Microarray experiments to specifically-expressed genes

GSM ID	GSM309531
Assay name	storage protein suppression expt, RNAi biol rep2, tech rep2
GSE experiment	GSE12314: Storage Protein Suppression in Transgenic Soybean Cotyledons

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
574.2	100.0	15.3	Gma.17831.1.S1_at	AW277767	-	-	3e-1	At5g27810	sequence-specific DNA binding / transcription factor	O.I.	C.G.	H.G.	Please select
495.5	100.0	22.4	GmaAffx.78359.1.S1_at	AW704764	-	-	1e+0	At5g10030	TGA4 (TGACG MOTIF-BINDING FACTOR 4)	O.I.	C.G.	H.G.	Please select
472.5	100.0	6.1	GmaAffx.46261.1.A1_at	BG654058	-	-	3e+0	At3g48160	DEL1 (DP-E2F-LIKE 1)	O.I.	C.G.	H.G.	Please select
465.5	100.0	11.4	GmaAffx.16549.1.S1_at	AW472528	-	-	3e+0	At5g45130	RHA1 (RAB HOMOLOG 1)	O.I.	C.G.	H.G.	Please select
444.6	100.0	6.1	GmaAffx.40114.1.S1_at	BI973325	-	-	3e+0	At3g58210	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	C.G.	H.G.	Please select
407.8	100.0	17.9	GmaAffx.71222.1.S1_at	AW460050	-	-	3e-3	At1g15330	CBS domain-containing protein	O.I.	C.G.	H.G.	Please select
407.5	100.0	97.4	GmaAffx.67969.1.S1_at	AW395744	-	-	8e-2	At4g10020	AtHSD5 (hydroxysteroid dehydrogenase 5)	O.I.	C.G.	H.G.	Please select
407.2	100.0	116.6	GmaAffx.79126.1.S1_at	AW508783	-	-	4e+0	At5g16460	-	O.I.	C.G.	H.G.	Please select
384.4	100.0	1.4	GmaAffx.51409.1.S1_at	BM309035	-	-	6e-3	At1g16390	ATOCT3 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 3)	O.I.	C.G.	H.G.	Please select
366.8	100.0	9.7	Gma.12698.2.S1_at	BU965512	-	-	3e-22	At5g08380	AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1)	O.I.	C.G.	H.G.	Please select
364.6	100.0	164.4	GmaAffx.84879.1.S1_at	AI735921	-	-	6e-15	At1g17810	BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)	O.I.	C.G.	H.G.	Please select
361.8	100.0	129.8	Gma.939.1.A1_at	BE823645	-	-	2e-8	At3g05260	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	C.G.	H.G.	Please select
351.3	100.0	6.4	GmaAffx.80343.1.S1_at	BG315702	-	-	1e-3	At5g44260	zinc finger (CCCH-type) family protein	O.I.	C.G.	H.G.	Please select
344.4	100.0	109.6	GmaAffx.48565.1.S1_at	AW508696	-	-	9e-1	At3g01910	SOX (SULFITE OXIDASE)	O.I.	C.G.	H.G.	Please select
341.5	100.0	189.2	Gma.7195.1.A1_at	BU545511	-	-	4e+0	At5g16950	unknown protein	O.I.	C.G.	H.G.	Please select
340.3	100.0	70.3	GmaAffx.50725.2.S1_s_at	BI974508	-	-	3e+0	At5g40710	zinc finger (C2H2 type) family protein	O.I.	C.G.	H.G.	Please select
338.7	100.0	152.5	Gma.8531.1.S1_at	AF117885.1	seed maturation protein PM31	-	2e-2	At5g59720	HSP18.2 (heat shock protein 18.2)	O.I.	C.G.	H.G.	Please select
336.1	100.0	0.1	GmaAffx.21180.1.S1_at	AW508697	-	-	3e+0	At5g28000	Bet v I allergen family protein	O.I.	C.G.	H.G.	Please select
333.5	100.0	0.2	GmaAffx.39321.1.S1_at	AW508721	-	-	1e-2	At2g21720	unknown protein	O.I.	C.G.	H.G.	Please select
332.6	100.0	3.4	GmaAffx.23810.1.S1_at	BM528843	-	-	1e+0	At4g14147	ARPC4	O.I.	C.G.	H.G.	Please select
332.4	100.0	21.9	Gma.581.2.S1_a_at	BU545623	-	-	9e-1	At5g06760	late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein	O.I.	C.G.	H.G.	Please select
328.4	100.0	29.1	GmaAffx.57612.1.S1_at	AW568460	-	-	1e+0	At3g43682	unknown protein	O.I.	C.G.	H.G.	Please select
325.3	100.0	3.0	GmaAffx.84877.1.S1_at	AW472321	-	-	2e-2	At5g40690	-	O.I.	C.G.	H.G.	Please select
323.3	100.0	166.3	Gma.1816.1.S1_a_at	J05560.1	34 kDa maturing seed vacuolar thiol protease mRNA, complete cds	-	2e-1	At3g19400	cysteine proteinase, putative	O.I.	C.G.	H.G.	Please select
319.4	100.0	14.2	Gma.10729.2.S1_at	CA801752	-	-	1e+0	At5g63530	ATFP3	O.I.	C.G.	H.G.	Please select
315.4	100.0	19.9	GmaAffx.73698.1.S1_at	BU964780	-	-	1e+0	At1g15330	CBS domain-containing protein	O.I.	C.G.	H.G.	Please select
314.3	100.0	1.2	GmaAffx.74705.1.S1_at	AW509066	-	-	8e-1	At4g28930	unknown protein	O.I.	C.G.	H.G.	Please select
313.2	100.0	2.6	GmaAffx.42595.1.A1_at	AW705738	-	-	1e-4	At1g18500	MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4)	O.I.	C.G.	H.G.	Please select
312.1	100.0	2.0	GmaAffx.1518.1.S1_at	BE824060	-	-	3e-1	At5g02100	UNE18 (UNFERTILIZED EMBRYO SAC 18)	O.I.	C.G.	H.G.	Please select
309.0	100.0	16.0	GmaAffx.85832.1.S1_at	CA802473	-	-	2e-2	At3g18460	unknown protein	O.I.	C.G.	H.G.	Please select
308.1	100.0	68.2	Gma.1880.2.S1_at	AW704809	-	-	3e+0	At5g25890	IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)	O.I.	C.G.	H.G.	Please select
307.2	100.0	167.8	Gma.2863.1.S1_at	CA802892	-	-	2e-9	At4g18920	unknown protein	O.I.	C.G.	H.G.	Please select
305.2	100.0	0.9	GmaAffx.62186.2.S1_at	BM094164	-	-	8e-1	At3g15190	chloroplast 30S ribosomal protein S20, putative	O.I.	C.G.	H.G.	Please select
303.8	100.0	152.2	Gma.901.1.S1_at	BE819860	24 kDa oleosin isoform (clone P24/91)	-	5e-1	At5g64850	unknown protein	O.I.	C.G.	H.G.	Please select
301.5	100.0	134.0	Gma.3009.1.S1_at	AF004808.1	metallothionein-II protein	-	4e+0	At5g24200	triacylglycerol lipase	O.I.	C.G.	H.G.	Please select
301.4	100.0	1.1	Gma.17792.1.S1_at	BE658048	-	-	2e-2	At2g36000	mitochondrial transcription termination factor-related / mTERF-related	O.I.	C.G.	H.G.	Please select
296.3	100.0	156.2	Gma.13356.1.S1_at	AB046874.1	allergen Gly m Bd 28K	-	2e-1	At5g62130	Per1-like protein-related	O.I.	C.G.	H.G.	Please select
295.8	100.0	199.8	Gma.8432.1.S1_at	U59425.1	precursor (AA -24 to 403)	-	3e+0	At4g28990	RNA-binding protein-related	O.I.	C.G.	H.G.	Please select
294.2	100.0	199.8	GmaAffx.79829.1.S1_at	AI941230	-	-	8e-17	At1g17810	BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)	O.I.	C.G.	H.G.	Please select
289.8	100.0	138.5	Gma.8690.1.S1_at	BE823711	-	-	1e+0	At3g50890	AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28)	O.I.	C.G.	H.G.	Please select
289.8	100.0	116.0	GmaAffx.35952.1.S1_at	BE823689	-	-	3e-4	At5g59720	HSP18.2 (heat shock protein 18.2)	O.I.	C.G.	H.G.	Please select
289.1	100.0	294.8	Gma.16820.1.S1_s_at	X05652.1	glycinin A5A4B3 /// A5A4B3 subunits precursor (aa -23 to 539) /// glycinin	-	5e-3	At5g19260	unknown protein	O.I.	C.G.	H.G.	Please select
288.1	100.0	233.3	Gma.189.1.S1_at	M20732.1	protease inhibitor C-II	-	2e-1	At1g69818	-	O.I.	C.G.	H.G.	Please select
284.4	100.0	163.9	Gma.1850.1.S1_at	BG237277	-	-	2e+0	At5g65166	unknown protein	O.I.	C.G.	H.G.	Please select
283.7	100.0	0.1	GmaAffx.71386.1.S1_at	AW704747	-	-	1e-20	At4g28480	DNAJ heat shock family protein	O.I.	C.G.	H.G.	Please select
280.7	100.0	256.8	Gma.8205.1.S1_at	AB000168.1	glycinin	-	4e-3	At1g08340	rac GTPase activating protein, putative	O.I.	C.G.	H.G.	Please select
279.7	100.0	153.7	Gma.1490.1.S1_at	AB000097.1	class III acidic endochitinase	-	6e-1	At5g24090	acidic endochitinase (CHIB1)	O.I.	C.G.	H.G.	Please select
279.4	100.0	21.7	GmaAffx.12935.1.S1_at	BE823478	-	-	1e+0	At5g17060	ATARFB1B	O.I.	C.G.	H.G.	Please select
279.4	100.0	0.4	Gma.16477.1.S1_at	BE824134	-	-	3e-1	At2g42680	MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)	O.I.	C.G.	H.G.	Please select
275.8	100.0	0.1	GmaAffx.80347.1.S1_at	AW568683	-	-	3e+0	At5g60130	transcriptional factor B3 family protein	O.I.	C.G.	H.G.	Please select
275.6	100.0	48.2	Gma.17939.1.S1_at	BE823649	-	-	1e+0	At2g39510	nodulin MtN21 family protein	O.I.	C.G.	H.G.	Please select
275.3	100.0	0.4	GmaAffx.57678.1.S1_at	AW099836	-	-	4e-13	At1g51630	unknown protein	O.I.	C.G.	H.G.	Please select
273.7	100.0	261.7	Gma.16043.1.S1_at	BE657403	-	-	2e+0	At2g38130	ATMAK3	O.I.	C.G.	H.G.	Please select
273.3	100.0	2.3	GmaAffx.87290.1.S1_at	BU761834	granule bound starch synthase Ia	-	1e-28	At1g32900	starch synthase, putative	O.I.	C.G.	H.G.	Please select
272.9	100.0	258.6	Gma.18051.1.S1_at	BE819850	Soybean Bowman-Birk proteinase inhibitor /// Bowman-Birk proteinase inhibitor /// Bowman-Birk proteinase inhibitor /// Bowman-Birk protease inhibitor	-	3e-1	At2g42975	unknown protein	O.I.	C.G.	H.G.	Please select
272.9	100.0	3.1	Gma.17321.1.S1_at	AW508844	-	-	6e-12	At5g53970	aminotransferase, putative	O.I.	C.G.	H.G.	Please select
271.5	100.0	1.3	GmaAffx.21169.2.S1_at	AW508360	-	-	6e-2	At1g18650	PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)	O.I.	C.G.	H.G.	Please select
269.8	100.0	224.6	Gma.1841.1.S1_a_at	BE658190	-	-	8e-5	At1g73190	TIP3	O.I.	C.G.	H.G.	Please select
269.7	100.0	0.3	GmaAffx.34780.1.S1_at	AW509030	-	-	8e-1	At2g20453	unknown protein	O.I.	C.G.	H.G.	Please select
269.3	100.0	1.6	GmaAffx.12933.1.S1_at	AW395787	-	-	8e-1	At1g68300	universal stress protein (USP) family protein	O.I.	C.G.	H.G.	Please select
268.5	100.0	281.6	Gma.1862.1.S1_at	J03211.1	lipoxygenase-2	-	1e-4	At1g55020	LOX1	O.I.	C.G.	H.G.	Please select
267.9	100.0	318.8	Gma.15534.1.S1_at	U50081.1	lipoxygenase-3	-	4e-13	At1g55020	LOX1	O.I.	C.G.	H.G.	Please select
267.1	100.0	1.9	GmaAffx.7345.2.S1_at	AW507690	-	-	4e+0	At3g01690	-	O.I.	C.G.	H.G.	Please select
265.1	100.0	134.1	Gma.918.1.S1_at	BE823317	-	-	4e-6	At1g01620	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)	O.I.	C.G.	H.G.	Please select
259.2	100.0	155.1	Gma.1889.1.S1_x_at	BI095016	-	-	3e-8	At4g25140	OLEO1 (OLEOSIN 1)	O.I.	C.G.	H.G.	Please select
259.1	100.0	249.5	Gma.1812.1.S1_at	X02626.1	glycinin A5A4B3 /// A5A4B3 subunits precursor (aa -23 to 539)	-	7e-2	At1g21910	AP2 domain-containing transcription factor family protein	O.I.	C.G.	H.G.	Please select
255.8	100.0	187.8	Gma.15.1.S1_at	U66316.1	desiccation protective protein LEA5	-	5e+0	At5g59080	unknown protein	O.I.	C.G.	H.G.	Please select
253.4	100.0	17.4	GmaAffx.55917.1.S1_at	BE657290	-	-	1e+0	At5g24900	CYP714A2	O.I.	C.G.	H.G.	Please select
253.2	100.0	377.6	Gma.10770.1.S1_at	BE822993	-	-	2e+0	At2g19760	PRF1 (PROFILIN 1)	O.I.	C.G.	H.G.	Please select
251.1	100.0	60.0	GmaAffx.29956.1.S1_s_at	AW101262	-	-	8e-1	At5g44430	PDF1.2c (plant defensin 1.2c)	O.I.	C.G.	H.G.	Please select
250.0	100.0	0.5	GmaAffx.29150.1.S1_at	BU764137	-	-	9e-1	At4g29100	ethylene-responsive family protein	O.I.	C.G.	H.G.	Please select
249.0	100.0	10.2	Gma.871.1.S1_at	BE658253	-	-	2e-2	At5g50700	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	C.G.	H.G.	Please select
246.1	100.0	144.7	Gma.953.1.S1_at	BE823997	-	-	6e+0	At5g40700	unknown protein	O.I.	C.G.	H.G.	Please select
246.0	100.0	112.4	Gma.1889.1.S1_at	BI095016	-	-	3e-8	At4g25140	OLEO1 (OLEOSIN 1)	O.I.	C.G.	H.G.	Please select
245.9	100.0	2.9	Gma.146.1.S1_at	U59626.1	LEA protein	-	4e+0	At5g46350	WRKY8	O.I.	C.G.	H.G.	Please select
244.2	100.0	128.6	Gma.8486.1.S1_s_at	AF191299.1	Sucrose binding protein homolog S-64 (SBP)	-	9e-1	At3g60540	sec61beta family protein	O.I.	C.G.	H.G.	Please select
243.3	100.0	157.9	Gma.1872.1.S1_at	L06038.1	-	-	2e-1	At5g27247	unknown protein	O.I.	C.G.	H.G.	Please select
240.5	100.0	0.2	GmaAffx.80450.1.S1_at	AW705448	-	-	3e+0	At4g09500	glycosyltransferase family protein	O.I.	C.G.	H.G.	Please select
240.0	100.0	1.1	Gma.1023.1.S1_at	BE660535	hydrophobic seed protein precursor	-	4e-4	At2g20030	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
239.8	100.0	58.0	GmaAffx.50725.1.S1_at	BE823727	-	-	6e+0	At5g40710	zinc finger (C2H2 type) family protein	O.I.	C.G.	H.G.	Please select
239.4	100.0	0.1	GmaAffx.60085.1.S1_at	BM309380	-	-	3e-1	At1g17620	-	O.I.	C.G.	H.G.	Please select
236.7	100.0	12.4	Gma.6632.2.S1_at	AW395810	-	-	1e-17	At2g20770	GCL2 (GCR2-LIKE 2)	O.I.	C.G.	H.G.	Please select
236.0	100.0	7.8	GmaAffx.69969.1.S1_at	BU760782	-	-	4e-9	At5g66780	unknown protein	O.I.	C.G.	H.G.	Please select
235.8	100.0	0.6	GmaAffx.18827.1.S1_at	BM528858	-	-	5e-27	At3g03910	GDH3 (GLUTAMATE DEHYDROGENASE 3)	O.I.	C.G.	H.G.	Please select
235.7	100.0	15.1	GmaAffx.35493.1.S1_at	BF595970	-	-	4e-2	At4g17670	senescence-associated protein-related	O.I.	C.G.	H.G.	Please select
232.8	100.0	73.3	GmaAffx.8078.1.S1_at	AW508044	-	-	3e+0	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	O.I.	C.G.	H.G.	Please select
229.9	100.0	0.3	GmaAffx.41891.1.S1_at	BM525195	-	-	1e-8	At3g51860	CAX3 (CATION EXCHANGER 3)	O.I.	C.G.	H.G.	Please select
229.1	100.0	8.1	GmaAffx.85293.1.S1_at	BE190863	-	-	5e-10	At1g52770	phototropic-responsive NPH3 family protein	O.I.	C.G.	H.G.	Please select
228.9	100.0	127.0	GmaAffx.86588.1.S1_at	BE824280	-	-	2e+0	At1g62500	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
228.4	100.0	8.3	Gma.16703.2.S1_a_at	BM886765	-	-	5e-10	At2g37770	aldo/keto reductase family protein	O.I.	C.G.	H.G.	Please select
227.8	100.0	188.1	Gma.434.1.S1_a_at	AF167986.1	cysteine proteinase	-	5e-5	At3g54940	-	O.I.	C.G.	H.G.	Please select
227.8	100.0	1.1	GmaAffx.87080.1.S1_at	BM086563	-	-	2e-7	At2g16430	PAP10 (PURPLE ACID PHOSPHATASE 10)	O.I.	C.G.	H.G.	Please select
225.1	100.0	337.2	Gma.2912.1.S1_at	AF117884.1	seed maturation protein PM30	-	1e+0	At4g39460	SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1)	O.I.	C.G.	H.G.	Please select
224.9	100.0	294.7	Gma.13030.3.S1_at	BI094850	-	-	2e+0	At1g20405	unknown protein	O.I.	C.G.	H.G.	Please select
224.2	100.0	11.8	GmaAffx.73695.1.S1_at	AW471773	-	-	6e-9	At3g24650	ABI3 (ABA INSENSITIVE 3)	O.I.	C.G.	H.G.	Please select
222.1	100.0	233.3	Gma.1870.1.S1_s_at	U11260.1	Bowman-Birk protease inhibitor	-	2e+0	At3g55672	-	O.I.	C.G.	H.G.	Please select
221.5	100.0	0.8	Gma.6507.2.S1_at	BI973509	-	-	2e-15	At5g09510	40S ribosomal protein S15 (RPS15D)	O.I.	C.G.	H.G.	Please select
220.6	100.0	120.0	Gma.909.1.S1_at	AF010186.1	metallothionein-II protein	-	4e+0	At4g25330	unknown protein	O.I.	C.G.	H.G.	Please select
220.0	100.0	146.9	Gma.6921.1.S1_at	BE823209	-	-	4e-4	At1g18100	E12A11	O.I.	C.G.	H.G.	Please select
219.5	100.0	19.1	Gma.10579.1.S1_at	BE822946	Clone se2.11d12 CCAAT-box binding factor HAP3 B domain	-	3e-36	At5g47670	NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)	O.I.	C.G.	H.G.	Please select

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