CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM299327

Assay name pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6

GSE experiment GSE11852: Effect of uniconazole on wt and pkl mutant germinating seeds

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
110.5 99.9 116.4 At4g21490 828234 NDB3 F:NADH dehydrogenase activity;P:unknown;C:unknown;BOFPAM O.I. C.G. H.G.
98.3 99.9 23.0 At1g65340 842842 CYP96A3 member of CYP96A O.I. C.G. H.G.
92.7 99.9 116.6 At5g13870 831233 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) EXGT-A4, endoxyloglucan transferase, O.I. C.G. H.G.
85.1 99.9 53.2 At5g27410 832800 aminotransferase class IV family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM O.I. C.G. H.G.
74.0 99.9 78.6 At1g60090 842304 BGLU4 (BETA GLUCOSIDASE 4) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
61.5 99.8 72.7 At5g59130 836031 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
59.2 99.8 123.4 At1g33790 840271 jacalin lectin family protein F:unknown;P:biological_process unknown;C:chloroplast;PO O.I. C.G. H.G.
56.6 99.8 51.3 At3g48700 824031 ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13) F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV O.I. C.G. H.G.
54.7 99.8 287.3 At5g05290 830411 ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
50.2 99.8 159.3 At1g64970 842805 G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves O.I. C.G. H.G.
47.7 99.8 237.3 At4g12910 826903 scpl20 (serine carboxypeptidase-like 20) F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB O.I. C.G. H.G.
43.8 99.8 305.7 At4g36880 829841 CP1 (CYSTEINE PROTEINASE1) F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis, response to gibberellin stimulus, response to red light;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
41.6 99.8 73.3 At3g23800 821962 SBP3 (selenium-binding protein 3) F:selenium binding;P:unknown;C:cellular_component unknown;OMBPA O.I. C.G. H.G.
41.6 99.8 47.7 At2g34020 817963 calcium ion binding F:calcium ion binding;P:biological_process unknown;C:unknown;POMBF O.I. C.G. H.G.
41.4 99.8 29.1 At2g03590 814888 ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1) Encodes a member of a class of allantoin transporters. O.I. C.G. H.G.
41.2 99.8 241.9 At3g45310 823669 cysteine proteinase, putative F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAF O.I. C.G. H.G.
41.1 99.8 19.4 At5g17490 831615 RGL3 (RGA-LIKE PROTEIN 3) DELLA subfamily member involved in GA signal transduction O.I. C.G. H.G.
40.1 99.8 17.1 At1g72570 843589 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POBV O.I. C.G. H.G.
39.9 99.8 25.9 At1g80340 844374 GA3OX2 (GIBBERELLIN 3-OXIDASE 2) Encodes a protein with gibberellin 3 β-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20. O.I. C.G. H.G.
35.0 99.7 85.6 At5g19520 832072 MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9) F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV O.I. C.G. H.G.
34.9 99.7 210.0 At1g02640 837940 BXL2 (BETA-XYLOSIDASE 2) encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. O.I. C.G. H.G.
33.9 99.7 133.3 At4g16210 827314 ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A) F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPA O.I. C.G. H.G.
33.3 99.7 79.7 At5g63810 836501 BGAL10 (beta-galactosidase 10) member of Glycoside Hydrolase Family 35 O.I. C.G. H.G.
33.0 99.7 210.8 At5g14450 831296 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:plant-type cell wall;PBFOM O.I. C.G. H.G.
32.6 99.7 163.9 At2g47780 819390 rubber elongation factor (REF) protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
32.0 99.7 271.3 At3g06860 819870 MFP2 (MULTIFUNCTIONAL PROTEIN 2) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes. O.I. C.G. H.G.
31.9 99.7 102.2 At2g24280 816963 serine carboxypeptidase S28 family protein F:serine-type peptidase activity, serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system, lysosome;MOFPB O.I. C.G. H.G.
30.6 99.7 203.5 At1g73120 843643 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:unknown;P O.I. C.G. H.G.
