Microarray experiments to specifically-expressed genes

GSM ID GSM292544
Assay name 57_C132.1H.SLH1P, Experimental replicate 1
GSE experiment GSE11611: Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
673.2100.013.8GmaAffx.89680.1.S1_x_atCK605552--5e+0At3g54120reticulon family protein (RTNLB12)O.I.C.G.H.G.
197.4100.020.3GmaAffx.93645.1.S1_atNC_005096.1--8e+0At5g61390exonuclease family proteinO.I.C.G.H.G.
100.5100.00.0PsAffx.psZO004iA01r_s_atPsAffx.psZO004iA01r--1e+1At5g58110ATPase activator/ chaperone bindingO.I.C.G.H.G.
56.199.90.0GmaAffx.93647.1.S1_atNC_005097.1--1e+0At1g73550lipid bindingO.I.C.G.H.G.
45.099.912.0GmaAffx.70159.1.S1_atCA820526--9e-1At5g54215-O.I.C.G.H.G.
39.399.90.8GmaAffx.89680.1.S1_atCK605552--5e+0At3g54120reticulon family protein (RTNLB12)O.I.C.G.H.G.
35.999.90.3GmaAffx.82046.1.S1_atBQ629883--3e+0At5g62200embryo-specific protein-relatedO.I.C.G.H.G.
32.299.94.2Gma.9308.1.S1_atBG156885--6e-1At5g35737unknown proteinO.I.C.G.H.G.
31.399.98.8GmaAffx.59486.1.S1_atBI471586--6e+0At5g43570serine-type endopeptidase inhibitorO.I.C.G.H.G.
27.199.80.0HgAffx.9921.1.S1_atCB378580--3e-1At1g74620zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
26.899.81.9Gma.8493.1.S1_atAF128267.1polygalacturonase PG2-2e-8At5g14650polygalacturonase, putative / pectinase, putativeO.I.C.G.H.G.
26.599.828.0Gma.6883.1.S1_atBE658807--2e+0At3g22070proline-rich family proteinO.I.C.G.H.G.
26.599.80.0PsAffx.psHB009xO11f_atPsAffx.psHB009xO11f--4e+0At2g29590thioesterase family proteinO.I.C.G.H.G.
24.499.80.0PsAffx.CL953Contig1_atPsAffx.CL953Contig1--2e+0At3g55420unknown proteinO.I.C.G.H.G.
23.799.80.1GmaAffx.45087.1.S1_atBF716104--9e-1At2g01905CYCJ18 (CYCLIN J18)O.I.C.G.H.G.
23.099.82.8Gma.9552.2.S1_atBU760670--3e+0At5g06030self-incompatibility protein-relatedO.I.C.G.H.G.
23.099.80.0PsAffx.C486000002_atPsAffx.C486000002--2e+0At3g57090BIGYINO.I.C.G.H.G.
22.599.80.1Gma.8479.1.S1_atBI893170resistance protein MG23-4e-2At4g09430disease resistance protein (TIR-NBS-LRR class), putativeO.I.C.G.H.G.
21.499.80.0PsAffx.C55000051_s_atPsAffx.C55000051--1e+1At5g09805IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)O.I.C.G.H.G.
18.899.70.0PsAffx.C2000317_atPsAffx.C2000317--2e+0At3g60630scarecrow transcription factor family proteinO.I.C.G.H.G.
18.499.70.1GmaAffx.42822.1.A1_atBU550280--8e-2At3g63450RNA binding / nucleic acid binding / nucleotide bindingO.I.C.G.H.G.
17.799.71.6Gma.17871.1.S1_atAW397797--1e+0At3g22070proline-rich family proteinO.I.C.G.H.G.
16.999.70.0HgAffx.10885.1.S1_atCB238728--7e+0At3g59330anthocyanin-related membrane protein familyO.I.C.G.H.G.
16.899.70.0GmaAffx.62120.2.S1_atBG404926--8e-1At1g05710ethylene-responsive protein, putativeO.I.C.G.H.G.
16.499.611.4Gma.9552.1.S1_atAB086391.1hypothetical protein LOC548097-4e-1At1g49930-O.I.C.G.H.G.
16.299.60.1Gma.9552.1.A1_x_atAB086391.1hypothetical protein LOC548097-4e-1At1g49930-O.I.C.G.H.G.
15.799.60.0PsAffx.C115000011_atPsAffx.C115000011--3e+0At4g1810060S ribosomal protein L32 (RPL32A)O.I.C.G.H.G.
14.899.60.0PsAffx.C25000082_atPsAffx.C25000082--2e+0At5g07490unknown proteinO.I.C.G.H.G.
14.399.60.0PsAffx.C9000078_atPsAffx.C9000078--3e-1At2g21620RD2O.I.C.G.H.G.
14.299.60.1GmaAffx.81708.1.S1_atBG352436--8e-1At1g05385photosystem II 11 kDa protein-relatedO.I.C.G.H.G.
14.299.60.0HgAffx.22522.3.A1_atCK351588--4e+0At1g80220zinc ion bindingO.I.C.G.H.G.
