CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM272992

Assay name flu over-tAPX 14-2, biological rep2

GSE experiment GSE10812: Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
196.1 100.0 427.8 At1g77490 844085 TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE) Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. O.I. C.G. H.G.
100.0 99.9 258.3 At1g51760 841602 IAR3 (IAA-ALANINE RESISTANT 3) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. O.I. C.G. H.G.
77.3 99.9 104.7 At1g66090 842923 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PBOMF O.I. C.G. H.G.
73.4 99.9 129.7 At5g50570 835126 squamosa promoter-binding protein, putative F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM O.I. C.G. H.G.
68.7 99.9 114.5 At1g01560 839523 ATMPK11 member of MAP Kinase O.I. C.G. H.G.
56.2 99.8 93.5 At1g61120 842405 TPS04 (TERPENE SYNTHASE 04) Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum. O.I. C.G. H.G.
43.2 99.8 184.5 At1g05680 837075 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
41.8 99.8 197.3 At4g37370 829891 CYP81D8 member of CYP81D O.I. C.G. H.G.
40.5 99.8 326.5 At2g06050 815160 OPR3 (OPDA-REDUCTASE 3) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. O.I. C.G. H.G.
39.7 99.8 14.8 At1g43000 840898 zinc-binding family protein F:binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
38.9 99.8 131.3 At5g51440 835218 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) F:molecular_function unknown;P:response to heat;C:unknown;BPOAFM O.I. C.G. H.G.
38.4 99.8 149.4 At4g23140 828413 CRK6 (CYSTEINE-RICH RLK 6) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) O.I. C.G. H.G.
38.0 99.8 82.4 At3g25610 822148 haloacid dehalogenase-like hydrolase family protein F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAV O.I. C.G. H.G.
37.5 99.7 15.7 At4g04510 825781 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
37.4 99.7 29.6 At3g21070 821659 NADK1 (NAD KINASE 1) Encodes a protein with NAD(H) kinase activity. O.I. C.G. H.G.
37.4 99.7 14.6 At1g61610 842457 S-locus lectin protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
35.1 99.7 130.1 At1g17380 838310 JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5) F:molecular_function unknown;P:response to jasmonic acid stimulus;C:cellular_component unknown;P O.I. C.G. H.G.
35.0 99.7 319.6 At2g24850 817022 TAT3 (TYROSINE AMINOTRANSFERASE 3) Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid. O.I. C.G. H.G.
34.1 99.7 139.8 At1g72520 843584 lipoxygenase, putative F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth, jasmonic acid biosynthetic process, response to wounding, defense response;C:chloroplast;PMBFO O.I. C.G. H.G.
33.9 99.7 390.7 At4g01870 828228 tolB protein-related F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;OBPFAM O.I. C.G. H.G.
33.0 99.7 263.4 At4g27410 828849 RD26 (RESPONSIVE TO DESICCATION 26) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response. O.I. C.G. H.G.
32.2 99.7 162.2 At3g09350 820091 armadillo/beta-catenin repeat family protein F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
30.4 99.7 290.6 At4g14365 827080 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
29.7 99.7 123.5 At4g39640 830118 GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast. O.I. C.G. H.G.
29.6 99.7 156.6 At5g54170 835505 - F:molecular_function unknown;P:response to wounding;C:unknown;MPO O.I. C.G. H.G.
29.5 99.7 62.8 At4g35600 829712 CONNEXIN 32 plant-type connexin (gap junction-type protein), a component of plasmodesmata O.I. C.G. H.G.
28.3 99.7 93.4 At1g74710 843810 isochorismate synthase 1 (ICS1) / isochorismate mutase Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870). O.I. C.G. H.G.
28.0 99.7 94.9 At5g53050 835385 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOMPFAV O.I. C.G. H.G.
28.0 99.7 24.7 At1g16420 838212 MC8 (METACASPASE 8) Encodes a metacaspase (cysteine-type endopeptidase) that is involved in promoting programmed cell death in response to hydrogen peroxide (H2O2), UV light, and methyl viologen (MV). Transcript levels rise in response to UV-C, H2O2, and MV. In vitro assays demonstrate that this enzyme has a preference for cleaving after an arginine residue, and it has a pH optimum of 8.0. O.I. C.G. H.G.