29.7 99.7 110.7 At1g17020 838272 SRG1 (SENESCENCE-RELATED GENE 1) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. O.I. C.G. H.G.
29.6 99.7 219.6 At2g22780 816808 PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA. O.I. C.G. H.G.
29.6 99.7 30.4 At1g48660 841288 auxin-responsive GH3 family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;OPBMF O.I. C.G. H.G.
29.3 99.7 178.5 At4g30810 829204 scpl29 (serine carboxypeptidase-like 29) F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB O.I. C.G. H.G.
29.3 99.7 27.2 At4g38210 829977 ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20) expansin -like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
29.2 99.7 78.2 At5g14570 831308 ATNRT2.7 (Arabidopsis thaliana high affinity nitrate transporter 2.7) Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane. O.I. C.G. H.G.
29.2 99.7 29.6 At1g71960 843527 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV O.I. C.G. H.G.
28.8 99.7 21.8 At2g40220 818614 ABI4 (ABA INSENSITIVE 4) encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Expressed most abundantly in developing siliques and to a lesser degree in seedlings. O.I. C.G. H.G.
28.6 99.7 208.9 At2g42790 818879 CSY3 (citrate synthase 3) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development. O.I. C.G. H.G.
28.2 99.7 52.0 At3g05190 819683 aminotransferase class IV family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM O.I. C.G. H.G.
26.8 99.7 35.7 At5g45920 834632 carboxylesterase/ hydrolase/ hydrolase, acting on ester bonds F:hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;FPBMO O.I. C.G. H.G.
26.5 99.7 28.5 At3g09520 820109 ATEXO70H4 (exocyst subunit EXO70 family protein H4) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
26.5 99.7 27.2 At2g32560 817817 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
26.1 99.7 97.9 At5g02260 831736 ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
26.0 99.7 121.3 At1g29090 839784 peptidase C1A papain family protein F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
25.2 99.6 278.9 At5g03860 831690 MLS (MALATE SYNTHASE) Encodes a protein with malate synthase activity. O.I. C.G. H.G.
25.0 99.6 51.8 At2g46740 819287 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMA O.I. C.G. H.G.
23.7 99.6 251.5 At5g42890 834300 SCP2 (STEROL CARRIER PROTEIN 2) F:sterol carrier activity, oxidoreductase activity;P:glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination;C:peroxisome;MFOPB O.I. C.G. H.G.
23.5 99.6 65.0 At3g24240 822011 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
23.2 99.6 88.4 At2g19590 816478 ACO1 (ACC OXIDASE 1) encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase O.I. C.G. H.G.
23.2 99.6 23.6 At2g34080 817969 cysteine proteinase, putative F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
22.7 99.6 40.6 At2g46950 819309 CYP709B2 member of CYP709B O.I. C.G. H.G.
21.9 99.6 133.3 At5g56260 835725 dimethylmenaquinone methyltransferase family protein F:ribonuclease inhibitor activity;P:regulation of RNA metabolic process;C:cellular_component unknown;BOPAFM O.I. C.G. H.G.
21.9 99.6 28.2 At1g76500 843983 SOB3 (SUPPRESSOR OF PHYB-4#3) Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light O.I. C.G. H.G.
21.8 99.6 48.2 At2g22840 816815 AtGRF1 (GROWTH-REGULATING FACTOR 1) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower O.I. C.G. H.G.
21.4 99.6 5.3 At5g03310 831879 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. C.G. H.G.
21.1 99.6 36.3 At3g59140 825083 ATMRP14 member of MRP subfamily O.I. C.G. H.G.
20.9 99.6 111.8 At3g20210 821565 DELTA-VPE Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat. O.I. C.G. H.G.
20.9 99.6 40.6 At5g24130 832478 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PM O.I. C.G. H.G.
20.6 99.6 122.9 At5g66920 836826 sks17 (SKU5 Similar 17) F:oxidoreductase activity, copper ion binding;P:unknown;C:cell wall, plant-type cell wall;FBPMOA O.I. C.G. H.G.
20.6 99.6 37.8 At4g19230 827663 CYP707A1 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy. O.I. C.G. H.G.
20.4 99.6 32.6 At5g05890 830474 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
20.2 99.6 91.8 At1g78060 844141 glycosyl hydrolase family 3 protein F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:apoplast, cell wall, chloroplast, plant-type cell wall;BOFPAM O.I. C.G. H.G.
20.2 99.6 34.0 At3g23790 821961 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:chloroplast envelope;BOMFPAV O.I. C.G. H.G.
19.9 99.6 163.7 At3g61070 825279 PEX11E member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation. O.I. C.G. H.G.
19.8 99.6 35.0 At5g57390 835845 AIL5 (AINTEGUMENTA-LIKE 5) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations. O.I. C.G. H.G.
19.5 99.6 150.6 At1g68560 843185 XYL1 (ALPHA-XYLOSIDASE 1) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. O.I. C.G. H.G.
19.2 99.6 41.3 At5g58900 836007 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOF O.I. C.G. H.G.
19.2 99.6 28.6 At5g05880 830473 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
19.0 99.5 21.6 At4g15230 827187 PDR2 (PLEIOTROPIC DRUG RESISTANCE 2) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPV O.I. C.G. H.G.
18.8 99.5 19.0 At4g39500 830104 CYP96A11 member of CYP96A O.I. C.G. H.G.
18.2 99.5 122.0 At1g55020 841944 LOX1 lipoxygenase, a defense gene conferring resistance Xanthomonas campestris O.I. C.G. H.G.
18.0 99.5 64.4 At5g20400 832162 oxidoreductase, 2OG-Fe(II) oxygenase family protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. O.I. C.G. H.G.
18.0 99.5 27.9 At4g16230 827317 carboxylesterase/ hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
17.8 99.5 159.6 At5g08260 830722 scpl35 (serine carboxypeptidase-like 35) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
17.6 99.5 189.3 At2g30970 817648 ASP1 (ASPARTATE AMINOTRANSFERASE 1) ASPARTATE AMINOTRANSFERASE 1 O.I. C.G. H.G.
17.6 99.5 59.8 At5g65410 836666 HB25 (HOMEOBOX PROTEIN 25) Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family. O.I. C.G. H.G.
17.6 99.5 20.7 At5g44700 834499 GSO2 (GASSHO 2) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis. O.I. C.G. H.G.
17.6 99.5 15.6 At4g27250 828833 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family F:cinnamyl-alcohol dehydrogenase activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
17.5 99.5 24.6 At2g36080 818181 DNA-binding protein, putative Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity. O.I. C.G. H.G.
17.0 99.5 27.5 At5g06330 830521 hairpin-responsive protein, putative (HIN1) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
16.6 99.5 143.5 At2g02040 814735 PTR2 (PEPTIDE TRANSPORTER 2) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays. O.I. C.G. H.G.
16.6 99.5 111.4 At5g45670 834606 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
16.6 99.5 25.3 At5g67060 836841 HEC1 (HECATE 1) F:transcription factor activity;P:transmitting tissue development, carpel formation, regulation of transcription;C:nucleus;PMBOFA O.I. C.G. H.G.
16.5 99.5 50.3 At5g08370 830735 AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2) F:alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:positive regulation of flower development, leaf morphogenesis;C:plant-type cell wall;MBFOP O.I. C.G. H.G.
16.4 99.5 44.1 At5g10120 830876 ethylene insensitive 3 family protein F:transcription factor activity;P:regulation of transcription;C:nucleus;POM O.I. C.G. H.G.
16.4 99.5 24.3 At3g20120 821555 CYP705A21 member of CYP705A O.I. C.G. H.G.
16.3 99.5 75.2 At5g46180 834660 delta-OAT ornithine delta-aminotransferase O.I. C.G. H.G.
16.3 99.5 23.8 At2g26040 817145 Bet v I allergen family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
16.1 99.5 368.7 At3g21720 821726 ICL (ISOCITRATE LYASE) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL). O.I. C.G. H.G.
15.7 99.5 71.1 At1g43780 840974 scpl44 (serine carboxypeptidase-like 44) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO O.I. C.G. H.G.
15.6 99.5 84.1 At5g46950 834741 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
15.4 99.5 101.5 At2g37640 818341 EXP3 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
15.3 99.4 16.0 At2g29760 817526 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:unknown;C:chloroplast;POMFBVA O.I. C.G. H.G.
14.6 99.4 104.5 At3g21560 821710 UGT84A2 Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). O.I. C.G. H.G.
14.6 99.4 32.5 At1g16390 838209 ATOCT3 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 3) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA O.I. C.G. H.G.
14.5 99.4 182.1 At1g76790 844013 O-methyltransferase family 2 protein F:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFOM O.I. C.G. H.G.
14.5 99.4 121.1 At4g01700 828131 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVF O.I. C.G. H.G.
14.3 99.4 12.3 At1g04920 839382 ATSPS3F (sucrose phosphate synthase 3F) Encodes a protein with putative sucrose-phosphate synthase activity. O.I. C.G. H.G.
14.1 99.4 196.0 At4g32460 829381 - F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PB O.I. C.G. H.G.
14.1 99.4 60.1 At2g04160 814953 AIR3 isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell. O.I. C.G. H.G.
14.1 99.4 48.9 At5g66460 836778 (1-4)-beta-mannan endohydrolase, putative F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
110.5	99.9	116.4	At4g21490	828234	NDB3	F:NADH dehydrogenase activity;P:unknown;C:unknown;BOFPAM	O.I.	C.G.	H.G.
98.3	99.9	23.0	At1g65340	842842	CYP96A3	member of CYP96A	O.I.	C.G.	H.G.
92.7	99.9	116.6	At5g13870	831233	EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)	EXGT-A4, endoxyloglucan transferase,	O.I.	C.G.	H.G.
85.1	99.9	53.2	At5g27410	832800	aminotransferase class IV family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM	O.I.	C.G.	H.G.
74.0	99.9	78.6	At1g60090	842304	BGLU4 (BETA GLUCOSIDASE 4)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
61.5	99.8	72.7	At5g59130	836031	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
59.2	99.8	123.4	At1g33790	840271	jacalin lectin family protein	F:unknown;P:biological_process unknown;C:chloroplast;PO	O.I.	C.G.	H.G.
56.6	99.8	51.3	At3g48700	824031	ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13)	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV	O.I.	C.G.	H.G.
54.7	99.8	287.3	At5g05290	830411	ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)	Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
50.2	99.8	159.3	At1g64970	842805	G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)	gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves	O.I.	C.G.	H.G.
47.7	99.8	237.3	At4g12910	826903	scpl20 (serine carboxypeptidase-like 20)	F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB	O.I.	C.G.	H.G.
43.8	99.8	305.7	At4g36880	829841	CP1 (CYSTEINE PROTEINASE1)	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis, response to gibberellin stimulus, response to red light;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
41.6	99.8	73.3	At3g23800	821962	SBP3 (selenium-binding protein 3)	F:selenium binding;P:unknown;C:cellular_component unknown;OMBPA	O.I.	C.G.	H.G.
41.6	99.8	47.7	At2g34020	817963	calcium ion binding	F:calcium ion binding;P:biological_process unknown;C:unknown;POMBF	O.I.	C.G.	H.G.
41.4	99.8	29.1	At2g03590	814888	ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)	Encodes a member of a class of allantoin transporters.	O.I.	C.G.	H.G.
41.2	99.8	241.9	At3g45310	823669	cysteine proteinase, putative	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAF	O.I.	C.G.	H.G.
41.1	99.8	19.4	At5g17490	831615	RGL3 (RGA-LIKE PROTEIN 3)	DELLA subfamily member involved in GA signal transduction	O.I.	C.G.	H.G.
40.1	99.8	17.1	At1g72570	843589	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POBV	O.I.	C.G.	H.G.
39.9	99.8	25.9	At1g80340	844374	GA3OX2 (GIBBERELLIN 3-OXIDASE 2)	Encodes a protein with gibberellin 3 β-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20.	O.I.	C.G.	H.G.
35.0	99.7	85.6	At5g19520	832072	MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9)	F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV	O.I.	C.G.	H.G.
34.9	99.7	210.0	At1g02640	837940	BXL2 (BETA-XYLOSIDASE 2)	encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.	O.I.	C.G.	H.G.
33.9	99.7	133.3	At4g16210	827314	ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)	F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPA	O.I.	C.G.	H.G.
33.3	99.7	79.7	At5g63810	836501	BGAL10 (beta-galactosidase 10)	member of Glycoside Hydrolase Family 35	O.I.	C.G.	H.G.
33.0	99.7	210.8	At5g14450	831296	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:plant-type cell wall;PBFOM	O.I.	C.G.	H.G.
32.6	99.7	163.9	At2g47780	819390	rubber elongation factor (REF) protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
32.0	99.7	271.3	At3g06860	819870	MFP2 (MULTIFUNCTIONAL PROTEIN 2)	Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.	O.I.	C.G.	H.G.
31.9	99.7	102.2	At2g24280	816963	serine carboxypeptidase S28 family protein	F:serine-type peptidase activity, serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system, lysosome;MOFPB	O.I.	C.G.	H.G.
30.6	99.7	203.5	At1g73120	843643	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:unknown;P	O.I.	C.G.	H.G.
29.7	99.7	110.7	At1g17020	838272	SRG1 (SENESCENCE-RELATED GENE 1)	Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.	O.I.	C.G.	H.G.
29.6	99.7	219.6	At2g22780	816808	PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1)	encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.	O.I.	C.G.	H.G.
29.6	99.7	30.4	At1g48660	841288	auxin-responsive GH3 family protein	F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;OPBMF	O.I.	C.G.	H.G.
29.3	99.7	178.5	At4g30810	829204	scpl29 (serine carboxypeptidase-like 29)	F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB	O.I.	C.G.	H.G.
29.3	99.7	27.2	At4g38210	829977	ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)	expansin -like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
29.2	99.7	78.2	At5g14570	831308	ATNRT2.7 (Arabidopsis thaliana high affinity nitrate transporter 2.7)	Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.	O.I.	C.G.	H.G.
29.2	99.7	29.6	At1g71960	843527	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV	O.I.	C.G.	H.G.
28.8	99.7	21.8	At2g40220	818614	ABI4 (ABA INSENSITIVE 4)	encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.	O.I.	C.G.	H.G.
28.6	99.7	208.9	At2g42790	818879	CSY3 (citrate synthase 3)	Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.	O.I.	C.G.	H.G.
28.2	99.7	52.0	At3g05190	819683	aminotransferase class IV family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM	O.I.	C.G.	H.G.
26.8	99.7	35.7	At5g45920	834632	carboxylesterase/ hydrolase/ hydrolase, acting on ester bonds	F:hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;FPBMO	O.I.	C.G.	H.G.
26.5	99.7	28.5	At3g09520	820109	ATEXO70H4 (exocyst subunit EXO70 family protein H4)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
26.5	99.7	27.2	At2g32560	817817	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
26.1	99.7	97.9	At5g02260	831736	ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
26.0	99.7	121.3	At1g29090	839784	peptidase C1A papain family protein	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
25.2	99.6	278.9	At5g03860	831690	MLS (MALATE SYNTHASE)	Encodes a protein with malate synthase activity.	O.I.	C.G.	H.G.
25.0	99.6	51.8	At2g46740	819287	FAD-binding domain-containing protein	F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMA	O.I.	C.G.	H.G.
23.7	99.6	251.5	At5g42890	834300	SCP2 (STEROL CARRIER PROTEIN 2)	F:sterol carrier activity, oxidoreductase activity;P:glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination;C:peroxisome;MFOPB	O.I.	C.G.	H.G.
23.5	99.6	65.0	At3g24240	822011	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
23.2	99.6	88.4	At2g19590	816478	ACO1 (ACC OXIDASE 1)	encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase	O.I.	C.G.	H.G.
23.2	99.6	23.6	At2g34080	817969	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
22.7	99.6	40.6	At2g46950	819309	CYP709B2	member of CYP709B	O.I.	C.G.	H.G.
21.9	99.6	133.3	At5g56260	835725	dimethylmenaquinone methyltransferase family protein	F:ribonuclease inhibitor activity;P:regulation of RNA metabolic process;C:cellular_component unknown;BOPAFM	O.I.	C.G.	H.G.
21.9	99.6	28.2	At1g76500	843983	SOB3 (SUPPRESSOR OF PHYB-4#3)	Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light	O.I.	C.G.	H.G.
21.8	99.6	48.2	At2g22840	816815	AtGRF1 (GROWTH-REGULATING FACTOR 1)	Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower	O.I.	C.G.	H.G.
21.4	99.6	5.3	At5g03310	831879	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P	O.I.	C.G.	H.G.
21.1	99.6	36.3	At3g59140	825083	ATMRP14	member of MRP subfamily	O.I.	C.G.	H.G.
20.9	99.6	111.8	At3g20210	821565	DELTA-VPE	Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.	O.I.	C.G.	H.G.
20.9	99.6	40.6	At5g24130	832478	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PM	O.I.	C.G.	H.G.
20.6	99.6	122.9	At5g66920	836826	sks17 (SKU5 Similar 17)	F:oxidoreductase activity, copper ion binding;P:unknown;C:cell wall, plant-type cell wall;FBPMOA	O.I.	C.G.	H.G.
20.6	99.6	37.8	At4g19230	827663	CYP707A1	Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.	O.I.	C.G.	H.G.
20.4	99.6	32.6	At5g05890	830474	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
20.2	99.6	91.8	At1g78060	844141	glycosyl hydrolase family 3 protein	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:apoplast, cell wall, chloroplast, plant-type cell wall;BOFPAM	O.I.	C.G.	H.G.
20.2	99.6	34.0	At3g23790	821961	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:chloroplast envelope;BOMFPAV	O.I.	C.G.	H.G.
19.9	99.6	163.7	At3g61070	825279	PEX11E	member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.	O.I.	C.G.	H.G.
19.8	99.6	35.0	At5g57390	835845	AIL5 (AINTEGUMENTA-LIKE 5)	Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.	O.I.	C.G.	H.G.
19.5	99.6	150.6	At1g68560	843185	XYL1 (ALPHA-XYLOSIDASE 1)	Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.	O.I.	C.G.	H.G.
19.2	99.6	41.3	At5g58900	836007	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOF	O.I.	C.G.	H.G.
19.2	99.6	28.6	At5g05880	830473	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
19.0	99.5	21.6	At4g15230	827187	PDR2 (PLEIOTROPIC DRUG RESISTANCE 2)	F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
18.8	99.5	19.0	At4g39500	830104	CYP96A11	member of CYP96A	O.I.	C.G.	H.G.
18.2	99.5	122.0	At1g55020	841944	LOX1	lipoxygenase, a defense gene conferring resistance Xanthomonas campestris	O.I.	C.G.	H.G.
18.0	99.5	64.4	At5g20400	832162	oxidoreductase, 2OG-Fe(II) oxygenase family protein	encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.	O.I.	C.G.	H.G.
18.0	99.5	27.9	At4g16230	827317	carboxylesterase/ hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
17.8	99.5	159.6	At5g08260	830722	scpl35 (serine carboxypeptidase-like 35)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
17.6	99.5	189.3	At2g30970	817648	ASP1 (ASPARTATE AMINOTRANSFERASE 1)	ASPARTATE AMINOTRANSFERASE 1	O.I.	C.G.	H.G.
