Microarray experiments to specifically-expressed genes

GSM ID GSM297390
Assay name At.StarchSD.WTSS3.WTR1D4
GSE experiment GSE11708: Global gene expression in Atss3 mutant and WT over short day diurnal cycle

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
14.199.4322.6At4g23600828460CORI3 (CORONATINE INDUCED 1)Encodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding.O.I.C.G.H.G.
13.599.450.0At5g64280836549DiT2.2 (dicarboxylate transporter 2.2)F:oxoglutarate:malate antiporter activity;P:malate transport, sodium ion transport;C:chloroplast, membrane;BOPAFMVO.I.C.G.H.G.
12.599.344.8At4g02130827438GATL6Encodes a protein with putative galacturonosyltransferase activity.O.I.C.G.H.G.
12.099.337.0At4g02630828217protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
11.599.346.8At2g03550814884hydrolaseF:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAVO.I.C.G.H.G.
10.999.261.9At3g20810821629transcription factor jumonji (jmjC) domain-containing proteinF:transcription factor activity;P:biological_process unknown;C:cellular_component unknown;MBOFPVO.I.C.G.H.G.
9.999.1222.2At4g34950829647nodulin family proteinF:unknown;P:unknown;C:unknown;OBPFAMO.I.C.G.H.G.
9.699.153.5At5g02940831426-F:unknown;P:unknown;C:chloroplast, chloroplast envelope;POBO.I.C.G.H.G.
9.399.1110.5At5g23240832388DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast;BOMPFAVO.I.C.G.H.G. (MATERNAL EFFECT EMBRYO ARREST 31)Encodes a protein with phosphomannose isomerase activity.O.I.C.G.H.G. thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2.O.I.C.G.H.G. MtN21 family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PBOAMO.I.C.G.H.G.
8.999.044.1At5g27290832787unknown proteinF:unknown;P:unknown;C:chloroplast;PBOO.I.C.G.H.G.
8.999.035.8At1g78995844240unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
8.899.0321.6At3g62410825414CP12-2CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.O.I.C.G.H.G.
8.799.055.7At2g47910819403CRR6 (chlororespiratory reduction 6)Encodes a chloroplast thylakoid membrane protein. Required for the assembly/accumulation of the NAD(P)H dehydrogenase complex of the photosynthetic electron transport chain.O.I.C.G.H.G.

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