14.199.60.2Gma.6236.1.S1_atBQ612376--8e-1At1g63055unknown proteinO.I.C.G.H.G.
13.999.60.4GmaAffx.83319.1.S1_atBU081287--3e+0At3g57390AGL18O.I.C.G.H.G.
13.999.60.0PsAffx.C204000008_atPsAffx.C204000008--4e-1At3g44110ATJ3O.I.C.G.H.G.
13.599.52.5GmaAffx.62723.1.S1_atBE475012--4e-15At4g30270MERI5B (meristem-5)O.I.C.G.H.G.
13.599.50.0GmaAffx.10825.1.S1_atCA784360--8e-1At3g57620glyoxal oxidase-relatedO.I.C.G.H.G.
13.399.50.0GmaAffx.91354.1.S1_s_atCF807079--1e+0At1g72510unknown proteinO.I.C.G.H.G.
13.399.50.0PsAffx.C66000067_atPsAffx.C66000067--9e-2At3g0423040S ribosomal protein S16 (RPS16B)O.I.C.G.H.G.
13.299.50.0GmaAffx.30502.1.S1_atBQ612798--4e+0At4g09260unknown proteinO.I.C.G.H.G.
13.299.50.0PsAffx.C25000102_atPsAffx.C25000102--2e+0At2g26810unknown proteinO.I.C.G.H.G.
13.199.50.0PsAffx.C131000036_atPsAffx.C131000036--3e+0At1g72740DNA-binding family protein / histone H1/H5 family proteinO.I.C.G.H.G.
13.199.50.0PsAffx.C179000015_atPsAffx.C179000015--5e+0At4g16240unknown proteinO.I.C.G.H.G.
12.799.50.0HgAffx.16074.1.S1_atCB280282--4e+0At3g57540remorin family proteinO.I.C.G.H.G.
12.799.50.0HgAffx.16883.1.S1_atCB279474--9e-1At5g41070DRB5 (DSRNA-BINDING PROTEIN 5)O.I.C.G.H.G.
12.699.50.0HgAffx.3682.1.A1_atCK349008--5e-2At1g07135glycine-rich proteinO.I.C.G.H.G.
12.599.50.1GmaAffx.37070.1.A1_atBU547533--1e+0At2g38600acid phosphatase class B family proteinO.I.C.G.H.G.
12.599.50.0GmaAffx.70540.1.A1_atCD409006--3e+0At3g55665-O.I.C.G.H.G.
12.499.50.2GmaAffx.74943.1.S1_atBQ630403--4e-1At3g22000receptor-like protein kinase-relatedO.I.C.G.H.G.
12.499.50.1GmaAffx.28100.1.S1_atBM107905--2e-3At1g72950disease resistance protein (TIR-NBS class), putativeO.I.C.G.H.G.
12.299.50.7GmaAffx.73174.1.S1_atBI699854--1e-4At3g22820allergen-relatedO.I.C.G.H.G.
12.299.50.0PsAffx.C1000006_atPsAffx.C1000006--4e-1At3g19910zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
11.999.40.1GmaAffx.64879.1.S1_atBQ080234--5e-2At3g23930unknown proteinO.I.C.G.H.G.
11.799.40.2GmaAffx.36387.1.A1_atBE819956--1e-2At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)O.I.C.G.H.G.
11.799.40.0PsAffx.C130000024_atPsAffx.C130000024--7e-1At5g60290unknown proteinO.I.C.G.H.G.
11.699.40.0HgAffx.19292.2.S1_atCB375961--4e+0At5g16140peptidyl-tRNA hydrolase family proteinO.I.C.G.H.G.
11.699.40.0PsAffx.C85000057_atPsAffx.C85000057--5e+0At2g17380AP19O.I.C.G.H.G.
11.399.40.0HgAffx.11861.1.S1_atCB376121--8e+0At3g42180catalytic/ transferase, transferring glycosyl groupsO.I.C.G.H.G.
11.299.40.0PsAffx.C53000087_atPsAffx.C53000087--9e-1At3g55460SCL30O.I.C.G.H.G.
11.099.40.0PsAffx.C185000021_atPsAffx.C185000021--2e+0At5g15480zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
10.999.40.0PsAffx.C5000144_s_atPsAffx.C5000144--3e+0At5g23411unknown proteinO.I.C.G.H.G.
10.899.40.0GmaAffx.8098.1.S1_atAW156410--7e-1At1g10240FRS11 (FAR1-related sequence 11)O.I.C.G.H.G.
10.899.40.0HgAffx.14830.1.S1_atCD748207--3e-1At2g41225unknown proteinO.I.C.G.H.G.
10.899.40.0PsAffx.C326000004_atPsAffx.C326000004--3e+0At1g17530ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23)O.I.C.G.H.G.
10.799.40.2GmaAffx.11434.1.S1_atBG157397--1e+0At1g66750CAK4 (CDK-ACTIVATING KINASE 4)O.I.C.G.H.G.
10.799.40.0GmaAffx.91354.1.S1_atCF807079--1e+0At1g72510unknown proteinO.I.C.G.H.G.