17.6	99.5	59.8	At5g65410	836666	HB25 (HOMEOBOX PROTEIN 25)	Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.	O.I.	C.G.	H.G.
17.6	99.5	20.7	At5g44700	834499	GSO2 (GASSHO 2)	Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.	O.I.	C.G.	H.G.
17.6	99.5	15.6	At4g27250	828833	dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family	F:cinnamyl-alcohol dehydrogenase activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
17.5	99.5	24.6	At2g36080	818181	DNA-binding protein, putative	Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.	O.I.	C.G.	H.G.
17.0	99.5	27.5	At5g06330	830521	hairpin-responsive protein, putative (HIN1)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
16.6	99.5	143.5	At2g02040	814735	PTR2 (PEPTIDE TRANSPORTER 2)	Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.	O.I.	C.G.	H.G.
16.6	99.5	111.4	At5g45670	834606	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
16.6	99.5	25.3	At5g67060	836841	HEC1 (HECATE 1)	F:transcription factor activity;P:transmitting tissue development, carpel formation, regulation of transcription;C:nucleus;PMBOFA	O.I.	C.G.	H.G.
16.5	99.5	50.3	At5g08370	830735	AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2)	F:alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:positive regulation of flower development, leaf morphogenesis;C:plant-type cell wall;MBFOP	O.I.	C.G.	H.G.
16.4	99.5	44.1	At5g10120	830876	ethylene insensitive 3 family protein	F:transcription factor activity;P:regulation of transcription;C:nucleus;POM	O.I.	C.G.	H.G.
16.4	99.5	24.3	At3g20120	821555	CYP705A21	member of CYP705A	O.I.	C.G.	H.G.
16.3	99.5	75.2	At5g46180	834660	delta-OAT	ornithine delta-aminotransferase	O.I.	C.G.	H.G.
16.3	99.5	23.8	At2g26040	817145	Bet v I allergen family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
16.1	99.5	368.7	At3g21720	821726	ICL (ISOCITRATE LYASE)	Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).	O.I.	C.G.	H.G.
15.7	99.5	71.1	At1g43780	840974	scpl44 (serine carboxypeptidase-like 44)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
15.6	99.5	84.1	At5g46950	834741	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
15.4	99.5	101.5	At2g37640	818341	EXP3	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
15.3	99.4	16.0	At2g29760	817526	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:unknown;C:chloroplast;POMFBVA	O.I.	C.G.	H.G.
14.6	99.4	104.5	At3g21560	821710	UGT84A2	Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid).	O.I.	C.G.	H.G.
14.6	99.4	32.5	At1g16390	838209	ATOCT3 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 3)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA	O.I.	C.G.	H.G.
14.5	99.4	182.1	At1g76790	844013	O-methyltransferase family 2 protein	F:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFOM	O.I.	C.G.	H.G.
14.5	99.4	121.1	At4g01700	828131	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVF	O.I.	C.G.	H.G.
14.3	99.4	12.3	At1g04920	839382	ATSPS3F (sucrose phosphate synthase 3F)	Encodes a protein with putative sucrose-phosphate synthase activity.	O.I.	C.G.	H.G.
14.1	99.4	196.0	At4g32460	829381	-	F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PB	O.I.	C.G.	H.G.
14.1	99.4	60.1	At2g04160	814953	AIR3	isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.	O.I.	C.G.	H.G.
14.1	99.4	48.9	At5g66460	836778	(1-4)-beta-mannan endohydrolase, putative	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOA	O.I.	C.G.	H.G.

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GSM ID	GSM299327
Assay name	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6
GSE experiment	GSE11852: Effect of uniconazole on wt and pkl mutant germinating seeds

Microarray experiments to specifically-expressed genes

GSM ID GSM299327 Assay name pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6 GSE experiment GSE11852: Effect of uniconazole on wt and pkl mutant germinating seeds

GSM ID GSM299327

Assay name pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6

GSE experiment GSE11852: Effect of uniconazole on wt and pkl mutant germinating seeds