.I.	C.G.	H.G.	Please select
28.9	99.7	2.1	Zm.10417.1.S1_at	BI388862	hypothetical protein LOC100275074	-	2e+0	At3g20570	plastocyanin-like domain-containing protein	O.I.	C.G.	H.G.	Please select
28.9	99.7	1.9	Zm.14898.1.A1_x_at	BM351319	-	-	4e+0	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	O.I.	C.G.	H.G.	Please select
27.4	99.7	1.6	Zm.11908.1.A1_at	BM381698	hypothetical protein LOC100276357	-	4e+0	At5g10310	unknown protein	O.I.	C.G.	H.G.	Please select
25.8	99.6	7.7	Zm.8720.1.S1_at	AY303682.1	UDP-glucose-4-epimerase	-	9e-7	At4g23920	UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2)	O.I.	C.G.	H.G.	Please select
25.1	99.6	1.2	Zm.1846.1.A1_at	CK348051	retrotransposon protein SINE subclass	-	9e-2	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	C.G.	H.G.	Please select
24.7	99.6	0.2	Zm.6336.1.A1_at	AI691442	-	-	9e-2	At5g60490	FLA12	O.I.	C.G.	H.G.	Please select
24.5	99.6	2.7	Zm.17021.1.S1_at	CO530089	hypothetical protein LOC100272363	-	3e+0	At1g72450	JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)	O.I.	C.G.	H.G.	Please select
24.2	99.6	2.2	Zm.3906.1.A1_at	AY110110.1	-	-	3e-21	At3g05030	NHX2 (SODIUM HYDROGEN EXCHANGER 2)	O.I.	C.G.	H.G.	Please select
23.9	99.5	19.0	Zm.9342.1.A1_at	BM340304	-	-	6e-1	At2g25890	glycine-rich protein / oleosin	O.I.	C.G.	H.G.	Please select
23.3	99.5	38.7	Zm.704.1.S1_at	U15781.1	xyloglucan endotransglycosylase homolog1	-	3e-6	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	O.I.	C.G.	H.G.	Please select
23.3	99.5	28.3	Zm.3656.1.A1_at	AY106382.1	Wound responsive protein-like	-	2e-1	At1g75380	wound-responsive protein-related	O.I.	C.G.	H.G.	Please select
22.7	99.5	3.6	Zm.7685.1.A1_a_at	CK369531	hypothetical protein LOC100278578	-	2e+0	At3g28680	prolylcarboxypeptidase-related	O.I.	C.G.	H.G.	Please select
22.6	99.5	1.3	Zm.14044.1.A1_at	CO520098	hypothetical protein LOC100275866	-	1e+0	At2g34120	unknown protein	O.I.	C.G.	H.G.	Please select
22.6	99.5	1.2	Zm.1284.1.S1_at	BE344880	-	-	1e+1	At5g50760	auxin-responsive family protein	O.I.	C.G.	H.G.	Please select
22.6	99.5	0.6	Zm.9841.1.A1_at	BM340753	-	-	6e-3	At2g01340	unknown protein	O.I.	C.G.	H.G.	Please select
22.5	99.5	17.8	Zm.8578.2.A1_at	BM347528	hypothetical protein LOC100278807	-	8e+0	At3g06120	MUTE (MUTE)	O.I.	C.G.	H.G.	Please select
22.4	99.5	5.8	Zm.3026.1.A1_at	CF030452	NADPH HC toxin reductase-like protein	-	3e+0	At1g32690	unknown protein	O.I.	C.G.	H.G.	Please select
22.3	99.5	1.6	Zm.947.1.A1_at	BF733123	-	-	2e-2	At3g17180	scpl33 (serine carboxypeptidase-like 33)	O.I.	C.G.	H.G.	Please select
22.3	99.5	0.1	Zm.9236.1.A1_at	BM339258	-	-	8e-2	At3g01860	unknown protein	O.I.	C.G.	H.G.	Please select
21.9	99.4	37.4	Zm.9873.1.A1_at	AW330894	lichenase-2	-	8e+0	Atcg00420	-	O.I.	C.G.	H.G.	Please select
21.9	99.4	0.9	Zm.15845.1.S1_at	CF244242	hypothetical protein LOC100216966	-	5e+0	At3g10850	GLY2	O.I.	C.G.	H.G.	Please select
21.9	99.4	0.8	Zm.4017.2.S1_a_at	CD052379	ubiquitin-conjugating enzyme E2 I /// ubiquitin-conjugating enzyme E2 I	-	1e-19	At3g57870	SCE1 (SUMO CONJUGATION ENZYME 1)	O.I.	C.G.	H.G.	Please select