10.699.30.0Gma.9552.1.A1_atAB086391.1hypothetical protein LOC548097-4e-1At1g49930-O.I.C.G.H.G.
10.599.30.3Gma.1105.1.S1_atBI320802--2e-1At4g14385-O.I.C.G.H.G.
10.599.30.0PsAffx.C20000135_atPsAffx.C20000135--6e-1At3g2634020S proteasome beta subunit E, putativeO.I.C.G.H.G.
10.499.32.7GmaAffx.77737.1.S1_atBU084758--1e-13At1g65480FT (FLOWERING LOCUS T)O.I.C.G.H.G.
10.399.34.2Gma.12150.1.S1_atAB092557.1cysteine proteinase-5e-11At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseO.I.C.G.H.G.
10.399.31.3GmaAffx.8873.1.S1_atBG508133--3e+0At3g04181unknown proteinO.I.C.G.H.G.
10.399.30.1Gma.473.1.A1_atBM086006--3e+0At5g13710SMT1 (STEROL METHYLTRANSFERASE 1)O.I.C.G.H.G.
10.399.30.0PsAffx.C20000046_atPsAffx.C20000046--3e+0At5g46790unknown proteinO.I.C.G.H.G.
10.199.30.6GmaAffx.87793.2.S1_atBQ740671--2e-1At5g63500unknown proteinO.I.C.G.H.G.
10.199.30.3Gma.5992.4.S1_atBM567831--2e-1At5g58780dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putativeO.I.C.G.H.G.
10.199.30.0PsAffx.C13000018_s_atPsAffx.C13000018--1e+0At4g38020tRNA/rRNA methyltransferase (SpoU) family proteinO.I.C.G.H.G.
10.099.30.0HgAffx.18354.1.S1_atCD748635--5e+0At5g18110NCBP (NOVEL CAP-BINDING PROTEIN)O.I.C.G.H.G.
10.099.30.0HgAffx.2243.1.S1_atCK351480--6e-5At5g23950C2 domain-containing proteinO.I.C.G.H.G.
9.999.315.5GmaAffx.12519.1.S1_atBU080591--8e-1At3g09050unknown proteinO.I.C.G.H.G.
9.999.31.7Gma.14300.1.S1_atAW348090--2e-2At2g37750unknown proteinO.I.C.G.H.G.
9.999.30.4GmaAffx.37095.3.S1_atAW432320--2e+0At5g19151unknown proteinO.I.C.G.H.G.
9.999.30.0PsAffx.C20000017_atPsAffx.C20000017--3e+0At5g08590SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)O.I.C.G.H.G.
9.899.30.0GmaAffx.47959.1.S1_atAI748598--3e+0At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)O.I.C.G.H.G.
9.799.32.7Gma.4167.1.S1_atBG508938Abscisic acid 8'-hydroxylase-4e-1At4g19230CYP707A1O.I.C.G.H.G.
9.799.30.4Gma.2169.1.S1_s_atAW396736--3e-80At3g61050NTMC2T4O.I.C.G.H.G.
9.799.30.0GmaAffx.55944.1.S1_atBQ628408--5e-2At1g75830LCR67O.I.C.G.H.G.
9.799.30.0GmaAffx.79908.1.S1_atBI972283--5e-2At4g16780ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2)O.I.C.G.H.G.
9.799.30.0GmaAffx.9153.1.A1_atBU548572--1e+0At1g08830CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1)O.I.C.G.H.G.
9.599.20.0GmaAffx.4939.1.S1_atBI971499--1e+0At5g25450ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeO.I.C.G.H.G.
9.599.20.0PsAffx.C32000060_atPsAffx.C32000060--2e+0At2g31490unknown proteinO.I.C.G.H.G.
9.599.20.0PsAffx.C61000008_atPsAffx.C61000008--8e-2At3g21510AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)O.I.C.G.H.G.
9.399.22.4GmaAffx.70298.1.S1_atBI698911--9e-1At5g06660unknown proteinO.I.C.G.H.G.
9.399.20.4GmaAffx.86158.1.S1_atBE806262--9e-2At2g16990tetracycline transporterO.I.C.G.H.G.
9.399.20.0GmaAffx.8999.2.A1_x_atBI700574--2e+0At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.C.G.H.G.
9.399.20.0GmaAffx.93276.1.S1_atCF809001--3e-4At4g17670senescence-associated protein-relatedO.I.C.G.H.G.
9.399.20.0HgAffx.15270.1.S1_atCB281724--1e+0At1g24600unknown proteinO.I.C.G.H.G.
9.299.20.2GmaAffx.26311.1.S1_atBE348003--5e-2At2g28120nodulin family proteinO.I.C.G.H.G.
9.299.20.1GmaAffx.47327.1.S1_atBU926332--9e-1At5g03920unknown proteinO.I.C.G.H.G.
9.299.20.0GmaAffx.51899.1.S1_atBU964968--7e-20At1g688902-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate bindingO.I.C.G.H.G.
9.199.20.0GmaAffx.23714.1.S1_atBM523128--3e+0At1g71470unknown proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage