CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM311295

Assay name Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1

GSE experiment GSE12403: Expression data from Arabidopsis seed compartments at the linear-cotyledon stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
2371.8 100.0 202.7 At3g50990 824263 electron carrier/ heme binding / peroxidase F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO O.I. C.G. H.G.
1539.7 100.0 360.1 At1g09550 837481 pectinacetylesterase, putative F:carboxylesterase activity;P:biological_process unknown;C:endomembrane system;PMOB O.I. C.G. H.G.
1255.7 100.0 381.7 At1g02590 839372 aldehyde oxidase, putative F:electron carrier activity, oxidoreductase activity, aldehyde oxidase activity;P:biological_process unknown;C:cellular_component unknown;MOBPF O.I. C.G. H.G.
1221.9 100.0 258.6 At3g14760 820704 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
938.6 100.0 120.7 At1g20500 838638 4-coumarate-CoA ligase F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
857.5 100.0 57.9 At5g52500 835326 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
744.1 100.0 309.1 At4g11180 826720 disease resistance-responsive family protein / dirigent family protein F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
722.8 100.0 201.3 At5g54400 835528 methyltransferase F:methyltransferase activity;P:metabolic process;C:plasma membrane;BOAFPM O.I. C.G. H.G.
707.0 100.0 727.1 At4g28365 828952 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PBFM O.I. C.G. H.G.
585.9 100.0 553.1 At1g53500 841785 MUM4 (MUCILAGE-MODIFIED 4) encodes a putative NDP-L-rhamnose synthase, an enzyme required for the synthesis of the pectin rhamnogalacturonan I, the major component of Arabidopsis mucilage. Gene is involved in seed coat mucilage cell development. Mutant analyses suggest that MUM4 is required for complete mucilage synthesis, cytoplasmic rearrangement and seed coat development. O.I. C.G. H.G.
578.4 100.0 315.1 At5g60630 836184 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
567.8 100.0 66.7 At1g28650 839765 lipase, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
556.1 100.0 199.7 At2g23580 816890 MES4 (METHYL ESTERASE 4) Encodes a protein shown to have carboxylesterase activity and methyl salicylate esterase activity in vitro. This protein does not act on methyl IAA, methyl JA, MeGA4, or MEGA9 in vitro. O.I. C.G. H.G.
548.5 100.0 110.3 At3g12020 820376 kinesin motor protein-related F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFBPAV O.I. C.G. H.G.
507.8 100.0 234.8 At1g21140 838710 nodulin, putative F:unknown;P:biological_process unknown;C:unknown;BOPFA O.I. C.G. H.G.
492.4 100.0 142.8 At2g23550 816887 MES6 (METHYL ESTERASE 6) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein. O.I. C.G. H.G.
469.8 100.0 65.9 At4g20820 827830 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:unknown;FBPOAM O.I. C.G. H.G.
443.9 100.0 184.9 At1g11590 837702 pectin methylesterase, putative F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOM O.I. C.G. H.G.
441.5 100.0 120.8 At1g05280 837026 fringe-related protein F:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PFMO O.I. C.G. H.G.
428.6 100.0 438.4 At5g59845 836106 gibberellin-regulated family protein F:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;P O.I. C.G. H.G.
424.3 100.0 345.5 At5g48100 834862 TT10 (TRANSPARENT TESTA 10) Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds. O.I. C.G. H.G.
419.1 100.0 460.8 At1g30530 839933 UGT78D1 (UDP-GLUCOSYL TRANSFERASE 78D1) The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin O.I. C.G. H.G.
416.6 100.0 186.2 At3g24480 822038 leucine-rich repeat family protein / extensin family protein F:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;PMOBFVA O.I. C.G. H.G.
407.5 100.0 501.9 At1g29050 839779 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
405.0 100.0 334.3 At5g62150 836335 peptidoglycan-binding LysM domain-containing protein F:molecular_function unknown;P:cell wall macromolecule catabolic process;C:endomembrane system;P O.I. C.G. H.G.
396.7 100.0 258.7 At1g62990 842602 KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7) Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46. O.I. C.G. H.G.
386.8 100.0 238.4 At2g16890 816190 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;P O.I. C.G. H.G.
373.7 100.0 159.7 At1g79840 844323 GL2 (GLABRA 2) Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER. O.I. C.G. H.G.
370.6 100.0 101.7 At5g47150 834761 YDG/SRA domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBF O.I. C.G. H.G.
340.8 100.0 43.0 At1g28170 839711 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF O.I. C.G. H.G.
337.8 100.0 124.4 At1g68730 843204 zinc finger (DNL type) family protein F:unknown;P:unknown;C:chloroplast;MFPO O.I. C.G. H.G.
322.4 100.0 86.6 At2g15440 816036 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
317.6 100.0 46.8 At2g47670 819380 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
306.0 100.0 863.9 At1g62000 842495 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
305.0 100.0 58.8 At4g09820 826571 TT8 (TRANSPARENT TESTA 8) TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. O.I. C.G. H.G.
298.0 100.0 73.1 At4g01140 828157 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
290.1 100.0 89.3 At4g03930 825703 enzyme inhibitor/ pectinesterase F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
286.9 100.0 51.7 At1g63300 842636 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPAV O.I. C.G. H.G.
285.4 100.0 166.6 At4g26590 828766 OPT5 (OLIGOPEPTIDE TRANSPORTER 5) oligopeptide transporter O.I. C.G. H.G.
274.2 100.0 45.1 At3g62610 825435 ATMYB11 (MYB DOMAIN PROTEIN 11) Member of the R2R3 factor gene family. O.I. C.G. H.G.
268.0 100.0 204.9 At2g39220 818507 PLP6 (PATATIN-LIKE PROTEIN 6) F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:unknown;PBOMF O.I. C.G. H.G.
256.8 100.0 598.3 At5g58930 836010 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POFM O.I. C.G. H.G.
249.9 100.0 174.8 At5g60820 836203 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBV O.I. C.G. H.G.
248.7 100.0 442.6 At2g07711 3768480 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
238.2 100.0 145.2 At1g71170 843457 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein F:coenzyme binding, oxidoreductase activity, binding, phosphogluconate dehydrogenase (decarboxylating) activity, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
228.4 100.0 438.2 At3g23450 3768908 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system O.I. C.G. H.G.
222.6 100.0 127.4 At2g22620 816793 lyase F:lyase activity;P:carbohydrate metabolic process;C:unknown;PFBO O.I. C.G. H.G.
221.6 100.0 126.5 At1g16390 838209 ATOCT3 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 3) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA O.I. C.G. H.G.
220.0 100.0 73.6 At3g50620 824225 nodulation protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
212.7 100.0 133.5 At5g01790 831868 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
211.1 100.0 57.2 At2g35585 818124 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
209.5 100.0 159.7 At1g19640 838551 JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE) Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment. O.I. C.G. H.G.
206.8 100.0 135.0 At1g49580 841382 calcium-dependent protein kinase, putative / CDPK, putative F:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MOPFBVA O.I. C.G. H.G.
203.3 100.0 47.8 At1g14970 838062 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
196.7 100.0 318.1 At5g49180 834977 pectinesterase family protein Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds. O.I. C.G. H.G.
195.2 100.0 1094.6 At5g38170 833797 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
193.9 100.0 120.6 At1g19970 838586 ER lumen protein retaining receptor family protein F:ER retention sequence binding, receptor activity;P:protein retention in ER lumen, protein transport;C:integral to membrane;MOPF O.I. C.G. H.G.
192.7 100.0 165.2 At1g03920 839369 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVA O.I. C.G. H.G.
192.5 100.0 50.6 At1g72220 843554 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
185.2 100.0 220.4 At2g07687 815364 cytochrome c oxidase subunit 3 F:cytochrome-c oxidase activity;P:mitochondrial electron transport, cytochrome c to oxygen;C:membrane;MOBPFA O.I. C.G. H.G.
182.3 100.0 896.2 At4g12960 826908 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
182.3 100.0 79.3 At1g09540 837480 MYB61 (MYB DOMAIN PROTEIN 61) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size. O.I. C.G. H.G.
181.7 100.0 193.3 At2g42830 818883 SHP2 (SHATTERPROOF 2) AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG). O.I. C.G. H.G.
181.3 100.0 553.5 At5g38160 833796 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
172.1 100.0 27.5 At3g49380 824100 iqd15 (IQ-domain 15) F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
170.3 100.0 239.6 At4g12890 826901 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
168.9 100.0 93.3 At4g35840 829738 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
160.7 99.9 72.0 At1g15700 838139 ATPC2 One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity. O.I. C.G. H.G.
