CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM318625

Assay name Apex_octa_18DAS_2

GSE experiment GSE12691: Knockdown and overexpression of CIN-TCP genes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
71.3 99.9 56.5 At5g64110 836532 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:membrane;PFOB O.I. C.G. H.G.
54.3 99.8 260.7 At5g36910 833659 THI2.2 (THIONIN 2.2) Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. O.I. C.G. H.G.
47.2 99.8 19.2 At5g60780 836199 ATNRT2.3 member of High affinity nitrate transporter family O.I. C.G. H.G.
42.4 99.8 19.1 At3g09600 820117 myb family transcription factor F:transcription factor activity, DNA binding;P:in 9 processes;C:chloroplast;PMOF O.I. C.G. H.G.
41.0 99.8 44.6 At4g38960 830051 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POM O.I. C.G. H.G.
39.4 99.8 56.1 At4g02850 828160 phenazine biosynthesis PhzC/PhzF family protein F:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPA O.I. C.G. H.G.
36.2 99.7 164.0 At3g54500 824615 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB O.I. C.G. H.G.
35.8 99.7 19.7 At1g31310 840019 hydroxyproline-rich glycoprotein family protein F:transcription factor activity;P:regulation of transcription;C:unknown;MPOBFVA O.I. C.G. H.G.
32.6 99.7 22.9 At1g49730 841396 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
32.4 99.7 35.6 At2g29890 817539 VLN1 (VILLIN-LIKE 1) Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization. O.I. C.G. H.G.
32.4 99.7 16.3 At1g11300 837672 ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
31.9 99.7 25.9 At3g63300 825505 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:unknown;OMPBF O.I. C.G. H.G.
30.7 99.7 42.9 At1g11600 837704 CYP77B1 member of CYP77B O.I. C.G. H.G.
27.3 99.7 13.9 At3g27920 822415 ATMYB0 (MYB DOMAIN PROTEIN 0) Encodes a Myb-like protein that is required for induction of trichome development. O.I. C.G. H.G.
27.1 99.7 22.5 At1g72410 843573 COP1-interacting protein-related F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOFBPVA O.I. C.G. H.G.
26.6 99.7 35.8 At3g55020 824668 RabGAP/TBC domain-containing protein F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:cytosol;MOFBPVA O.I. C.G. H.G.
26.5 99.7 35.0 At1g29270 839801 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
26.4 99.7 45.9 At3g18960 821429 transcriptional factor B3 family protein F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
26.0 99.7 12.4 At1g50970 841519 membrane trafficking VPS53 family protein F:transporter activity;P:transport;C:endomembrane system;MFOPBA O.I. C.G. H.G.
25.8 99.7 17.9 At1g66730 842991 ATP dependent DNA ligase family protein F:DNA binding, DNA ligase (ATP) activity, ATP binding;P:DNA repair, DNA replication, DNA recombination;C:chloroplast;BOMFAVP O.I. C.G. H.G.
23.8 99.6 31.7 At3g26932 822310 DRB3 (dsRNA-binding protein 3) F:double-stranded RNA binding, RNA binding;P:biological_process unknown;C:intracellular;BPMOV O.I. C.G. H.G.
22.6 99.6 40.5 At2g35920 818165 helicase domain-containing protein F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;MBOFPV O.I. C.G. H.G.
22.4 99.6 46.0 At4g33000 829437 CBL10 (CALCINEURIN B-LIKE 10) Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. O.I. C.G. H.G.
22.4 99.6 27.5 At5g07180 830609 ERL2 (ERECTA-LIKE 2) Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments. O.I. C.G. H.G.
22.4 99.6 12.5 At3g25670 822155 leucine-rich repeat family protein F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA O.I. C.G. H.G.
22.0 99.6 31.4 At1g06100 837119 fatty acid desaturase family protein F:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPV O.I. C.G. H.G.
21.8 99.6 127.2 At4g38660 830022 thaumatin, putative F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOV O.I. C.G. H.G.