21.7	99.4	3.5	Zm.12021.1.A1_at	BM382722	hypothetical protein LOC100273474	-	4e+0	At5g10140	FLC (FLOWERING LOCUS C)	O.I.	C.G.	H.G.	Please select
21.7	99.4	0.8	Zm.2934.1.S1_at	CF033378	-	-	2e+0	At4g24973	-	O.I.	C.G.	H.G.	Please select
21.5	99.4	7.0	Zm.12164.1.A1_at	CO521714	hypothetical protein LOC100193480	-	1e-1	At5g60490	FLA12	O.I.	C.G.	H.G.	Please select
21.2	99.4	2.3	ZmAffx.758.1.A1_at	AI746000	hypothetical protein LOC100273671	-	3e-3	At4g22260	IM (IMMUTANS)	O.I.	C.G.	H.G.	Please select
21.1	99.4	0.3	Zm.4903.1.S1_at	AI782917	hypothetical protein LOC100273473	-	1e+0	At3g26085	CAAX amino terminal protease family protein	O.I.	C.G.	H.G.	Please select
20.8	99.4	13.8	Zm.16941.1.S1_at	AY105148.1	-	-	2e+1	At5g64310	AGP1 (ARABINOGALACTAN PROTEIN 1)	O.I.	C.G.	H.G.	Please select
20.8	99.4	0.1	Zm.1612.1.S1_at	AW787508	-	-	3e-1	At3g04530	PPCK2	O.I.	C.G.	H.G.	Please select
20.7	99.4	8.5	Zm.1443.1.A1_at	BI358844	hypothetical protein LOC100276732	-	3e-1	At5g23260	TT16 (TRANSPARENT TESTA16)	O.I.	C.G.	H.G.	Please select
20.7	99.4	0.8	Zm.2248.1.A1_at	AW330703	-	-	7e-5	At1g32060	PRK (PHOSPHORIBULOKINASE)	O.I.	C.G.	H.G.	Please select
20.4	99.3	1.1	Zm.7925.1.A1_at	BM080435	-	-	1e+0	At1g58070	unknown protein	O.I.	C.G.	H.G.	Please select
20.3	99.3	4.8	Zm.10372.1.S1_at	AW433422	EF hand family protein	-	4e+0	At2g46390	unknown protein	O.I.	C.G.	H.G.	Please select
20.2	99.3	14.6	Zm.884.1.A1_at	AF334143.1	phosphofructose kinase1	-	1e-69	At1g07110	F2KP (FRUCTOSE-2,6-BISPHOSPHATASE)	O.I.	C.G.	H.G.	Please select
20.2	99.3	6.9	Zm.17948.1.A1_at	CF630514	-	-	2e-2	At3g24570	peroxisomal membrane 22 kDa family protein	O.I.	C.G.	H.G.	Please select
20.0	99.3	1.1	Zm.8720.2.A1_a_at	BM267300	UDP-glucose-4-epimerase	-	5e+0	At5g16486	-	O.I.	C.G.	H.G.	Please select
19.9	99.3	0.3	Zm.12510.1.S1_at	AW056992	-	-	5e+0	At1g76955	Expressed protein	O.I.	C.G.	H.G.	Please select
19.7	99.3	1.2	Zm.1444.2.A1_at	BE055973	-	-	8e-1	At5g10860	CBS domain-containing protein	O.I.	C.G.	H.G.	Please select
19.6	99.3	0.6	Zm.10557.1.A1_x_at	CK347884	agmatine deiminase	-	6e-6	At5g08170	EMB1873 (EMBRYO DEFECTIVE 1873)	O.I.	C.G.	H.G.	Please select
19.3	99.3	13.1	Zm.10293.1.S1_at	AY110737.1	light-inducible protein CPRF-2	-	6e-1	At3g50651	unknown protein	O.I.	C.G.	H.G.	Please select
19.0	99.2	20.8	Zm.8671.1.A1_at	CO525023	hypothetical protein LOC100272947	-	1e+0	At1g70830	MLP28 (MLP-LIKE PROTEIN 28)	O.I.	C.G.	H.G.	Please select
19.0	99.2	5.1	Zm.12946.1.S1_at	CF023069	zein protein-body ER membrane protein	-	8e-1	At4g00870	basic helix-loop-helix (bHLH) family protein	O.I.	C.G.	H.G.	Please select
19.0	99.2	2.6	Zm.13256.1.S1_at	AF058709.1	RNA polymerase sigma factor 2	-	3e-6	At1g64860	SIGA (SIGMA FACTOR A)	O.I.	C.G.	H.G.	Please select
18.9	99.2	3.6	Zm.8897.1.S1_at	BM079371	hypothetical protein LOC100193770	-	3e-3	At1g76470	3-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductase	O.I.	C.G.	H.G.	Please select
18.8	99.2	2.4	ZmAffx.196.1.A1_at	AI668462	hypothetical protein LOC100278421	-	5e-5	At3g15820	phosphatidic acid phosphatase-related / PAP2-related	O.I.	C.G.	H.G.	Please select