159.9 99.9 131.5 At2g35290 818096 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
155.9 99.9 30.8 At1g09155 837435 AtPP2-B15 (Phloem protein 2-B15) F:carbohydrate binding;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
154.3 99.9 95.5 At5g24910 832560 CYP714A1 member of CYP714A O.I. C.G. H.G.
149.6 99.9 65.0 At1g34580 840362 monosaccharide transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA O.I. C.G. H.G.
148.8 99.9 167.1 At1g23200 838928 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFAOM O.I. C.G. H.G.
144.3 99.9 64.4 At2g25220 817060 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
143.8 99.9 219.1 At1g44810 841045 transcription regulator F:transcription regulator activity;P:biological_process unknown;C:cellular_component unknown;MOFPBV O.I. C.G. H.G.
138.3 99.9 59.6 At1g71910 843522 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
135.0 99.9 305.2 At4g36700 829823 cupin family protein F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOFBPVA O.I. C.G. H.G.
134.3 99.9 89.6 At4g37050 829859 PLP4 (PATATIN-LIKE PROTEIN 4) F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOMF O.I. C.G. H.G.
130.9 99.9 972.8 At5g59310 836050 LTP4 (LIPID TRANSFER PROTEIN 4) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
129.9 99.9 64.3 At2g44730 819080 transcription factor F:transcription factor activity;P:regulation of transcription;C:chloroplast;PMOBFV O.I. C.G. H.G.
128.2 99.9 83.9 At4g00820 828002 iqd17 (IQ-domain 17) F:calmodulin binding;P:biological_process unknown;C:unknown;POMFVB O.I. C.G. H.G.
126.1 99.9 22.0 At2g23570 816889 MES19 (METHYL ESTERASE 19) Encodes a protein with similarity to SABP2, a methyl salicylate esterase from tobacco. However, this protein is truncated and lacks one of the residues of the predicted catalytic triad, suggesting that it does not have this enzymatic activity. O.I. C.G. H.G.
125.1 99.9 82.2 At1g71180 843458 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
121.4 99.9 26.7 At4g24030 828503 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
120.3 99.9 79.4 At1g08810 837403 MYB60 (myb domain protein 60) putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought. O.I. C.G. H.G.
120.1 99.9 106.0 At1g11170 837658 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
118.2 99.9 214.1 At1g65440 842855 GTB1 Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly. O.I. C.G. H.G.
118.1 99.9 25.9 At1g62900 842591 O-methyltransferase, putative F:O-methyltransferase activity;P:unknown;C:cytosol;PBFOM O.I. C.G. H.G.
116.6 99.9 47.8 At3g52550 824421 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPVB O.I. C.G. H.G.
116.4 99.9 96.2 At4g34500 829601 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
116.3 99.9 28.2 At5g39130 833906 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOB O.I. C.G. H.G.
115.0 99.9 95.2 At1g14380 838000 IQD28 (IQ67 DOMAIN PROTEIN 28) F:calmodulin binding;P:biological_process unknown;C:plasma membrane;MOPFBV O.I. C.G. H.G.
112.6 99.9 108.3 At3g20100 821553 CYP705A19 member of CYP705A O.I. C.G. H.G.
112.2 99.9 125.9 At3g52870 824453 calmodulin-binding family protein F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFBO O.I. C.G. H.G.
110.2 99.9 66.5 At5g62500 836370 ATEB1B (END BINDING PROTEIN 1B) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. O.I. C.G. H.G.
108.5 99.9 127.2 At5g47330 834780 palmitoyl protein thioesterase family protein F:palmitoyl-(protein) hydrolase activity;P:response to salt stress;C:endomembrane system;MPFO O.I. C.G. H.G.
106.3 99.9 54.4 At1g19940 838583 AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
104.5 99.9 103.1 At2g35620 818130 FEI2 (FEI 2) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots. O.I. C.G. H.G.
101.9 99.9 94.9 At4g34138 829561 UGT73B1 (UDP-glucosyl transferase 73B1) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
101.5 99.9 57.8 At4g22110 828300 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
2371.8	100.0	202.7	At3g50990	824263	electron carrier/ heme binding / peroxidase	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO	O.I.	C.G.	H.G.
1539.7	100.0	360.1	At1g09550	837481	pectinacetylesterase, putative	F:carboxylesterase activity;P:biological_process unknown;C:endomembrane system;PMOB	O.I.	C.G.	H.G.
1255.7	100.0	381.7	At1g02590	839372	aldehyde oxidase, putative	F:electron carrier activity, oxidoreductase activity, aldehyde oxidase activity;P:biological_process unknown;C:cellular_component unknown;MOBPF	O.I.	C.G.	H.G.
1221.9	100.0	258.6	At3g14760	820704	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
938.6	100.0	120.7	At1g20500	838638	4-coumarate-CoA ligase	F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
857.5	100.0	57.9	At5g52500	835326	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
744.1	100.0	309.1	At4g11180	826720	disease resistance-responsive family protein / dirigent family protein	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
722.8	100.0	201.3	At5g54400	835528	methyltransferase	F:methyltransferase activity;P:metabolic process;C:plasma membrane;BOAFPM	O.I.	C.G.	H.G.
707.0	100.0	727.1	At4g28365	828952	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PBFM	O.I.	C.G.	H.G.
585.9	100.0	553.1	At1g53500	841785	MUM4 (MUCILAGE-MODIFIED 4)	encodes a putative NDP-L-rhamnose synthase, an enzyme required for the synthesis of the pectin rhamnogalacturonan I, the major component of Arabidopsis mucilage. Gene is involved in seed coat mucilage cell development. Mutant analyses suggest that MUM4 is required for complete mucilage synthesis, cytoplasmic rearrangement and seed coat development.	O.I.	C.G.	H.G.
578.4	100.0	315.1	At5g60630	836184	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
567.8	100.0	66.7	At1g28650	839765	lipase, putative	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
556.1	100.0	199.7	At2g23580	816890	MES4 (METHYL ESTERASE 4)	Encodes a protein shown to have carboxylesterase activity and methyl salicylate esterase activity in vitro. This protein does not act on methyl IAA, methyl JA, MeGA4, or MEGA9 in vitro.	O.I.	C.G.	H.G.
548.5	100.0	110.3	At3g12020	820376	kinesin motor protein-related	F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFBPAV	O.I.	C.G.	H.G.
507.8	100.0	234.8	At1g21140	838710	nodulin, putative	F:unknown;P:biological_process unknown;C:unknown;BOPFA	O.I.	C.G.	H.G.
492.4	100.0	142.8	At2g23550	816887	MES6 (METHYL ESTERASE 6)	Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.	O.I.	C.G.	H.G.
469.8	100.0	65.9	At4g20820	827830	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:unknown;FBPOAM	O.I.	C.G.	H.G.
443.9	100.0	184.9	At1g11590	837702	pectin methylesterase, putative	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOM	O.I.	C.G.	H.G.
441.5	100.0	120.8	At1g05280	837026	fringe-related protein	F:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PFMO	O.I.	C.G.	H.G.
428.6	100.0	438.4	At5g59845	836106	gibberellin-regulated family protein	F:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;P	O.I.	C.G.	H.G.
424.3	100.0	345.5	At5g48100	834862	TT10 (TRANSPARENT TESTA 10)	Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.	O.I.	C.G.	H.G.
419.1	100.0	460.8	At1g30530	839933	UGT78D1 (UDP-GLUCOSYL TRANSFERASE 78D1)	The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin	O.I.	C.G.	H.G.
416.6	100.0	186.2	At3g24480	822038	leucine-rich repeat family protein / extensin family protein	F:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;PMOBFVA	O.I.	C.G.	H.G.
407.5	100.0	501.9	At1g29050	839779	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
405.0	100.0	334.3	At5g62150	836335	peptidoglycan-binding LysM domain-containing protein	F:molecular_function unknown;P:cell wall macromolecule catabolic process;C:endomembrane system;P	O.I.	C.G.	H.G.
396.7	100.0	258.7	At1g62990	842602	KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7)	Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.	O.I.	C.G.	H.G.
386.8	100.0	238.4	At2g16890	816190	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;P	O.I.	C.G.	H.G.
373.7	100.0	159.7	At1g79840	844323	GL2 (GLABRA 2)	Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.	O.I.	C.G.	H.G.
370.6	100.0	101.7	At5g47150	834761	YDG/SRA domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBF	O.I.	C.G.	H.G.
340.8	100.0	43.0	At1g28170	839711	sulfotransferase family protein	F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF	O.I.	C.G.	H.G.
337.8	100.0	124.4	At1g68730	843204	zinc finger (DNL type) family protein	F:unknown;P:unknown;C:chloroplast;MFPO	O.I.	C.G.	H.G.
322.4	100.0	86.6	At2g15440	816036	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
317.6	100.0	46.8	At2g47670	819380	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
306.0	100.0	863.9	At1g62000	842495	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
305.0	100.0	58.8	At4g09820	826571	TT8 (TRANSPARENT TESTA 8)	TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.	O.I.	C.G.	H.G.
298.0	100.0	73.1	At4g01140	828157	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
290.1	100.0	89.3	At4g03930	825703	enzyme inhibitor/ pectinesterase	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
286.9	100.0	51.7	At1g63300	842636	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPAV	O.I.	C.G.	H.G.
285.4	100.0	166.6	At4g26590	828766	OPT5 (OLIGOPEPTIDE TRANSPORTER 5)	oligopeptide transporter	O.I.	C.G.	H.G.
274.2	100.0	45.1	At3g62610	825435	ATMYB11 (MYB DOMAIN PROTEIN 11)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
268.0	100.0	204.9	At2g39220	818507	PLP6 (PATATIN-LIKE PROTEIN 6)	F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:unknown;PBOMF	O.I.	C.G.	H.G.
256.8	100.0	598.3	At5g58930	836010	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POFM	O.I.	C.G.	H.G.
249.9	100.0	174.8	At5g60820	836203	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBV	O.I.	C.G.	H.G.
248.7	100.0	442.6	At2g07711	3768480	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
238.2	100.0	145.2	At1g71170	843457	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	F:coenzyme binding, oxidoreductase activity, binding, phosphogluconate dehydrogenase (decarboxylating) activity, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
228.4	100.0	438.2	At3g23450	3768908	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system	O.I.	C.G.	H.G.
222.6	100.0	127.4	At2g22620	816793	lyase	F:lyase activity;P:carbohydrate metabolic process;C:unknown;PFBO	O.I.	C.G.	H.G.
221.6	100.0	126.5	At1g16390	838209	ATOCT3 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 3)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA	O.I.	C.G.	H.G.
220.0	100.0	73.6	At3g50620	824225	nodulation protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
212.7	100.0	133.5	At5g01790	831868	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
211.1	100.0	57.2	At2g35585	818124	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
209.5	100.0	159.7	At1g19640	838551	JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE)	Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.	O.I.	C.G.	H.G.
206.8	100.0	135.0	At1g49580	841382	calcium-dependent protein kinase, putative / CDPK, putative	F:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MOPFBVA	O.I.	C.G.	H.G.
203.3	100.0	47.8	At1g14970	838062	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
196.7	100.0	318.1	At5g49180	834977	pectinesterase family protein	Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds.	O.I.	C.G.	H.G.
195.2	100.0	1094.6	At5g38170	833797	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
193.9	100.0	120.6	At1g19970	838586	ER lumen protein retaining receptor family protein	F:ER retention sequence binding, receptor activity;P:protein retention in ER lumen, protein transport;C:integral to membrane;MOPF	O.I.	C.G.	H.G.
192.7	100.0	165.2	At1g03920	839369	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVA	O.I.	C.G.	H.G.
192.5	100.0	50.6	At1g72220	843554	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
185.2	100.0	220.4	At2g07687	815364	cytochrome c oxidase subunit 3	F:cytochrome-c oxidase activity;P:mitochondrial electron transport, cytochrome c to oxygen;C:membrane;MOBPFA	O.I.	C.G.	H.G.
182.3	100.0	896.2	At4g12960	826908	gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
182.3	100.0	79.3	At1g09540	837480	MYB61 (MYB DOMAIN PROTEIN 61)	Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.	O.I.	C.G.	H.G.
181.7	100.0	193.3	At2g42830	818883	SHP2 (SHATTERPROOF 2)	AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).	O.I.	C.G.	H.G.
181.3	100.0	553.5	At5g38160	833796	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
172.1	100.0	27.5	At3g49380	824100	iqd15 (IQ-domain 15)	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
170.3	100.0	239.6	At4g12890	826901	gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
168.9	100.0	93.3	At4g35840	829738	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
160.7	99.9	72.0	At1g15700	838139	ATPC2	One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity.	O.I.	C.G.	H.G.
159.9	99.9	131.5	At2g35290	818096	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
155.9	99.9	30.8	At1g09155	837435	AtPP2-B15 (Phloem protein 2-B15)	F:carbohydrate binding;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
154.3	99.9	95.5	At5g24910	832560	CYP714A1	member of CYP714A	O.I.	C.G.	H.G.