21.8 99.6 33.8 At5g07690 830662 ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29) Encodes a putative transcription factor (MYB29). O.I. C.G. H.G.
21.6 99.6 28.2 At4g00480 827965 myc-related transcription factor (MYC1) MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus O.I. C.G. H.G.
21.5 99.6 44.9 At4g00180 827914 YAB3 (YABBY3) YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades. O.I. C.G. H.G.
21.3 99.6 57.4 At3g11600 820333 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
21.1 99.6 199.2 At1g01060 839341 LHY (LATE ELONGATED HYPOCOTYL) LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 O.I. C.G. H.G.
21.1 99.6 6.0 At1g31040 839990 unknown protein F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
20.9 99.6 71.8 At2g45190 819127 AFO (ABNORMAL FLORAL ORGANS) Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS). O.I. C.G. H.G.
20.5 99.6 13.2 At4g03205 828029 coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative F:coproporphyrinogen oxidase activity;P:porphyrin biosynthetic process;C:chloroplast;OBFMP O.I. C.G. H.G.
20.4 99.6 16.6 At1g55200 841963 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
20.4 99.6 6.9 At1g75430 843879 BLH11 (BEL1-LIKE HOMEODOMAIN 11) F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
20.1 99.6 62.8 At4g34160 829564 CYCD3 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. O.I. C.G. H.G.
19.5 99.6 94.3 At5g10180 830882 AST68 Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation. O.I. C.G. H.G.
19.4 99.6 64.8 At4g15620 827239 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
19.4 99.6 58.8 At1g66760 842994 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA O.I. C.G. H.G.
19.1 99.6 13.9 At3g02500 821065 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
18.8 99.5 14.6 At2g31150 817671 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding;P:ATP biosynthetic process;C:membrane;OMBFPVA O.I. C.G. H.G.
18.4 99.5 129.9 At5g67260 836861 CYCD3 Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. O.I. C.G. H.G.
18.4 99.5 36.5 At4g32980 829435 ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM. O.I. C.G. H.G.
18.4 99.5 32.4 At1g05230 839256 HDG2 (HOMEODOMAIN GLABROUS 2) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. O.I. C.G. H.G.
18.4 99.5 9.0 At1g68480 843177 JAG (JAGGED) Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development. O.I. C.G. H.G.
18.2 99.5 50.4 At4g04850 825822 KEA3 member of Putative potassium transporter family O.I. C.G. H.G.
18.0 99.5 23.8 At4g32710 3770575 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
17.7 99.5 100.5 At2g46830 819296 CCA1 (CIRCADIAN CLOCK ASSOCIATED 1) Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. O.I. C.G. H.G.
17.5 99.5 44.4 At2g34710 818036 PHB (PHABULOSA) Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA. O.I. C.G. H.G.
17.5 99.5 10.6 At5g24750 832544 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BFPOVM O.I. C.G. H.G.
17.2 99.5 77.9 At4g37750 829931 ANT (AINTEGUMENTA) ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia. O.I. C.G. H.G.
17.2 99.5 24.5 At5g41070 834109 DRB5 (DSRNA-BINDING PROTEIN 5) Encodes a double-stranded RNA binding protein. O.I. C.G. H.G.
16.9 99.5 18.6 At3g10010 820162 DML2 (DEMETER-LIKE 2) Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks. O.I. C.G. H.G.
16.7 99.5 214.2 At4g22490 828344 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
16.4 99.5 54.9 At1g35612 3766952 transposable element gene pseudogene of Ulp1 protease family protein O.I. C.G. H.G.
16.3 99.5 27.6 At2g36400 818213 AtGRF3 (GROWTH-REGULATING FACTOR 3) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower. O.I. C.G. H.G.
16.2 99.5 26.7 At5g22700 832333 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
16.1 99.5 93.2 At3g61310 825303 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
16.0 99.5 139.7 At5g54510 835539 DFL1 (DWARF IN LIGHT 1) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). O.I. C.G. H.G.
