Microarray experiments to specifically-expressed genes

GSM ID GSM297383
Assay name At.StarchSD.WTSS3.SS3R1L4
GSE experiment GSE11708: Global gene expression in Atss3 mutant and WT over short day diurnal cycle

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
33.699.7150.9At4g01080827902unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
23.599.645.0At5g59130836031subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
21.199.647.5At1g13650837926-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAO.I.C.G.H.G.
19.099.516.8At3g17640821031leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:unknown;PMOBFAO.I.C.G.H.G.
18.499.5279.4At1g73600843694methyltransferase/ phosphoethanolamine N-methyltransferaseF:methyltransferase activity, phosphoethanolamine N-methyltransferase activity;P:metabolic process;C:unknown;BOFAPMVO.I.C.G.H.G.
17.799.570.5At5g45820834622CIPK20 (CBL-INTERACTING PROTEIN KINASE 20)Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.O.I.C.G.H.G.
17.299.585.9At3g44450823570unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.999.569.7At4g12980826910auxin-responsive protein, putativeF:unknown;P:multicellular organismal development;C:membrane;PMFOBO.I.C.G.H.G.
16.699.537.3At5g01790831868unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
15.499.525.7At5g02180831862amino acid transporter family proteinF:amino acid transmembrane transporter activity;P:amino acid transport;C:chloroplast, membrane;MPFOBAVO.I.C.G.H.G.
15.199.417.1At4g13800827014permease-relatedF:unknown;P:biological_process unknown;C:plasma membrane;MFPOBO.I.C.G.H.G.
14.699.487.4At4g12310826840CYP706A5member of CYP706AO.I.C.G.H.G.
14.099.4179.6At3g44990823634XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8)xyloglucan endo-transglycosylaseO.I.C.G.H.G.
13.399.446.5At4g10770826672OPT7 (OLIGOPEPTIDE TRANSPORTER 7)oligopeptide transporterO.I.C.G.H.G.
11.999.311.3At4g16880827396disease resistance protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMO.I.C.G.H.G.
11.799.353.0At1g03310839531isoamylase, putative / starch debranching enzyme, putativeEncodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex.O.I.C.G.H.G.
11.799.340.5At1g53870841824unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.599.3121.8At4g08870826458arginase, putativeEncodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment.O.I.C.G.H.G.
10.999.244.2At1g18360838417hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:chloroplast;BOPMFVAO.I.C.G.H.G.
10.599.28.9At1g77960844131unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVO.I.C.G.H.G.
10.299.232.8At4g27820828895BGLU9 (BETA GLUCOSIDASE 9)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:peroxisome;BOPMFAO.I.C.G.H.G.
10.099.224.9At2g41870818787remorin family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;POMFBO.I.C.G.H.G.
10.099.221.4At1g05200839268ATGLR3.4member of Putative ligand-gated ion channel subunit familyO.I.C.G.H.G.
9.899.1150.4At4g19170827655NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4)chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenaseO.I.C.G.H.G.
9.299.142.0At4g18390827568TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;POMFBO.I.C.G.H.G.
9.299.124.0At2g45560819164CYP76C1cytochrome P450 monooxygenaseO.I.C.G.H.G.
8.999.020.5At5g44050834428MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
8.699.034.1At3g19720821509ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5)Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFPARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.O.I.C.G.H.G.



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