149.6	99.9	65.0	At1g34580	840362	monosaccharide transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
148.8	99.9	167.1	At1g23200	838928	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFAOM	O.I.	C.G.	H.G.
144.3	99.9	64.4	At2g25220	817060	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
143.8	99.9	219.1	At1g44810	841045	transcription regulator	F:transcription regulator activity;P:biological_process unknown;C:cellular_component unknown;MOFPBV	O.I.	C.G.	H.G.
138.3	99.9	59.6	At1g71910	843522	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
135.0	99.9	305.2	At4g36700	829823	cupin family protein	F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOFBPVA	O.I.	C.G.	H.G.
134.3	99.9	89.6	At4g37050	829859	PLP4 (PATATIN-LIKE PROTEIN 4)	F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOMF	O.I.	C.G.	H.G.
130.9	99.9	972.8	At5g59310	836050	LTP4 (LIPID TRANSFER PROTEIN 4)	Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
129.9	99.9	64.3	At2g44730	819080	transcription factor	F:transcription factor activity;P:regulation of transcription;C:chloroplast;PMOBFV	O.I.	C.G.	H.G.
128.2	99.9	83.9	At4g00820	828002	iqd17 (IQ-domain 17)	F:calmodulin binding;P:biological_process unknown;C:unknown;POMFVB	O.I.	C.G.	H.G.
126.1	99.9	22.0	At2g23570	816889	MES19 (METHYL ESTERASE 19)	Encodes a protein with similarity to SABP2, a methyl salicylate esterase from tobacco. However, this protein is truncated and lacks one of the residues of the predicted catalytic triad, suggesting that it does not have this enzymatic activity.	O.I.	C.G.	H.G.
125.1	99.9	82.2	At1g71180	843458	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
121.4	99.9	26.7	At4g24030	828503	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
120.3	99.9	79.4	At1g08810	837403	MYB60 (myb domain protein 60)	putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.	O.I.	C.G.	H.G.
120.1	99.9	106.0	At1g11170	837658	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
118.2	99.9	214.1	At1g65440	842855	GTB1	Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.	O.I.	C.G.	H.G.
118.1	99.9	25.9	At1g62900	842591	O-methyltransferase, putative	F:O-methyltransferase activity;P:unknown;C:cytosol;PBFOM	O.I.	C.G.	H.G.
116.6	99.9	47.8	At3g52550	824421	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPVB	O.I.	C.G.	H.G.
116.4	99.9	96.2	At4g34500	829601	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
116.3	99.9	28.2	At5g39130	833906	germin-like protein, putative	F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOB	O.I.	C.G.	H.G.
115.0	99.9	95.2	At1g14380	838000	IQD28 (IQ67 DOMAIN PROTEIN 28)	F:calmodulin binding;P:biological_process unknown;C:plasma membrane;MOPFBV	O.I.	C.G.	H.G.
112.6	99.9	108.3	At3g20100	821553	CYP705A19	member of CYP705A	O.I.	C.G.	H.G.
112.2	99.9	125.9	At3g52870	824453	calmodulin-binding family protein	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
110.2	99.9	66.5	At5g62500	836370	ATEB1B (END BINDING PROTEIN 1B)	encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.	O.I.	C.G.	H.G.
108.5	99.9	127.2	At5g47330	834780	palmitoyl protein thioesterase family protein	F:palmitoyl-(protein) hydrolase activity;P:response to salt stress;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
106.3	99.9	54.4	At1g19940	838583	AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5)	F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
104.5	99.9	103.1	At2g35620	818130	FEI2 (FEI 2)	Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.	O.I.	C.G.	H.G.
101.9	99.9	94.9	At4g34138	829561	UGT73B1 (UDP-glucosyl transferase 73B1)	F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
101.5	99.9	57.8	At4g22110	828300	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.

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GSM ID	GSM311295
Assay name	Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1
GSE experiment	GSE12403: Expression data from Arabidopsis seed compartments at the linear-cotyledon stage

Microarray experiments to specifically-expressed genes

GSM ID GSM311295 Assay name Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1 GSE experiment GSE12403: Expression data from Arabidopsis seed compartments at the linear-cotyledon stage

GSM ID GSM311295

Assay name Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1

GSE experiment GSE12403: Expression data from Arabidopsis seed compartments at the linear-cotyledon stage