16.0 99.5 81.6 At5g28640 832968 AN3 (ANGUSTIFOLIA 3) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors. O.I. C.G. H.G.
15.5 99.5 26.8 At2g36810 818253 binding F:binding;P:biological_process unknown;C:chloroplast;MPO O.I. C.G. H.G.
15.3 99.4 98.3 At3g02380 821298 COL2 (constans-like 2) homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins O.I. C.G. H.G.
15.3 99.4 32.5 At3g57470 824914 peptidase M16 family protein / insulinase family protein F:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
15.3 99.4 29.3 At4g14720 827125 PPD2 PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. O.I. C.G. H.G.
15.3 99.4 8.3 At5g56490 835750 FAD-binding domain-containing protein F:oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BOFPMA O.I. C.G. H.G.
15.2 99.4 82.8 At5g23940 832459 EMB3009 (embryo defective 3009) F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBO O.I. C.G. H.G.
15.2 99.4 25.6 At5g27360 832795 SFP2 Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence. O.I. C.G. H.G.
15.2 99.4 23.6 At3g13000 820486 transcription factor F:transcription factor activity;P:regulation of transcription;C:vacuole;PBOMF O.I. C.G. H.G.
15.1 99.4 139.8 At2g26330 817173 ER (ERECTA) Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. O.I. C.G. H.G.
15.1 99.4 41.9 At1g19680 838555 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;OPMBF O.I. C.G. H.G.
15.0 99.4 126.6 At3g02110 821207 scpl25 (serine carboxypeptidase-like 25) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB O.I. C.G. H.G.
14.7 99.4 102.8 At4g37550 829910 formamidase, putative / formamide amidohydrolase, putative F:formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;P:metabolic process;C:vacuole;BOFAP O.I. C.G. H.G.
14.7 99.4 15.9 At1g79420 844280 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
14.6 99.4 44.8 At5g48360 834889 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBA O.I. C.G. H.G.
14.5 99.4 30.8 At2g45850 819193 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:nucleus;PMFOB O.I. C.G. H.G.
14.4 99.4 83.3 At4g21750 828263 ATML1 (MERISTEM LAYER 1) Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development. O.I. C.G. H.G.
14.4 99.4 56.1 At3g55130 824679 ATWBC19 (White-Brown Complex homolog 19) Encodes a vacuole localized protein of the ABC transporter White-Brown Complex (WBC) family. When overexpressed in planta, confers resistance to kanamycin. O.I. C.G. H.G.
14.4 99.4 19.3 At3g46490 823802 iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:secondary metabolic process;C:cellular_component unknown;POBFM O.I. C.G. H.G.
14.4 99.4 17.5 At5g46880 834733 HB-7 (HOMEOBOX-7) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOB O.I. C.G. H.G.
14.3 99.4 40.8 At1g60160 842311 potassium transporter family protein F:potassium ion transmembrane transporter activity;P:potassium ion transport;C:chloroplast;BPOFAV O.I. C.G. H.G.
14.3 99.4 9.4 At3g26920 822308 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF O.I. C.G. H.G.
14.2 99.4 22.0 At1g60270 3767579 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
14.1 99.4 116.0 At2g33850 817954 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAV O.I. C.G. H.G.
14.1 99.4 86.3 At2g41250 818724 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity;P:metabolic process;C:mitochondrion;BOMAPF O.I. C.G. H.G.
14.1 99.4 47.4 At5g24620 832533 thaumatin-like protein, putative F:unknown;P:response to other organism;C:endomembrane system;MPOFBVA O.I. C.G. H.G.
14.1 99.4 32.6 At5g18460 831964 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB O.I. C.G. H.G.
14.1 99.4 13.7 At4g09160 826497 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein F:transporter activity;P:transport;C:chloroplast;MOFBPVA O.I. C.G. H.G.
14.0 99.4 17.0 At4g10910 826689 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
14.0 99.4 14.4 At5g47380 834785 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBO O.I. C.G. H.G.
13.9 99.4 64.9 At1g14410 838003 WHY1 (WHIRLY 1) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length. O.I. C.G. H.G.
13.9 99.4 18.4 At5g66940 836828 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO O.I. C.G. H.G.
13.8 99.4 90.3 At1g66430 842961 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:chloroplast, chloroplast stroma;BOPAMF O.I. C.G. H.G.
13.7 99.4 11.2 At4g36270 829784 ATP binding F:ATP binding;P:biological_process unknown;C:cellular_component unknown;MPOB O.I. C.G. H.G.
13.7 99.4 8.8 At5g11320 831003 YUC4 (YUCCA4) Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development. O.I. C.G. H.G.
13.5 99.4 42.8 At4g36980 829852 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPVB O.I. C.G. H.G.
13.5 99.4 27.2 At4g00820 828002 iqd17 (IQ-domain 17) F:calmodulin binding;P:biological_process unknown;C:unknown;POMFVB O.I. C.G. H.G.
13.5 99.4 21.4 At5g38140 833794 NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFO O.I. C.G. H.G.
13.4 99.4 24.3 At3g57780 824947 - F:unknown;P:unknown;C:unknown;OMFBPVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
71.3	99.9	56.5	At5g64110	836532	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:membrane;PFOB	O.I.	C.G.	H.G.
54.3	99.8	260.7	At5g36910	833659	THI2.2 (THIONIN 2.2)	Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.	O.I.	C.G.	H.G.
47.2	99.8	19.2	At5g60780	836199	ATNRT2.3	member of High affinity nitrate transporter family	O.I.	C.G.	H.G.
42.4	99.8	19.1	At3g09600	820117	myb family transcription factor	F:transcription factor activity, DNA binding;P:in 9 processes;C:chloroplast;PMOF	O.I.	C.G.	H.G.
41.0	99.8	44.6	At4g38960	830051	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POM	O.I.	C.G.	H.G.
39.4	99.8	56.1	At4g02850	828160	phenazine biosynthesis PhzC/PhzF family protein	F:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPA	O.I.	C.G.	H.G.
36.2	99.7	164.0	At3g54500	824615	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB	O.I.	C.G.	H.G.
35.8	99.7	19.7	At1g31310	840019	hydroxyproline-rich glycoprotein family protein	F:transcription factor activity;P:regulation of transcription;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
32.6	99.7	22.9	At1g49730	841396	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
32.4	99.7	35.6	At2g29890	817539	VLN1 (VILLIN-LIKE 1)	Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization.	O.I.	C.G.	H.G.
32.4	99.7	16.3	At1g11300	837672	ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding	F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
31.9	99.7	25.9	At3g63300	825505	phosphoinositide binding	F:phosphoinositide binding;P:signal transduction;C:unknown;OMPBF	O.I.	C.G.	H.G.
30.7	99.7	42.9	At1g11600	837704	CYP77B1	member of CYP77B	O.I.	C.G.	H.G.
27.3	99.7	13.9	At3g27920	822415	ATMYB0 (MYB DOMAIN PROTEIN 0)	Encodes a Myb-like protein that is required for induction of trichome development.	O.I.	C.G.	H.G.
27.1	99.7	22.5	At1g72410	843573	COP1-interacting protein-related	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOFBPVA	O.I.	C.G.	H.G.
26.6	99.7	35.8	At3g55020	824668	RabGAP/TBC domain-containing protein	F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:cytosol;MOFBPVA	O.I.	C.G.	H.G.
26.5	99.7	35.0	At1g29270	839801	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
26.4	99.7	45.9	At3g18960	821429	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
26.0	99.7	12.4	At1g50970	841519	membrane trafficking VPS53 family protein	F:transporter activity;P:transport;C:endomembrane system;MFOPBA	O.I.	C.G.	H.G.