18.6	99.2	2.1	Zm.7685.1.A1_x_at	CK369531	hypothetical protein LOC100278578	-	2e+0	At3g28680	prolylcarboxypeptidase-related	O.I.	C.G.	H.G.	Please select
18.4	99.2	4.6	Zm.3087.1.A1_at	BF728549	CREG1 protein	-	2e+0	At4g09260	unknown protein	O.I.	C.G.	H.G.	Please select
18.4	99.2	1.2	Zm.7685.1.A1_at	CK369531	hypothetical protein LOC100278578	-	2e+0	At3g28680	prolylcarboxypeptidase-related	O.I.	C.G.	H.G.	Please select
18.3	99.2	20.0	Zm.3027.1.A1_at	AY107517.1	hypothetical protein LOC100192895	-	1e-6	At3g10970	haloacid dehalogenase-like hydrolase family protein	O.I.	C.G.	H.G.	Please select
18.1	99.2	3.6	Zm.8802.1.A1_at	BM075706	-	-	4e+0	At3g05590	RPL18 (RIBOSOMAL PROTEIN L18)	O.I.	C.G.	H.G.	Please select
18.0	99.2	6.4	Zm.3396.1.S1_at	AY107588.1	mtN19-like protein	-	2e+1	At5g51830	pfkB-type carbohydrate kinase family protein	O.I.	C.G.	H.G.	Please select
17.7	99.1	8.9	Zm.2269.1.S1_at	CF631922	-	-	1e-7	At5g51820	PGM (PHOSPHOGLUCOMUTASE)	O.I.	C.G.	H.G.	Please select
17.6	99.1	1.3	Zm.17973.1.A1_s_at	AI812220	-	-	4e+0	At3g24540	protein kinase family protein	O.I.	C.G.	H.G.	Please select
17.5	99.1	0.9	Zm.898.1.A1_a_at	BM337541	-	-	1e+0	At3g02730	TRXF1 (THIOREDOXIN F-TYPE 1)	O.I.	C.G.	H.G.	Please select
17.3	99.1	7.4	Zm.11723.1.A1_at	BM380214	hypothetical protein LOC100275364	-	5e+0	At5g37200	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
17.1	99.1	2.1	Zm.5003.2.A1_x_at	CO518270	-	-	9e-2	At4g25570	ACYB-2	O.I.	C.G.	H.G.	Please select
17.1	99.1	0.6	Zm.1566.1.A1_at	CF031520	-	-	8e-1	At1g75220	integral membrane protein, putative	O.I.	C.G.	H.G.	Please select
17.0	99.1	6.0	Zm.2276.1.S1_at	CO531514	thiol protease SEN102	-	3e+0	At1g61730	DNA-binding storekeeper protein-related	O.I.	C.G.	H.G.	Please select
17.0	99.1	4.7	Zm.3927.1.A1_at	BM350041	hypothetical protein LOC100193737	-	1e-8	At2g26670	TED4 (REVERSAL OF THE DET PHENOTYPE 4)	O.I.	C.G.	H.G.	Please select
17.0	99.1	4.3	Zm.16286.1.A1_at	CO520397	-	-	5e-10	At2g23390	-	O.I.	C.G.	H.G.	Please select
16.9	99.1	0.7	Zm.657.1.S1_s_at	AF365951.1	early light-inducible protein ELIP	-	3e-5	At4g14690	ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)	O.I.	C.G.	H.G.	Please select
16.8	99.1	2.8	Zm.6692.1.S1_at	CA409229	hypothetical protein LOC100193785	-	3e-24	At3g24530	AAA-type ATPase family protein / ankyrin repeat family protein	O.I.	C.G.	H.G.	Please select
16.6	99.1	6.1	Zm.1519.1.S1_at	AF033263.1	blue-light receptor phototropin 1	-	5e-16	At3g45780	PHOT1 (PHOTOTROPIN 1)	O.I.	C.G.	H.G.	Please select
16.6	99.1	5.8	Zm.12285.1.A1_at	AY104534.1	hypothetical protein LOC100192782	-	2e+0	At5g15970	KIN2	O.I.	C.G.	H.G.	Please select
16.3	99.0	0.3	Zm.8608.1.A1_at	BM334792	vascular plant one zinc finger protein	-	1e+0	At4g17730	SYP23 (SYNTAXIN OF PLANTS 23)	O.I.	C.G.	H.G.	Please select
16.3	99.0	0.2	Zm.2485.1.A1_at	BG841709	hypothetical protein LOC100194257	-	5e+0	At4g05494	unknown protein	O.I.	C.G.	H.G.	Please select

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