CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM284398

Assay name Arabidopsis GGSc2

GSE experiment GSE11262: Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1053.7 100.0 210.2 At1g49800 841403 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
1034.0 100.0 932.3 At3g23450 3768908 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system O.I. C.G. H.G.
871.8 100.0 192.4 At3g21500 821704 1-deoxy-D-xylulose-5-phosphate synthase Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. O.I. C.G. H.G.
727.2 100.0 122.8 At1g20550 838643 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
685.8 100.0 145.5 At4g32170 829349 CYP96A2 member of CYP96A O.I. C.G. H.G.
600.6 100.0 49.5 At2g45840 819192 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFBOV O.I. C.G. H.G.
570.0 100.0 102.0 At3g13540 820556 ATMYB5 (MYB DOMAIN PROTEIN 5) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches). O.I. C.G. H.G.
568.4 100.0 525.2 At5g47350 834782 palmitoyl protein thioesterase family protein F:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFO O.I. C.G. H.G.
513.4 100.0 237.5 At3g07980 819989 MAPKKK6 MAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential. O.I. C.G. H.G.
458.4 100.0 195.3 At3g24480 822038 leucine-rich repeat family protein / extensin family protein F:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;PMOBFVA O.I. C.G. H.G.
451.5 100.0 95.4 At4g19380 827679 alcohol oxidase-related F:electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:unknown;C:cellular_component unknown;BOFMPA O.I. C.G. H.G.
414.6 100.0 62.9 At2g37260 818303 TTG2 (TRANSPARENT TESTA GLABRA 2) Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent. O.I. C.G. H.G.
376.3 100.0 101.7 At4g03930 825703 enzyme inhibitor/ pectinesterase F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
369.8 100.0 577.4 At2g38900 818474 serine protease inhibitor, potato inhibitor I-type family protein Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. O.I. C.G. H.G.
366.9 100.0 274.7 At2g42830 818883 SHP2 (SHATTERPROOF 2) AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG). O.I. C.G. H.G.
366.4 100.0 207.0 At3g58780 825047 SHP1 (SHATTERPROOF 1) One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells. O.I. C.G. H.G.
352.0 100.0 422.3 At1g30530 839933 UGT78D1 (UDP-GLUCOSYL TRANSFERASE 78D1) The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin O.I. C.G. H.G.
348.8 100.0 98.2 At5g35550 833520 TT2 (TRANSPARENT TESTA 2) TT2 encodes a R2R3 MYB domain putative transcription factor that acts as a key determinant in the proanthocyanidin accumulation of developing seed. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. O.I. C.G. H.G.
343.9 100.0 1012.4 At2g07671 815343 H+-transporting two-sector ATPase, C subunit family protein F:hydrogen ion transmembrane transporter activity, ATPase activity;P:proton transport, ATP synthesis coupled proton transport;C:proton-transporting ATP synthase complex, coupling factor F(o), proton-transporting two-sector ATPase complex, proton-transporting domain;OBMFP O.I. C.G. H.G.
331.6 100.0 243.0 At1g24540 839069 CYP86C1 member of CYP86C O.I. C.G. H.G.
324.8 100.0 84.9 At5g13670 831212 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;BOPAM O.I. C.G. H.G.
323.3 100.0 142.8 At5g14130 831263 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
294.1 100.0 215.6 At3g49270 824088 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPO O.I. C.G. H.G.
288.4 100.0 647.8 At4g15750 827253 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
286.1 100.0 81.1 At1g17260 838297 AHA10 (Autoinhibited H(+)-ATPase isoform 10) belongs to H+-APTase gene family, involved in proanthocyanidin biosynthesis, disturbs the vacuolar biogenesis and acidification process O.I. C.G. H.G.
276.1 100.0 111.2 At1g26210 839162 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV O.I. C.G. H.G.
269.8 100.0 65.9 At3g09710 820128 IQD1 (IQ-DOMAIN 1) Ca(2+)-dependent calmodulin-binding protein. Targeted to the nucleus. Involved in glucosinolate metabolism in response to biotic challenge. Expressed in vascular tissue. O.I. C.G. H.G.
254.2 100.0 496.3 At2g22080 816743 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:nucleus;MBOFPVA O.I. C.G. H.G.
253.7 100.0 119.7 At1g79110 844252 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVF O.I. C.G. H.G.
248.1 100.0 138.2 At1g11590 837702 pectin methylesterase, putative F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOM O.I. C.G. H.G.
244.0 100.0 56.2 At1g77520 844088 O-methyltransferase family 2 protein F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM O.I. C.G. H.G.
242.1 100.0 295.4 At1g06550 837166 enoyl-CoA hydratase/isomerase family protein F:3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity;P:fatty acid beta-oxidation, metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
235.3 100.0 51.0 At1g66460 842964 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
230.6 100.0 63.3 At2g34200 817981 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:membrane;PMO O.I. C.G. H.G.
228.2 100.0 177.9 At5g23890 832454 - F:unknown;P:unknown;C:mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope;MOBFPAV O.I. C.G. H.G.
224.4 100.0 74.0 At5g44700 834499 GSO2 (GASSHO 2) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis. O.I. C.G. H.G.
222.8 100.0 274.7 At1g28420 839740 HB-1 (homeobox-1) F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MOFBPVA O.I. C.G. H.G.
213.5 100.0 969.9 At4g12960 826908 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
208.8 100.0 328.2 At3g29075 822552 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
208.3 100.0 47.8 At3g28960 822536 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPFOBAV O.I. C.G. H.G.
208.1 100.0 494.0 At5g42800 834291 DFR (DIHYDROFLAVONOL 4-REDUCTASE) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. O.I. C.G. H.G.
202.9 100.0 103.3 At3g49050 824066 lipase class 3 family protein / calmodulin-binding heat-shock protein, putative F:triacylglycerol lipase activity, calmodulin binding;P:lipid catabolic process, lipid metabolic process;C:endomembrane system;MPOFB O.I. C.G. H.G.
201.4 100.0 143.2 At1g12330 837787 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;PFOM O.I. C.G. H.G.
196.8 100.0 72.7 At5g42660 834275 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;POBA O.I. C.G. H.G.
175.4 100.0 95.2 At1g09790 837508 COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR) F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
170.5 100.0 248.7 At5g60030 836125 unknown protein F:unknown;P:unknown;C:unknown;MOFBPVA O.I. C.G. H.G.
169.8 100.0 52.6 At3g53350 824503 myosin heavy chain-related F:unknown;P:biological_process unknown;C:nucleus;MOBFPAV O.I. C.G. H.G.
166.4 100.0 214.6 At5g19900 832112 PRLI-interacting factor, putative F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVA O.I. C.G. H.G.
162.6 99.9 18.1 At5g38970 833889 BR6OX1 (BRASSINOSTEROID-6-OXIDASE 1) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized. O.I. C.G. H.G.
156.8 99.9 99.4 At5g06350 830523 binding F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
155.5 99.9 86.1 At3g16170 820862 acyl-activating enzyme 13 (AAE13) F:catalytic activity, AMP binding;P:metabolic process;C:membrane;BOFMPAV O.I. C.G. H.G.
154.4 99.9 60.1 At3g21070 821659 NADK1 (NAD KINASE 1) Encodes a protein with NAD(H) kinase activity. O.I. C.G. H.G.
152.6 99.9 116.2 At4g34138 829561 UGT73B1 (UDP-glucosyl transferase 73B1) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
152.5 99.9 102.3 At5g52280 835304 protein transport protein-related F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPAV O.I. C.G. H.G.
148.7 99.9 185.1 At2g23910 816923 cinnamoyl-CoA reductase-related F:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, cellular metabolic process, metabolic process;C:cellular_component unknown;POBFM O.I. C.G. H.G.
147.3 99.9 233.3 At3g20520 821598 SVL3 (SHV3-LIKE 3) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOM O.I. C.G. H.G.
140.4 99.9 268.8 At5g49180 834977 pectinesterase family protein Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds. O.I. C.G. H.G.
133.3 99.9 36.3 At5g18610 831979 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
132.4 99.9 116.0 At2g35620 818130 FEI2 (FEI 2) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots. O.I. C.G. H.G.
131.6 99.9 164.2 At1g77260 844062 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PBOM O.I. C.G. H.G.
129.8 99.9 208.2 At1g44810 841045 transcription regulator F:transcription regulator activity;P:biological_process unknown;C:cellular_component unknown;MOFPBV O.I. C.G. H.G.
128.1 99.9 137.5 At1g02520 839353 PGP11 (P-GLYCOPROTEIN 11) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
127.6 99.9 120.1 At1g03970 839356 GBF4 encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers. O.I. C.G. H.G.
126.8 99.9 125.8 At5g56300 835729 GAMT2 (GIBBERELLIC ACID METHYLTRANSFERASE 2) A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development. O.I. C.G. H.G.
126.8 99.9 57.8 At4g17480 827459 palmitoyl protein thioesterase family protein F:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFO O.I. C.G. H.G.
126.0 99.9 86.8 At1g76890 844024 - - O.I. C.G. H.G.
125.2 99.9 274.0 At3g20210 821565 DELTA-VPE Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat. O.I. C.G. H.G.
124.8 99.9 34.1 At1g63300 842636 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPAV O.I. C.G. H.G.
124.3 99.9 70.3 At3g29310 822589 calmodulin-binding protein-related F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOFPBV O.I. C.G. H.G.
123.3 99.9 85.2 At5g39220 833918 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOMPAF O.I. C.G. H.G.
122.3 99.9 143.7 At1g62990 842602 KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7) Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46. O.I. C.G. H.G.
120.6 99.9 87.8 At3g46770 823830 transcriptional factor B3 family protein F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
120.3 99.9 94.8 At2g31370 817695 bZIP transcription factor (POSF21) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;OMFPBVA O.I. C.G. H.G.
120.2 99.9 41.1 At3g59420 825111 ACR4 (ARABIDOPSIS CRINKLY4) Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes. O.I. C.G. H.G.
118.4 99.9 50.0 At1g80810 844420 binding F:binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
117.9 99.9 89.4 At3g50550 824219 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVA O.I. C.G. H.G.
117.8 99.9 247.5 At4g36810 829834 GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. O.I. C.G. H.G.
115.1 99.9 58.3 At2g47500 819363 ATP binding / microtubule motor F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFP O.I. C.G. H.G.
114.7 99.9 82.4 At5g24910 832560 CYP714A1 member of CYP714A O.I. C.G. H.G.
113.9 99.9 53.3 At4g30110 829134 HMA2 encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc O.I. C.G. H.G.
112.8 99.9 86.0 At4g00270 827164 DNA-binding storekeeper protein-related F:transcription regulator activity;P:biological_process unknown;C:chloroplast;POM O.I. C.G. H.G.
112.5 99.9 78.0 At2g42040 818804 - F:molecular_function unknown;P:biological_process unknown;C:unknown;PMO O.I. C.G. H.G.
112.4 99.9 127.3 At3g11030 820274 unknown protein F:unknown;P:unknown;C:unknown;MPOBFVA O.I. C.G. H.G.
111.9 99.9 252.2 At1g15200 838086 protein-protein interaction regulator family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
111.8 99.9 104.3 At1g61350 842429 armadillo/beta-catenin repeat family protein F:binding;P:biological_process unknown;C:cellular_component unknown;PMFO O.I. C.G. H.G.
109.9 99.9 117.0 At5g25060 832577 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:unknown;MOFPBVA O.I. C.G. H.G.
109.2 99.9 76.8 At1g71180 843458 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
108.3 99.9 257.1 At3g50690 824233 leucine-rich repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
106.0 99.9 76.2 At5g55250 835618 IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D. O.I. C.G. H.G.
104.9 99.9 157.8 At4g09960 826586 STK (SEEDSTICK) a MADS box transcription factor expressed in the carpel and ovules O.I. C.G. H.G.
104.9 99.9 84.6 At1g79840 844323 GL2 (GLABRA 2) Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER. O.I. C.G. H.G.
104.9 99.9 74.0 At2g06210 815177 ELF8 (EARLY FLOWERING 8) Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. O.I. C.G. H.G.
103.4 99.9 348.9 At1g47970 841215 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cytosol;MOFBPVA O.I. C.G. H.G.
103.2 99.9 285.1 At2g07711 3768480 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
102.4 99.9 164.1 At5g45190 834555 cyclin family protein Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV). O.I. C.G. H.G.
101.8 99.9 79.4 At5g51480 835222 SKS2 (SKU5 SIMILAR 2) F:oxidoreductase activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;FBPMOA O.I. C.G. H.G.
100.5 99.9 89.8 At1g05460 837047 SDE3 (SILENCING DEFECTIVE) Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing. O.I. C.G. H.G.
99.7 99.9 166.6 At4g24130 828513 unknown protein F:unknown;P:biological_process unknown;C:nucleus;P O.I. C.G. H.G.
99.7 99.9 113.7 At5g51950 835270 glucose-methanol-choline (GMC) oxidoreductase family protein F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:response to salt stress;C:endomembrane system;OBFMPVA O.I. C.G. H.G.
99.0 99.9 227.1 At5g05270 830409 chalcone-flavanone isomerase family protein F:chalcone isomerase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
1053.7	100.0	210.2	At1g49800	841403	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
1034.0	100.0	932.3	At3g23450	3768908	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system	O.I.	C.G.	H.G.
871.8	100.0	192.4	At3g21500	821704	1-deoxy-D-xylulose-5-phosphate synthase	Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity.	O.I.	C.G.	H.G.
727.2	100.0	122.8	At1g20550	838643	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
685.8	100.0	145.5	At4g32170	829349	CYP96A2	member of CYP96A	O.I.	C.G.	H.G.
600.6	100.0	49.5	At2g45840	819192	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFBOV	O.I.	C.G.	H.G.
570.0	100.0	102.0	At3g13540	820556	ATMYB5 (MYB DOMAIN PROTEIN 5)	Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).	O.I.	C.G.	H.G.
568.4	100.0	525.2	At5g47350	834782	palmitoyl protein thioesterase family protein	F:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
513.4	100.0	237.5	At3g07980	819989	MAPKKK6	MAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential.	O.I.	C.G.	H.G.
458.4	100.0	195.3	At3g24480	822038	leucine-rich repeat family protein / extensin family protein	F:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;PMOBFVA	O.I.	C.G.	H.G.
451.5	100.0	95.4	At4g19380	827679	alcohol oxidase-related	F:electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:unknown;C:cellular_component unknown;BOFMPA	O.I.	C.G.	H.G.
414.6	100.0	62.9	At2g37260	818303	TTG2 (TRANSPARENT TESTA GLABRA 2)	Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.	O.I.	C.G.	H.G.
376.3	100.0	101.7	At4g03930	825703	enzyme inhibitor/ pectinesterase	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
369.8	100.0	577.4	At2g38900	818474	serine protease inhibitor, potato inhibitor I-type family protein	Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.	O.I.	C.G.	H.G.
366.9	100.0	274.7	At2g42830	818883	SHP2 (SHATTERPROOF 2)	AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).	O.I.	C.G.	H.G.
366.4	100.0	207.0	At3g58780	825047	SHP1 (SHATTERPROOF 1)	One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.	O.I.	C.G.	H.G.
352.0	100.0	422.3	At1g30530	839933	UGT78D1 (UDP-GLUCOSYL TRANSFERASE 78D1)	The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin	O.I.	C.G.	H.G.
348.8	100.0	98.2	At5g35550	833520	TT2 (TRANSPARENT TESTA 2)	TT2 encodes a R2R3 MYB domain putative transcription factor that acts as a key determinant in the proanthocyanidin accumulation of developing seed. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.	O.I.	C.G.	H.G.
343.9	100.0	1012.4	At2g07671	815343	H+-transporting two-sector ATPase, C subunit family protein	F:hydrogen ion transmembrane transporter activity, ATPase activity;P:proton transport, ATP synthesis coupled proton transport;C:proton-transporting ATP synthase complex, coupling factor F(o), proton-transporting two-sector ATPase complex, proton-transporting domain;OBMFP	O.I.	C.G.	H.G.
331.6	100.0	243.0	At1g24540	839069	CYP86C1	member of CYP86C	O.I.	C.G.	H.G.
324.8	100.0	84.9	At5g13670	831212	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;BOPAM	O.I.	C.G.	H.G.
323.3	100.0	142.8	At5g14130	831263	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
294.1	100.0	215.6	At3g49270	824088	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPO	O.I.	C.G.	H.G.
288.4	100.0	647.8	At4g15750	827253	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
286.1	100.0	81.1	At1g17260	838297	AHA10 (Autoinhibited H(+)-ATPase isoform 10)	belongs to H+-APTase gene family, involved in proanthocyanidin biosynthesis, disturbs the vacuolar biogenesis and acidification process	O.I.	C.G.	H.G.
276.1	100.0	111.2	At1g26210	839162	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV	O.I.	C.G.	H.G.
269.8	100.0	65.9	At3g09710	820128	IQD1 (IQ-DOMAIN 1)	Ca(2+)-dependent calmodulin-binding protein. Targeted to the nucleus. Involved in glucosinolate metabolism in response to biotic challenge. Expressed in vascular tissue.	O.I.	C.G.	H.G.
254.2	100.0	496.3	At2g22080	816743	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:nucleus;MBOFPVA	O.I.	C.G.	H.G.
253.7	100.0	119.7	At1g79110	844252	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVF	O.I.	C.G.	H.G.
248.1	100.0	138.2	At1g11590	837702	pectin methylesterase, putative	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOM	O.I.	C.G.	H.G.
244.0	100.0	56.2	At1g77520	844088	O-methyltransferase family 2 protein	F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM	O.I.	C.G.	H.G.
242.1	100.0	295.4	At1g06550	837166	enoyl-CoA hydratase/isomerase family protein	F:3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity;P:fatty acid beta-oxidation, metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
235.3	100.0	51.0	At1g66460	842964	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
230.6	100.0	63.3	At2g34200	817981	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:membrane;PMO	O.I.	C.G.	H.G.
228.2	100.0	177.9	At5g23890	832454	-	F:unknown;P:unknown;C:mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope;MOBFPAV	O.I.	C.G.	H.G.
224.4	100.0	74.0	At5g44700	834499	GSO2 (GASSHO 2)	Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.	O.I.	C.G.	H.G.
222.8	100.0	274.7	At1g28420	839740	HB-1 (homeobox-1)	F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MOFBPVA	O.I.	C.G.	H.G.
213.5	100.0	969.9	At4g12960	826908	gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
208.8	100.0	328.2	At3g29075	822552	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
208.3	100.0	47.8	At3g28960	822536	amino acid transporter family protein	F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPFOBAV	O.I.	C.G.	H.G.
208.1	100.0	494.0	At5g42800	834291	DFR (DIHYDROFLAVONOL 4-REDUCTASE)	dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.	O.I.	C.G.	H.G.
202.9	100.0	103.3	At3g49050	824066	lipase class 3 family protein / calmodulin-binding heat-shock protein, putative	F:triacylglycerol lipase activity, calmodulin binding;P:lipid catabolic process, lipid metabolic process;C:endomembrane system;MPOFB	O.I.	C.G.	H.G.
201.4	100.0	143.2	At1g12330	837787	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast;PFOM	O.I.	C.G.	H.G.
196.8	100.0	72.7	At5g42660	834275	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;POBA	O.I.	C.G.	H.G.
175.4	100.0	95.2	At1g09790	837508	COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR)	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
170.5	100.0	248.7	At5g60030	836125	unknown protein	F:unknown;P:unknown;C:unknown;MOFBPVA	O.I.	C.G.	H.G.
169.8	100.0	52.6	At3g53350	824503	myosin heavy chain-related	F:unknown;P:biological_process unknown;C:nucleus;MOBFPAV	O.I.	C.G.	H.G.
166.4	100.0	214.6	At5g19900	832112	PRLI-interacting factor, putative	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVA	O.I.	C.G.	H.G.
162.6	99.9	18.1	At5g38970	833889	BR6OX1 (BRASSINOSTEROID-6-OXIDASE 1)	Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.	O.I.	C.G.	H.G.
156.8	99.9	99.4	At5g06350	830523	binding	F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
155.5	99.9	86.1	At3g16170	820862	acyl-activating enzyme 13 (AAE13)	F:catalytic activity, AMP binding;P:metabolic process;C:membrane;BOFMPAV	O.I.	C.G.	H.G.
154.4	99.9	60.1	At3g21070	821659	NADK1 (NAD KINASE 1)	Encodes a protein with NAD(H) kinase activity.	O.I.	C.G.	H.G.
152.6	99.9	116.2	At4g34138	829561	UGT73B1 (UDP-glucosyl transferase 73B1)	F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
152.5	99.9	102.3	At5g52280	835304	protein transport protein-related	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPAV	O.I.	C.G.	H.G.
148.7	99.9	185.1	At2g23910	816923	cinnamoyl-CoA reductase-related	F:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, cellular metabolic process, metabolic process;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
147.3	99.9	233.3	At3g20520	821598	SVL3 (SHV3-LIKE 3)	F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOM	O.I.	C.G.	H.G.
140.4	99.9	268.8	At5g49180	834977	pectinesterase family protein	Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds.	O.I.	C.G.	H.G.
133.3	99.9	36.3	At5g18610	831979	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
132.4	99.9	116.0	At2g35620	818130	FEI2 (FEI 2)	Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.	O.I.	C.G.	H.G.
131.6	99.9	164.2	At1g77260	844062	dehydration-responsive protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;PBOM	O.I.	C.G.	H.G.
129.8	99.9	208.2	At1g44810	841045	transcription regulator	F:transcription regulator activity;P:biological_process unknown;C:cellular_component unknown;MOFPBV	O.I.	C.G.	H.G.
128.1	99.9	137.5	At1g02520	839353	PGP11 (P-GLYCOPROTEIN 11)	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
127.6	99.9	120.1	At1g03970	839356	GBF4	encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.	O.I.	C.G.	H.G.
126.8	99.9	125.8	At5g56300	835729	GAMT2 (GIBBERELLIC ACID METHYLTRANSFERASE 2)	A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.	O.I.	C.G.	H.G.
126.8	99.9	57.8	At4g17480	827459	palmitoyl protein thioesterase family protein	F:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
126.0	99.9	86.8	At1g76890	844024	-	-	O.I.	C.G.	H.G.
125.2	99.9	274.0	At3g20210	821565	DELTA-VPE	Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.	O.I.	C.G.	H.G.
124.8	99.9	34.1	At1g63300	842636	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPAV	O.I.	C.G.	H.G.
124.3	99.9	70.3	At3g29310	822589	calmodulin-binding protein-related	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOFPBV	O.I.	C.G.	H.G.
123.3	99.9	85.2	At5g39220	833918	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOMPAF	O.I.	C.G.	H.G.
122.3	99.9	143.7	At1g62990	842602	KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7)	Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.	O.I.	C.G.	H.G.
120.6	99.9	87.8	At3g46770	823830	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
120.3	99.9	94.8	At2g31370	817695	bZIP transcription factor (POSF21)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;OMFPBVA	O.I.	C.G.	H.G.
120.2	99.9	41.1	At3g59420	825111	ACR4 (ARABIDOPSIS CRINKLY4)	Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes.	O.I.	C.G.	H.G.
118.4	99.9	50.0	At1g80810	844420	binding	F:binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
117.9	99.9	89.4	At3g50550	824219	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVA	O.I.	C.G.	H.G.
117.8	99.9	247.5	At4g36810	829834	GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1)	Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.	O.I.	C.G.	H.G.
115.1	99.9	58.3	At2g47500	819363	ATP binding / microtubule motor	F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFP	O.I.	C.G.	H.G.
114.7	99.9	82.4	At5g24910	832560	CYP714A1	member of CYP714A	O.I.	C.G.	H.G.
113.9	99.9	53.3	At4g30110	829134	HMA2	encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc	O.I.	C.G.	H.G.
112.8	99.9	86.0	At4g00270	827164	DNA-binding storekeeper protein-related	F:transcription regulator activity;P:biological_process unknown;C:chloroplast;POM	O.I.	C.G.	H.G.
112.5	99.9	78.0	At2g42040	818804	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;PMO	O.I.	C.G.	H.G.
112.4	99.9	127.3	At3g11030	820274	unknown protein	F:unknown;P:unknown;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
111.9	99.9	252.2	At1g15200	838086	protein-protein interaction regulator family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
111.8	99.9	104.3	At1g61350	842429	armadillo/beta-catenin repeat family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;PMFO	O.I.	C.G.	H.G.
109.9	99.9	117.0	At5g25060	832577	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:unknown;MOFPBVA	O.I.	C.G.	H.G.
109.2	99.9	76.8	At1g71180	843458	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
108.3	99.9	257.1	At3g50690	824233	leucine-rich repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
106.0	99.9	76.2	At5g55250	835618	IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1)	Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.	O.I.	C.G.	H.G.
104.9	99.9	157.8	At4g09960	826586	STK (SEEDSTICK)	a MADS box transcription factor expressed in the carpel and ovules	O.I.	C.G.	H.G.
104.9	99.9	84.6	At1g79840	844323	GL2 (GLABRA 2)	Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.	O.I.	C.G.	H.G.
104.9	99.9	74.0	At2g06210	815177	ELF8 (EARLY FLOWERING 8)	Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.	O.I.	C.G.	H.G.
103.4	99.9	348.9	At1g47970	841215	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cytosol;MOFBPVA	O.I.	C.G.	H.G.
103.2	99.9	285.1	At2g07711	3768480	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
102.4	99.9	164.1	At5g45190	834555	cyclin family protein	Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).	O.I.	C.G.	H.G.
101.8	99.9	79.4	At5g51480	835222	SKS2 (SKU5 SIMILAR 2)	F:oxidoreductase activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;FBPMOA	O.I.	C.G.	H.G.
100.5	99.9	89.8	At1g05460	837047	SDE3 (SILENCING DEFECTIVE)	Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.	O.I.	C.G.	H.G.
99.7	99.9	166.6	At4g24130	828513	unknown protein	F:unknown;P:biological_process unknown;C:nucleus;P	O.I.	C.G.	H.G.
99.7	99.9	113.7	At5g51950	835270	glucose-methanol-choline (GMC) oxidoreductase family protein	F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:response to salt stress;C:endomembrane system;OBFMPVA	O.I.	C.G.	H.G.
99.0	99.9	227.1	At5g05270	830409	chalcone-flavanone isomerase family protein	F:chalcone isomerase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;P	O.I.	C.G.	H.G.

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GSM ID	GSM284398
Assay name	Arabidopsis GGSc2
GSE experiment	GSE11262: Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.

Microarray experiments to specifically-expressed genes

GSM ID GSM284398 Assay name Arabidopsis GGSc2 GSE experiment GSE11262: Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.

GSM ID GSM284398

Assay name Arabidopsis GGSc2

GSE experiment GSE11262: Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.