25.8	99.7	17.9	At1g66730	842991	ATP dependent DNA ligase family protein	F:DNA binding, DNA ligase (ATP) activity, ATP binding;P:DNA repair, DNA replication, DNA recombination;C:chloroplast;BOMFAVP	O.I.	C.G.	H.G.
23.8	99.6	31.7	At3g26932	822310	DRB3 (dsRNA-binding protein 3)	F:double-stranded RNA binding, RNA binding;P:biological_process unknown;C:intracellular;BPMOV	O.I.	C.G.	H.G.
22.6	99.6	40.5	At2g35920	818165	helicase domain-containing protein	F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;MBOFPV	O.I.	C.G.	H.G.
22.4	99.6	46.0	At4g33000	829437	CBL10 (CALCINEURIN B-LIKE 10)	Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis.	O.I.	C.G.	H.G.
22.4	99.6	27.5	At5g07180	830609	ERL2 (ERECTA-LIKE 2)	Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.	O.I.	C.G.	H.G.
22.4	99.6	12.5	At3g25670	822155	leucine-rich repeat family protein	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA	O.I.	C.G.	H.G.
22.0	99.6	31.4	At1g06100	837119	fatty acid desaturase family protein	F:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPV	O.I.	C.G.	H.G.
21.8	99.6	127.2	At4g38660	830022	thaumatin, putative	F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOV	O.I.	C.G.	H.G.
21.8	99.6	33.8	At5g07690	830662	ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29)	Encodes a putative transcription factor (MYB29).	O.I.	C.G.	H.G.
21.6	99.6	28.2	At4g00480	827965	myc-related transcription factor (MYC1)	MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus	O.I.	C.G.	H.G.
21.5	99.6	44.9	At4g00180	827914	YAB3 (YABBY3)	YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades.	O.I.	C.G.	H.G.
21.3	99.6	57.4	At3g11600	820333	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
21.1	99.6	199.2	At1g01060	839341	LHY (LATE ELONGATED HYPOCOTYL)	LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1	O.I.	C.G.	H.G.
21.1	99.6	6.0	At1g31040	839990	unknown protein	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
20.9	99.6	71.8	At2g45190	819127	AFO (ABNORMAL FLORAL ORGANS)	Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).	O.I.	C.G.	H.G.
20.5	99.6	13.2	At4g03205	828029	coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative	F:coproporphyrinogen oxidase activity;P:porphyrin biosynthetic process;C:chloroplast;OBFMP	O.I.	C.G.	H.G.
20.4	99.6	16.6	At1g55200	841963	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
20.4	99.6	6.9	At1g75430	843879	BLH11 (BEL1-LIKE HOMEODOMAIN 11)	F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
20.1	99.6	62.8	At4g34160	829564	CYCD3	encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.	O.I.	C.G.	H.G.
19.5	99.6	94.3	At5g10180	830882	AST68	Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation.	O.I.	C.G.	H.G.
19.4	99.6	64.8	At4g15620	827239	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
19.4	99.6	58.8	At1g66760	842994	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA	O.I.	C.G.	H.G.
19.1	99.6	13.9	At3g02500	821065	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.8	99.5	14.6	At2g31150	817671	ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism	F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding;P:ATP biosynthetic process;C:membrane;OMBFPVA	O.I.	C.G.	H.G.
18.4	99.5	129.9	At5g67260	836861	CYCD3	Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.	O.I.	C.G.	H.G.
18.4	99.5	36.5	At4g32980	829435	ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1)	Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.	O.I.	C.G.	H.G.
18.4	99.5	32.4	At1g05230	839256	HDG2 (HOMEODOMAIN GLABROUS 2)	Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.	O.I.	C.G.	H.G.
18.4	99.5	9.0	At1g68480	843177	JAG (JAGGED)	Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development.	O.I.	C.G.	H.G.
18.2	99.5	50.4	At4g04850	825822	KEA3	member of Putative potassium transporter family	O.I.	C.G.	H.G.
18.0	99.5	23.8	At4g32710	3770575	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
17.7	99.5	100.5	At2g46830	819296	CCA1 (CIRCADIAN CLOCK ASSOCIATED 1)	Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.	O.I.	C.G.	H.G.
17.5	99.5	44.4	At2g34710	818036	PHB (PHABULOSA)	Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.	O.I.	C.G.	H.G.
17.5	99.5	10.6	At5g24750	832544	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BFPOVM	O.I.	C.G.	H.G.
17.2	99.5	77.9	At4g37750	829931	ANT (AINTEGUMENTA)	ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.	O.I.	C.G.	H.G.
17.2	99.5	24.5	At5g41070	834109	DRB5 (DSRNA-BINDING PROTEIN 5)	Encodes a double-stranded RNA binding protein.	O.I.	C.G.	H.G.
16.9	99.5	18.6	At3g10010	820162	DML2 (DEMETER-LIKE 2)	Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks.	O.I.	C.G.	H.G.
16.7	99.5	214.2	At4g22490	828344	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
16.4	99.5	54.9	At1g35612	3766952	transposable element gene	pseudogene of Ulp1 protease family protein	O.I.	C.G.	H.G.
16.3	99.5	27.6	At2g36400	818213	AtGRF3 (GROWTH-REGULATING FACTOR 3)	Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower.	O.I.	C.G.	H.G.
16.2	99.5	26.7	At5g22700	832333	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
16.1	99.5	93.2	At3g61310	825303	DNA-binding family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
16.0	99.5	139.7	At5g54510	835539	DFL1 (DWARF IN LIGHT 1)	Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).	O.I.	C.G.	H.G.
16.0	99.5	81.6	At5g28640	832968	AN3 (ANGUSTIFOLIA 3)	Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.	O.I.	C.G.	H.G.
15.5	99.5	26.8	At2g36810	818253	binding	F:binding;P:biological_process unknown;C:chloroplast;MPO	O.I.	C.G.	H.G.
15.3	99.4	98.3	At3g02380	821298	COL2 (constans-like 2)	homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins	O.I.	C.G.	H.G.
15.3	99.4	32.5	At3g57470	824914	peptidase M16 family protein / insulinase family protein	F:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
15.3	99.4	29.3	At4g14720	827125	PPD2	PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth.	O.I.	C.G.	H.G.
15.3	99.4	8.3	At5g56490	835750	FAD-binding domain-containing protein	F:oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BOFPMA	O.I.	C.G.	H.G.
15.2	99.4	82.8	At5g23940	832459	EMB3009 (embryo defective 3009)	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
15.2	99.4	25.6	At5g27360	832795	SFP2	Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence.	O.I.	C.G.	H.G.
15.2	99.4	23.6	At3g13000	820486	transcription factor	F:transcription factor activity;P:regulation of transcription;C:vacuole;PBOMF	O.I.	C.G.	H.G.
15.1	99.4	139.8	At2g26330	817173	ER (ERECTA)	Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.	O.I.	C.G.	H.G.
15.1	99.4	41.9	At1g19680	838555	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;OPMBF	O.I.	C.G.	H.G.
15.0	99.4	126.6	At3g02110	821207	scpl25 (serine carboxypeptidase-like 25)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB	O.I.	C.G.	H.G.
14.7	99.4	102.8	At4g37550	829910	formamidase, putative / formamide amidohydrolase, putative	F:formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;P:metabolic process;C:vacuole;BOFAP	O.I.	C.G.	H.G.
14.7	99.4	15.9	At1g79420	844280	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.6	99.4	44.8	At5g48360	834889	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBA	O.I.	C.G.	H.G.
14.5	99.4	30.8	At2g45850	819193	DNA-binding family protein	F:DNA binding;P:biological_process unknown;C:nucleus;PMFOB	O.I.	C.G.	H.G.
