Microarray experiments to specifically-expressed genes

GSM ID	GSM299456
Assay name	C_i_rep1
GSE experiment	GSE11857: Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
73.5	100.0	8.5	1608538_at	CA813555	-	-	4e+0	At4g34720	AVA-P1	O.I.	C.G.	H.G.	Please select
67.5	100.0	27.1	1611385_at	CF206354.1	-	-	1e+1	At3g02540	RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)	O.I.	C.G.	H.G.	Please select
67.4	100.0	164.0	1610850_at	S63225.1	hypothetical LOC100253166	-	6e-1	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
67.1	100.0	154.7	1609696_x_at	S63225.1	hypothetical LOC100253166	-	6e-1	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
63.6	100.0	7.5	1615581_at	CB973651	-	-	1e+0	At1g29540	unknown protein	O.I.	C.G.	H.G.	Please select
63.5	100.0	263.1	1620964_s_at	S63225.1	stilbene synthase /// stilbene synthase /// hypothetical protein LOC100252908 /// hypothetical LOC100253166 /// resveratrol synthase	-	6e-1	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
61.6	100.0	10.8	1613344_at	CF202628.1	-	-	4e+0	At5g17650	glycine/proline-rich protein	O.I.	C.G.	H.G.	Please select
60.7	100.0	3.6	1612722_at	CF372454	hypothetical protein LOC100264158	-	2e+0	At4g18100	60S ribosomal protein L32 (RPL32A)	O.I.	C.G.	H.G.	Please select
60.0	100.0	16.9	1618568_s_at	CF205010.1	hypothetical protein LOC100251668	-	1e+0	At1g16590	REV7	O.I.	C.G.	H.G.	Please select
58.5	100.0	73.0	1609697_at	CF207058.1	Stilbene synthase 4	-	6e-6	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
53.8	100.0	91.7	1611190_s_at	AF274281.1	stilbene synthase /// stilbene synthase /// hypothetical protein LOC100252908 /// resveratrol synthase	-	2e+0	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
51.7	100.0	12.3	1622638_x_at	X76892.1	hypothetical protein LOC100254891 /// similar to Stilbene synthase 2 /// stilbene synthase 2	-	2e-4	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
51.4	100.0	9.1	1612804_at	X76892.1	hypothetical protein LOC100254891 /// similar to Stilbene synthase 2 /// stilbene synthase 2	-	2e-4	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
49.7	100.0	13.1	1619208_at	CA814525	hypothetical protein LOC100248930	-	6e+0	At5g48950	thioesterase family protein	O.I.	C.G.	H.G.	Please select
47.7	100.0	13.2	1607058_at	CF372471	hypothetical protein LOC100251716	-	7e-5	At2g46110	KPHMT1 (KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1)	O.I.	C.G.	H.G.	Please select
44.7	100.0	1.6	1617232_at	CD799431	-	-	8e-5	At4g10265	wound-responsive protein, putative	O.I.	C.G.	H.G.	Please select
43.7	100.0	2.5	1620342_at	CF207053.1	O-methyltransferase-like	-	3e-5	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	O.I.	C.G.	H.G.	Please select
43.6	100.0	0.1	1608866_at	CF414105	-	-	2e-1	At4g20350	unknown protein	O.I.	C.G.	H.G.	Please select
42.7	100.0	11.3	1609218_at	BM437324	-	-	3e-1	At4g40030	histone H3.2	O.I.	C.G.	H.G.	Please select
40.0	100.0	46.8	1610704_at	CA809376	hypothetical protein LOC100246525	-	3e-2	At2g18120	SRS4 (SHI-RELATED SEQUENCE 4)	O.I.	C.G.	H.G.	Please select
39.2	100.0	1.2	1609330_at	AY156048.1	glutathione S-transferase	-	7e-6	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	O.I.	C.G.	H.G.	Please select
38.9	100.0	80.7	1610824_s_at	AY059639.1	stilbene synthase /// hypothetical protein LOC100254891 /// similar to Stilbene synthase 2 /// stilbene synthase 2	-	2e-4	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
38.1	100.0	0.0	1619710_at	BM436446	-	-	2e-9	At1g58170	disease resistance-responsive protein-related / dirigent protein-related	O.I.	C.G.	H.G.	Please select
37.4	100.0	0.1	1607431_at	CD799386	-	-	3e+0	At5g61200	-	O.I.	C.G.	H.G.	Please select
37.3	100.0	206.6	1608009_s_at	S63221.1	hypothetical protein LOC100254891 /// similar to Stilbene synthase 2 /// stilbene synthase 2	-	7e-1	At1g30300	unknown protein	O.I.	C.G.	H.G.	Please select
37.1	100.0	3.4	1610363_at	CB979583	hypothetical protein LOC100267452	-	9e-32	At3g62150	PGP21 (P-GLYCOPROTEIN 21)	O.I.	C.G.	H.G.	Please select
37.0	100.0	0.8	1607475_s_at	CD012393	O-methyltransferase-like	-	6e-6	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	O.I.	C.G.	H.G.	Please select
36.9	100.0	21.6	1609744_at	CF203760.1	hypothetical protein LOC100240811 /// hypothetical protein LOC100263073	-	2e+0	At3g42630	pentatricopeptide (PPR) repeat-containing protein	O.I.	C.G.	H.G.	Please select
35.9	100.0	2.7	1619475_a_at	BQ792147	hypothetical protein LOC100247673	-	7e-2	At5g64816	unknown protein	O.I.	C.G.	H.G.	Please select
35.4	100.0	3.6	1622670_s_at	CF207059.1	hypothetical protein LOC100242012	-	1e+1	At5g05590	PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2)	O.I.	C.G.	H.G.	Please select
34.5	100.0	28.1	1614141_at	CA817693	hypothetical protein LOC100265131	-	1e-9	At2g31090	unknown protein	O.I.	C.G.	H.G.	Please select
33.8	100.0	1.0	1616445_at	CD716014	hypothetical protein LOC100262839	-	1e+0	At5g67060	HEC1 (HECATE 1)	O.I.	C.G.	H.G.	Please select
33.6	100.0	6.7	1609397_at	CF512090	hypothetical protein LOC100248717	-	1e-35	At5g64300	ATGCH	O.I.	C.G.	H.G.	Please select
33.0	100.0	5.5	1617355_at	CF604658	hypothetical protein LOC100251716	-	9e-23	At3g61530	PANB2	O.I.	C.G.	H.G.	Please select
32.5	100.0	8.4	1617192_at	AY137377.1	class IV chitinase	-	4e-2	At2g43570	chitinase, putative	O.I.	C.G.	H.G.	Please select
32.3	100.0	0.5	1615345_at	CA818702	-	-	3e-2	At3g22240	unknown protein	O.I.	C.G.	H.G.	Please select
31.0	100.0	2.0	1609372_at	BQ797527	hypothetical protein LOC100258305	-	2e+0	At1g67800	copine-related	O.I.	C.G.	H.G.	Please select
30.9	100.0	320.4	1610011_s_at	CF200913.1	-	-	6e+0	At1g44478	-	O.I.	C.G.	H.G.	Please select
30.5	100.0	61.9	1610600_at	CA813949	hypothetical protein LOC100242774 /// hypothetical protein LOC100248732 /// hypothetical protein LOC100253829	-	3e-1	At3g08580	AAC1 (ADP/ATP CARRIER 1)	O.I.	C.G.	H.G.	Please select
30.0	100.0	0.0	1606750_at	AY059638.1	-	-	9e-1	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	C.G.	H.G.	Please select
29.3	100.0	9.6	1610775_s_at	CF206474.1	hypothetical protein LOC100254080	-	3e-6	At5g13080	WRKY75	O.I.	C.G.	H.G.	Please select
28.4	100.0	0.1	1617596_at	CF201215.1	hypothetical protein LOC100264999	-	1e+0	At4g32590	ferredoxin-related	O.I.	C.G.	H.G.	Please select
28.0	100.0	2.4	1616303_a_at	CF212684	hypothetical protein LOC100241801	-	8e-12	At1g28960	ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)	O.I.	C.G.	H.G.	Please select
27.8	100.0	0.3	1622064_at	CF606041	R2R3 Myb14 transcription factor	-	6e-1	At1g50220	unknown protein	O.I.	C.G.	H.G.	Please select
27.6	100.0	1.2	1622381_s_at	BQ800211	-	-	2e+0	At2g31180	MYB14 (MYB DOMAIN PROTEIN 14)	O.I.	C.G.	H.G.	Please select
27.5	100.0	0.0	1618355_at	CB837772	-	-	1e+0	At2g16750	protein kinase family protein	O.I.	C.G.	H.G.	Please select
25.8	100.0	2.8	1615458_at	CB969727	hypothetical protein LOC100255664	-	2e+0	At5g16490	RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)	O.I.	C.G.	H.G.	Please select
25.8	100.0	1.6	1616037_at	BQ800290	-	-	7e+0	At5g09370	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
25.6	100.0	0.1	1620018_at	CF203824.1	-	-	2e+0	At5g44568	unknown protein	O.I.	C.G.	H.G.	Please select
24.9	100.0	0.3	1615774_at	CF372630	-	-	2e+0	At2g21045	-	O.I.	C.G.	H.G.	Please select
24.9	100.0	0.2	1612025_at	BQ794449	-	-	1e+0	At5g27020	unknown protein	O.I.	C.G.	H.G.	Please select
24.7	100.0	0.5	1610800_at	CF204250.1	-	-	2e+0	At2g35370	GDCH	O.I.	C.G.	H.G.	Please select
24.1	100.0	0.3	1618260_s_at	CD799434	hypothetical protein LOC100254518	-	3e-1	At1g73830	BEE3 (BR ENHANCED EXPRESSION 3)	O.I.	C.G.	H.G.	Please select
24.0	100.0	0.7	1617269_at	CF514131	hypothetical protein LOC100266306	-	4e-1	At2g37870	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
23.8	100.0	3.1	1615638_at	CD797342	hypothetical protein LOC100258293	-	2e-2	At3g09220	LAC7 (laccase 7)	O.I.	C.G.	H.G.	Please select
23.4	100.0	0.4	1611117_at	CF201368.1	-	-	1e-1	At1g58170	disease resistance-responsive protein-related / dirigent protein-related	O.I.	C.G.	H.G.	Please select
23.2	100.0	35.9	1613603_at	CF211665	hypothetical protein LOC100248706	-	1e-7	At1g47670	amino acid transporter family protein	O.I.	C.G.	H.G.	Please select
22.7	100.0	78.2	AFFX-Vvi-gapdh-3_c1_at		-	-	0			O.I.	C.G.	H.G.	Please select
22.6	100.0	3.7	1609985_at	CF403736	hypothetical protein LOC100255189	-	2e-121	At1g60810	ACLA-2	O.I.	C.G.	H.G.	Please select
22.6	100.0	0.1	1617100_at	BQ794198	-	-	2e-2	At2g29460	ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)	O.I.	C.G.	H.G.	Please select
22.5	100.0	78.9	AFFX-Vvi-gapdh-M_at		-	-	0			O.I.	C.G.	H.G.	Please select
22.3	100.0	0.6	1610639_at	CF206618.1	-	-	8e-33	At3g54660	GR (GLUTATHIONE REDUCTASE)	O.I.	C.G.	H.G.	Please select
21.9	100.0	71.6	AFFX-Vvi-gapdh-3_c4_at		-	-	0			O.I.	C.G.	H.G.	Please select
21.7	100.0	16.1	1614502_at	CF213530	hypothetical protein LOC100267863	-	2e-19	At4g36220	FAH1 (FERULIC ACID 5-HYDROXYLASE 1)	O.I.	C.G.	H.G.	Please select
21.7	100.0	0.4	1611445_at	BQ796039	hypothetical protein LOC100246742	-	1e+0	At3g48070	protein binding / zinc ion binding	O.I.	C.G.	H.G.	Please select
21.5	100.0	56.1	1615814_at	CB920915	hypothetical protein LOC100264789	-	0	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	C.G.	H.G.	Please select
21.5	100.0	19.7	1609984_at	CB343408	hypothetical protein LOC100262346	-	1e+0	At4g15093	catalytic LigB subunit of aromatic ring-opening dioxygenase family	O.I.	C.G.	H.G.	Please select
21.3	99.9	0.0	1618736_at	CB920638	hypothetical protein LOC100266614	-	2e-5	At2g02360	AtPP2-B10 (Phloem protein 2-B10)	O.I.	C.G.	H.G.	Please select
21.1	99.9	69.2	AFFX-Vvi-gapdh-3_c5_at		-	-	0			O.I.	C.G.	H.G.	Please select
21.1	99.9	64.7	AFFX-Vvi-gapdh-3_c3_at		-	-	0			O.I.	C.G.	H.G.	Please select
21.0	99.9	2.0	1616048_at	CF208477	hypothetical protein LOC100255931	-	1e+0	At4g14530	-	O.I.	C.G.	H.G.	Please select
21.0	99.9	0.2	1621937_at	CK138151.1	hypothetical protein LOC100245655	-	2e-1	At4g02810	unknown protein	O.I.	C.G.	H.G.	Please select
20.8	99.9	89.9	AFFX-Vvi-gapdh-3_at		-	-	0			O.I.	C.G.	H.G.	Please select
20.8	99.9	2.8	1608260_at	CA818640	hypothetical protein LOC100251558	-	3e-2	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.	Please select
20.8	99.9	1.5	1617483_at	CD799044	hypothetical protein LOC100267019	-	1e+0	At2g04170	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	C.G.	H.G.	Please select
20.6	99.9	10.0	1607127_s_at	CA809554	hypothetical protein LOC100259201	-	2e+0	At3g04545	-	O.I.	C.G.	H.G.	Please select
20.5	99.9	73.9	AFFX-Vvi-gapdh-3_c2_at		-	-	0			O.I.	C.G.	H.G.	Please select
20.3	99.9	25.2	AFFX-Vvi-gapdh-5_at		-	-	0			O.I.	C.G.	H.G.	Please select
20.1	99.9	0.1	1621580_at	CB974796	-	-	3e-5	At1g48860	3-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putative	O.I.	C.G.	H.G.	Please select
19.8	99.9	1.7	1622455_at	CF207039.1	-	-	4e-1	At1g65230	unknown protein	O.I.	C.G.	H.G.	Please select
19.7	99.9	53.5	AFFX-Vvi-gapdh-3_c8_at		-	-	0			O.I.	C.G.	H.G.	Please select
19.7	99.9	22.2	1622868_at	BQ793856	hypothetical protein LOC100258537	-	1e-3	At4g10265	wound-responsive protein, putative	O.I.	C.G.	H.G.	Please select
19.5	99.9	47.0	AFFX-Vvi-gapdh-3_c7_at		-	-	0			O.I.	C.G.	H.G.	Please select
19.3	99.9	4.6	1610920_at	CB979986	hypothetical protein LOC100257224	-	7e-14	At4g36910	LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2)	O.I.	C.G.	H.G.	Please select
19.0	99.9	46.3	1621244_s_at	CD797552	hypothetical protein LOC100246875	-	2e-5	At3g03980	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	C.G.	H.G.	Please select
18.9	99.9	58.7	AFFX-Vvi-gapdh-3_c6_at		-	-	0			O.I.	C.G.	H.G.	Please select
18.9	99.9	5.4	1614975_at	CD799759	hypothetical protein LOC100264828	-	2e-1	At5g14440	-	O.I.	C.G.	H.G.	Please select
18.9	99.9	1.1	1618663_s_at	BM436446	hypothetical protein LOC100263839	-	2e-9	At1g58170	disease resistance-responsive protein-related / dirigent protein-related	O.I.	C.G.	H.G.	Please select
18.3	99.9	1.9	1613301_at	CF372159	hypothetical protein LOC100261977	-	1e-12	At3g15450	unknown protein	O.I.	C.G.	H.G.	Please select
18.2	99.9	42.8	1613339_at	AF305093.1	polygalacturonase inhibiting protein	-	6e-4	At5g06860	PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1)	O.I.	C.G.	H.G.	Please select
18.1	99.9	1.4	1622395_s_at	CF514131	hypothetical protein LOC100266306	-	4e-1	At2g37870	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
17.9	99.9	23.6	1620425_at	CF414994	hypothetical protein LOC100260808	-	3e-10	At2g17850	-	O.I.	C.G.	H.G.	Please select
17.9	99.9	1.7	1619698_at	CA816208	hypothetical protein LOC100251545 /// hypothetical LOC100246402 /// hypothetical protein LOC100250593 /// hypothetical LOC100256674	-	1e+0	At1g52720	unknown protein	O.I.	C.G.	H.G.	Please select
17.9	99.9	0.6	1614910_at	CF604623	hypothetical protein LOC100262364	-	6e+0	At5g48580	FKBP15-2	O.I.	C.G.	H.G.	Please select
17.9	99.9	0.4	1613871_at	CF207387	hypothetical protein LOC100256098	-	8e-6	At3g54420	ATEP3	O.I.	C.G.	H.G.	Please select
17.7	99.9	0.0	1619437_at	CF405971	-	-	2e-1	At3g28130	nodulin MtN21 family protein	O.I.	C.G.	H.G.	Please select
17.5	99.9	58.0	1606429_at	CF373019	hypothetical protein LOC100251832	-	2e-1	At4g12390	PME1 (PECTIN METHYLESTERASE INHIBITOR 1)	O.I.	C.G.	H.G.	Please select
17.3	99.9	0.3	1620192_at	CA818412	-	-	4e+0	At5g17120	-	O.I.	C.G.	H.G.	Please select
17.2	99.9	2.3	1607146_at	CK138255.1	hypothetical LOC100266416	-	8e-2	At1g13550	unknown protein	O.I.	C.G.	H.G.	Please select
16.8	99.9	14.2	1620319_s_at	CF205531.1	R2R3 Myb14 transcription factor	-	9e-2	At4g11660	AT-HSFB2B	O.I.	C.G.	H.G.	Please select

Back to the CoP portal site

Back to the KAGIANA project homepage