14.4	99.4	83.3	At4g21750	828263	ATML1 (MERISTEM LAYER 1)	Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.	O.I.	C.G.	H.G.
14.4	99.4	56.1	At3g55130	824679	ATWBC19 (White-Brown Complex homolog 19)	Encodes a vacuole localized protein of the ABC transporter White-Brown Complex (WBC) family. When overexpressed in planta, confers resistance to kanamycin.	O.I.	C.G.	H.G.
14.4	99.4	19.3	At3g46490	823802	iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:secondary metabolic process;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
14.4	99.4	17.5	At5g46880	834733	HB-7 (HOMEOBOX-7)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOB	O.I.	C.G.	H.G.
14.3	99.4	40.8	At1g60160	842311	potassium transporter family protein	F:potassium ion transmembrane transporter activity;P:potassium ion transport;C:chloroplast;BPOFAV	O.I.	C.G.	H.G.
14.3	99.4	9.4	At3g26920	822308	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF	O.I.	C.G.	H.G.
14.2	99.4	22.0	At1g60270	3767579	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
14.1	99.4	116.0	At2g33850	817954	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAV	O.I.	C.G.	H.G.
14.1	99.4	86.3	At2g41250	818724	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity;P:metabolic process;C:mitochondrion;BOMAPF	O.I.	C.G.	H.G.
14.1	99.4	47.4	At5g24620	832533	thaumatin-like protein, putative	F:unknown;P:response to other organism;C:endomembrane system;MPOFBVA	O.I.	C.G.	H.G.
14.1	99.4	32.6	At5g18460	831964	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	O.I.	C.G.	H.G.
14.1	99.4	13.7	At4g09160	826497	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	F:transporter activity;P:transport;C:chloroplast;MOFBPVA	O.I.	C.G.	H.G.
14.0	99.4	17.0	At4g10910	826689	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.0	99.4	14.4	At5g47380	834785	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBO	O.I.	C.G.	H.G.
13.9	99.4	64.9	At1g14410	838003	WHY1 (WHIRLY 1)	Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.	O.I.	C.G.	H.G.
13.9	99.4	18.4	At5g66940	836828	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO	O.I.	C.G.	H.G.
13.8	99.4	90.3	At1g66430	842961	pfkB-type carbohydrate kinase family protein	F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:chloroplast, chloroplast stroma;BOPAMF	O.I.	C.G.	H.G.
13.7	99.4	11.2	At4g36270	829784	ATP binding	F:ATP binding;P:biological_process unknown;C:cellular_component unknown;MPOB	O.I.	C.G.	H.G.
13.7	99.4	8.8	At5g11320	831003	YUC4 (YUCCA4)	Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.	O.I.	C.G.	H.G.
13.5	99.4	42.8	At4g36980	829852	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPVB	O.I.	C.G.	H.G.
13.5	99.4	27.2	At4g00820	828002	iqd17 (IQ-domain 17)	F:calmodulin binding;P:biological_process unknown;C:unknown;POMFVB	O.I.	C.G.	H.G.
13.5	99.4	21.4	At5g38140	833794	NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFO	O.I.	C.G.	H.G.
13.4	99.4	24.3	At3g57780	824947	-	F:unknown;P:unknown;C:unknown;OMFBPVA	O.I.	C.G.	H.G.

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GSM ID	GSM318625
Assay name	Apex_octa_18DAS_2
GSE experiment	GSE12691: Knockdown and overexpression of CIN-TCP genes

Microarray experiments to specifically-expressed genes

GSM ID GSM318625 Assay name Apex_octa_18DAS_2 GSE experiment GSE12691: Knockdown and overexpression of CIN-TCP genes

GSM ID GSM318625

Assay name Apex_octa_18DAS_2

GSE experiment GSE12691: Knockdown and overexpression of CIN-TCP genes