27.3 99.7 45.8 At4g23220 828421 kinase F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
26.1 99.7 44.6 At5g54300 835518 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBA O.I. C.G. H.G.
25.6 99.7 242.7 At1g55450 841992 embryo-abundant protein-related F:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOA O.I. C.G. H.G.
25.4 99.6 143.1 At3g51450 824308 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAF O.I. C.G. H.G.
25.4 99.6 50.1 At4g21390 827891 B120 F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
25.3 99.6 26.7 At1g24150 839028 FH4 (FORMIN HOMOLOGUE 4) Encodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin. O.I. C.G. H.G.
25.2 99.6 140.7 At3g06500 819828 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative F:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPB O.I. C.G. H.G.
24.7 99.6 131.7 At4g05020 825844 NDB2 (NAD(P)H dehydrogenase B2) F:disulfide oxidoreductase activity, oxidoreductase activity, FAD binding;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion;BOFPAM O.I. C.G. H.G.
24.5 99.6 184.1 At3g44860 823620 FAMT (farnesoic acid carboxyl-O-methyltransferase) Encodes a farnesoic acid carboxyl-O-methyltransferase. O.I. C.G. H.G.
24.2 99.6 43.5 At5g60800 836201 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA O.I. C.G. H.G.
24.1 99.6 28.5 At3g46110 823754 unknown protein F:unknown;P:unknown;C:plasma membrane;P O.I. C.G. H.G.
23.9 99.6 31.6 At4g23190 828418 CRK11 (CYSTEINE-RICH RLK11) Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307) O.I. C.G. H.G.
23.6 99.6 70.9 At5g62570 836377 calmodulin-binding protein F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
23.4 99.6 59.0 At5g47730 834824 SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative F:transporter activity, binding;P:transport;C:cellular_component unknown;MPFO O.I. C.G. H.G.
23.4 99.6 38.3 At4g16890 827397 SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) Encodes a Toll Interleukin1 receptor-nucleotide binding-Leu- rich repeat-type resistance gene (TIR-NB-LRR-type) involved in the salicylic acid-dependent defense response pathway. Mutant plants constitutively express pathogenesis-related (PR) genes and are pathogen resistant. Resistance signaling in snc1 requires EDS1, MOS3 and PAD4. O.I. C.G. H.G.
22.9 99.6 122.1 At1g44350 841026 ILL6 encodes a protein similar to IAA amino acid conjugate hydrolase. O.I. C.G. H.G.
22.7 99.6 165.8 At1g74310 843771 ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. O.I. C.G. H.G.
22.5 99.6 50.8 At3g48090 823964 EDS1 (enhanced disease susceptibility 1) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases. O.I. C.G. H.G.
22.2 99.6 130.3 At2g37940 818371 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MOP O.I. C.G. H.G.
22.2 99.6 35.1 At2g25140 817052 CLPB4 (CASEIN LYTIC PROTEINASE B4) Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress. O.I. C.G. H.G.
21.8 99.6 184.4 At1g72450 843577 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6) JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. O.I. C.G. H.G.
21.7 99.6 193.0 At2g29450 817494 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) Encodes a member of the TAU glutathione S-transferase gene family. Gene expression is induced by exposure to auxin, pathogen and herbicides. Naming convention according to Wagner et al. (2002) O.I. C.G. H.G.
21.5 99.6 26.6 At4g10390 826631 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:response to wounding;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
21.5 99.6 14.6 At4g38560 830013 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAFV O.I. C.G. H.G.
21.4 99.6 147.6 At3g26830 822298 PAD3 (PHYTOALEXIN DEFICIENT 3) Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. O.I. C.G. H.G.
21.3 99.6 153.1 At1g52890 841722 ANAC019 (Arabidopsis NAC domain containing protein 19) encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro. O.I. C.G. H.G.
21.1 99.6 63.0 At5g01540 831722 LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1) Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. O.I. C.G. H.G.
21.1 99.6 17.4 At4g22980 828397 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBA O.I. C.G. H.G.
21.0 99.6 30.3 At4g04490 825779 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
20.7 99.6 262.7 At3g22370 821806 AOX1A (ALTERNATIVE OXIDASE 1A) Encodes an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. O.I. C.G. H.G.
20.7 99.6 103.3 At1g17420 838314 LOX3 Lipoxygenase O.I. C.G. H.G.
20.6 99.6 12.6 At1g69610 843297 structural constituent of ribosome F:structural constituent of ribosome;P:N-terminal protein myristoylation, translation;C:ribosome, intracellular;OPMFB O.I. C.G. H.G.
20.4 99.6 22.3 At1g72280 843560 AERO1 (Arabidopsis endoplasmic reticulum oxidoreductins 1) endoplasmic reticulum oxidoreductin O.I. C.G. H.G.
20.3 99.6 124.6 At1g73480 843683 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOPMFVA O.I. C.G. H.G.
20.2 99.6 194.8 At4g33050 829442 EDA39 (embryo sac development arrest 39) F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFO O.I. C.G. H.G.
20.0 99.6 65.1 At5g47070 834753 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
19.9 99.6 83.6 At4g18880 827622 AT-HSFA4A member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
19.6 99.6 151.1 At4g39670 830121 glycolipid binding / glycolipid transporter F:glycolipid transporter activity, glycolipid binding;P:glycolipid transport;C:cytoplasm;MPOF O.I. C.G. H.G.
19.4 99.6 362.5 At3g57260 824893 BGL2 (BETA-1,3-GLUCANASE 2) beta 1,3-glucanase O.I. C.G. H.G.
19.4 99.6 130.2 At1g20510 838639 OPCL1 (OPC-8:0 COA LIGASE1) F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding;C:peroxisome;BOFMPAV O.I. C.G. H.G.
19.3 99.6 65.0 At1g66880 843006 serine/threonine protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
19.3 99.6 41.2 At2g46510 819262 ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR) Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive. O.I. C.G. H.G.
19.2 99.6 175.5 At2g32240 817784 - F:molecular_function unknown;P:response to cadmium ion;C:plasma membrane;MOBFPAV O.I. C.G. H.G.
19.2 99.6 100.6 At5g12010 831074 unknown protein F:unknown;P:response to salt stress;C:chloroplast, plasma membrane, membrane;MPFO O.I. C.G. H.G.
19.1 99.6 79.2 At2g02000 814731 GAD3 (glutamate decarboxylase 3) F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAV O.I. C.G. H.G.
18.6 99.5 97.5 At4g23570 828457 SGT1A Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance. O.I. C.G. H.G.
18.5 99.5 40.6 At3g48650 3769688 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
18.2 99.5 228.8 At2g22500 816783 UCP5 (UNCOUPLING PROTEIN 5) F:binding;P:transport, mitochondrial transport;C:mitochondrion, mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
18.2 99.5 179.4 At4g21990 828288 APR3 (APS REDUCTASE 3) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. O.I. C.G. H.G.
18.2 99.5 98.8 At3g14620 820690 CYP72A8 putative cytochrome P450 O.I. C.G. H.G.
17.9 99.5 79.9 At1g26380 839180 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM O.I. C.G. H.G.
17.6 99.5 84.6 At2g24600 816996 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. C.G. H.G.
17.5 99.5 86.5 At2g05940 815147 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
17.5 99.5 44.7 At4g23150 828414 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
17.4 99.5 166.5 At1g61890 842485 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
17.3 99.5 295.7 At5g35735 833550 auxin-responsive family protein F:unknown;P:unknown;C:plasma membrane, membrane;PMFOB O.I. C.G. H.G.
17.3 99.5 215.9 At5g52640 835341 ATHSP90.1 (HEAT SHOCK PROTEIN 90.1) Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. O.I. C.G. H.G.
17.2 99.5 78.2 At4g17230 827435 SCL13 (Scarecrow-like 13) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family. O.I. C.G. H.G.
17.2 99.5 65.9 At3g09830 820141 protein kinase, putative F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
17.1 99.5 252.8 At1g19180 838501 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. O.I. C.G. H.G.
17.1 99.5 65.6 At2g29460 817495 ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
17.1 99.5 15.8 At2g31230 817680 ATERF15 (Ethylene-responsive element binding factor 15) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
17.0 99.5 103.5 At5g43450 834365 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to ACC oxidase O.I. C.G. H.G.
17.0 99.5 88.7 At2g39660 818549 BIK1 (BOTRYTIS-INDUCED KINASE1) Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens. O.I. C.G. H.G.
17.0 99.5 55.1 At5g14700 831322 cinnamoyl-CoA reductase-related F:binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:cellular_component unknown;POBFMVA O.I. C.G. H.G.
16.9 99.5 84.3 At3g21230 821677 4CL5 (4-coumarate:CoA ligase 5) The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo. O.I. C.G. H.G.
16.9 99.5 45.3 At3g14200 820637 DNAJ heat shock N-terminal domain-containing protein F:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
16.9 99.5 21.6 At4g36030 829759 ARO3 (ARMADILLO REPEAT ONLY 3) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules. O.I. C.G. H.G.
16.8 99.5 322.2 At3g16530 820901 legume lectin family protein Lectin like protein whose expression is induced upon treatment with chitin oligomers. O.I. C.G. H.G.
16.8 99.5 35.8 At1g32870 840181 ANAC13 (Arabidopsis thaliana NAC domain protein 13) F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMF O.I. C.G. H.G.
16.8 99.5 21.4 At2g14290 815916 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
196.1	100.0	427.8	At1g77490	844085	TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)	Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.	O.I.	C.G.	H.G.
100.0	99.9	258.3	At1g51760	841602	IAR3 (IAA-ALANINE RESISTANT 3)	encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.	O.I.	C.G.	H.G.
77.3	99.9	104.7	At1g66090	842923	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PBOMF	O.I.	C.G.	H.G.
73.4	99.9	129.7	At5g50570	835126	squamosa promoter-binding protein, putative	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM	O.I.	C.G.	H.G.
68.7	99.9	114.5	At1g01560	839523	ATMPK11	member of MAP Kinase	O.I.	C.G.	H.G.
56.2	99.8	93.5	At1g61120	842405	TPS04 (TERPENE SYNTHASE 04)	Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.	O.I.	C.G.	H.G.
43.2	99.8	184.5	At1g05680	837075	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
41.8	99.8	197.3	At4g37370	829891	CYP81D8	member of CYP81D	O.I.	C.G.	H.G.
40.5	99.8	326.5	At2g06050	815160	OPR3 (OPDA-REDUCTASE 3)	Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence.	O.I.	C.G.	H.G.
39.7	99.8	14.8	At1g43000	840898	zinc-binding family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
38.9	99.8	131.3	At5g51440	835218	23.5 kDa mitochondrial small heat shock protein (HSP23.5-M)	F:molecular_function unknown;P:response to heat;C:unknown;BPOAFM	O.I.	C.G.	H.G.
38.4	99.8	149.4	At4g23140	828413	CRK6 (CYSTEINE-RICH RLK 6)	Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)	O.I.	C.G.	H.G.
38.0	99.8	82.4	At3g25610	822148	haloacid dehalogenase-like hydrolase family protein	F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAV	O.I.	C.G.	H.G.
37.5	99.7	15.7	At4g04510	825781	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
37.4	99.7	29.6	At3g21070	821659	NADK1 (NAD KINASE 1)	Encodes a protein with NAD(H) kinase activity.	O.I.	C.G.	H.G.
37.4	99.7	14.6	At1g61610	842457	S-locus lectin protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
35.1	99.7	130.1	At1g17380	838310	JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5)	F:molecular_function unknown;P:response to jasmonic acid stimulus;C:cellular_component unknown;P	O.I.	C.G.	H.G.
35.0	99.7	319.6	At2g24850	817022	TAT3 (TYROSINE AMINOTRANSFERASE 3)	Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.	O.I.	C.G.	H.G.
34.1	99.7	139.8	At1g72520	843584	lipoxygenase, putative	F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth, jasmonic acid biosynthetic process, response to wounding, defense response;C:chloroplast;PMBFO	O.I.	C.G.	H.G.
33.9	99.7	390.7	At4g01870	828228	tolB protein-related	F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;OBPFAM	O.I.	C.G.	H.G.
33.0	99.7	263.4	At4g27410	828849	RD26 (RESPONSIVE TO DESICCATION 26)	Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.	O.I.	C.G.	H.G.
32.2	99.7	162.2	At3g09350	820091	armadillo/beta-catenin repeat family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
30.4	99.7	290.6	At4g14365	827080	zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
29.7	99.7	123.5	At4g39640	830118	GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1)	The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.	O.I.	C.G.	H.G.
29.6	99.7	156.6	At5g54170	835505	-	F:molecular_function unknown;P:response to wounding;C:unknown;MPO	O.I.	C.G.	H.G.
29.5	99.7	62.8	At4g35600	829712	CONNEXIN 32	plant-type connexin (gap junction-type protein), a component of plasmodesmata	O.I.	C.G.	H.G.
28.3	99.7	93.4	At1g74710	843810	isochorismate synthase 1 (ICS1) / isochorismate mutase	Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).	O.I.	C.G.	H.G.
28.0	99.7	94.9	At5g53050	835385	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOMPFAV	O.I.	C.G.	H.G.
28.0	99.7	24.7	At1g16420	838212	MC8 (METACASPASE 8)	Encodes a metacaspase (cysteine-type endopeptidase) that is involved in promoting programmed cell death in response to hydrogen peroxide (H2O2), UV light, and methyl viologen (MV). Transcript levels rise in response to UV-C, H2O2, and MV. In vitro assays demonstrate that this enzyme has a preference for cleaving after an arginine residue, and it has a pH optimum of 8.0.	O.I.	C.G.	H.G.
27.3	99.7	45.8	At4g23220	828421	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
26.1	99.7	44.6	At5g54300	835518	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBA	O.I.	C.G.	H.G.
25.6	99.7	242.7	At1g55450	841992	embryo-abundant protein-related	F:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOA	O.I.	C.G.	H.G.
25.4	99.6	143.1	At3g51450	824308	strictosidine synthase family protein	F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAF	O.I.	C.G.	H.G.
25.4	99.6	50.1	At4g21390	827891	B120	F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
25.3	99.6	26.7	At1g24150	839028	FH4 (FORMIN HOMOLOGUE 4)	Encodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin.	O.I.	C.G.	H.G.
25.2	99.6	140.7	At3g06500	819828	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	F:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPB	O.I.	C.G.	H.G.
24.7	99.6	131.7	At4g05020	825844	NDB2 (NAD(P)H dehydrogenase B2)	F:disulfide oxidoreductase activity, oxidoreductase activity, FAD binding;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion;BOFPAM	O.I.	C.G.	H.G.
24.5	99.6	184.1	At3g44860	823620	FAMT (farnesoic acid carboxyl-O-methyltransferase)	Encodes a farnesoic acid carboxyl-O-methyltransferase.	O.I.	C.G.	H.G.
24.2	99.6	43.5	At5g60800	836201	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA	O.I.	C.G.	H.G.
24.1	99.6	28.5	At3g46110	823754	unknown protein	F:unknown;P:unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
23.9	99.6	31.6	At4g23190	828418	CRK11 (CYSTEINE-RICH RLK11)	Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)	O.I.	C.G.	H.G.
23.6	99.6	70.9	At5g62570	836377	calmodulin-binding protein	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
23.4	99.6	59.0	At5g47730	834824	SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative	F:transporter activity, binding;P:transport;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
23.4	99.6	38.3	At4g16890	827397	SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1)	Encodes a Toll Interleukin1 receptor-nucleotide binding-Leu- rich repeat-type resistance gene (TIR-NB-LRR-type) involved in the salicylic acid-dependent defense response pathway. Mutant plants constitutively express pathogenesis-related (PR) genes and are pathogen resistant. Resistance signaling in snc1 requires EDS1, MOS3 and PAD4.	O.I.	C.G.	H.G.
22.9	99.6	122.1	At1g44350	841026	ILL6	encodes a protein similar to IAA amino acid conjugate hydrolase.	O.I.	C.G.	H.G.
22.7	99.6	165.8	At1g74310	843771	ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101)	Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.	O.I.	C.G.	H.G.
22.5	99.6	50.8	At3g48090	823964	EDS1 (enhanced disease susceptibility 1)	Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.	O.I.	C.G.	H.G.
22.2	99.6	130.3	At2g37940	818371	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOP	O.I.	C.G.	H.G.
22.2	99.6	35.1	At2g25140	817052	CLPB4 (CASEIN LYTIC PROTEINASE B4)	Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.	O.I.	C.G.	H.G.
21.8	99.6	184.4	At1g72450	843577	JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)	JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation.	O.I.	C.G.	H.G.
21.7	99.6	193.0	At2g29450	817494	ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)	Encodes a member of the TAU glutathione S-transferase gene family. Gene expression is induced by exposure to auxin, pathogen and herbicides. Naming convention according to Wagner et al. (2002)	O.I.	C.G.	H.G.
21.5	99.6	26.6	At4g10390	826631	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:response to wounding;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
21.5	99.6	14.6	At4g38560	830013	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAFV	O.I.	C.G.	H.G.
21.4	99.6	147.6	At3g26830	822298	PAD3 (PHYTOALEXIN DEFICIENT 3)	Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.	O.I.	C.G.	H.G.
21.3	99.6	153.1	At1g52890	841722	ANAC019 (Arabidopsis NAC domain containing protein 19)	encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.	O.I.	C.G.	H.G.
21.1	99.6	63.0	At5g01540	831722	LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1)	Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.	O.I.	C.G.	H.G.
21.1	99.6	17.4	At4g22980	828397	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBA	O.I.	C.G.	H.G.
21.0	99.6	30.3	At4g04490	825779	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
20.7	99.6	262.7	At3g22370	821806	AOX1A (ALTERNATIVE OXIDASE 1A)	Encodes an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited.	O.I.	C.G.	H.G.
20.7	99.6	103.3	At1g17420	838314	LOX3	Lipoxygenase	O.I.	C.G.	H.G.
20.6	99.6	12.6	At1g69610	843297	structural constituent of ribosome	F:structural constituent of ribosome;P:N-terminal protein myristoylation, translation;C:ribosome, intracellular;OPMFB	O.I.	C.G.	H.G.
20.4	99.6	22.3	At1g72280	843560	AERO1 (Arabidopsis endoplasmic reticulum oxidoreductins 1)	endoplasmic reticulum oxidoreductin	O.I.	C.G.	H.G.
20.3	99.6	124.6	At1g73480	843683	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOPMFVA	O.I.	C.G.	H.G.
20.2	99.6	194.8	At4g33050	829442	EDA39 (embryo sac development arrest 39)	F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
20.0	99.6	65.1	At5g47070	834753	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
19.9	99.6	83.6	At4g18880	827622	AT-HSFA4A	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
19.6	99.6	151.1	At4g39670	830121	glycolipid binding / glycolipid transporter	F:glycolipid transporter activity, glycolipid binding;P:glycolipid transport;C:cytoplasm;MPOF	O.I.	C.G.	H.G.
19.4	99.6	362.5	At3g57260	824893	BGL2 (BETA-1,3-GLUCANASE 2)	beta 1,3-glucanase	O.I.	C.G.	H.G.
19.4	99.6	130.2	At1g20510	838639	OPCL1 (OPC-8:0 COA LIGASE1)	F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding;C:peroxisome;BOFMPAV	O.I.	C.G.	H.G.
19.3	99.6	65.0	At1g66880	843006	serine/threonine protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
19.3	99.6	41.2	At2g46510	819262	ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)	Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.	O.I.	C.G.	H.G.
19.2	99.6	175.5	At2g32240	817784	-	F:molecular_function unknown;P:response to cadmium ion;C:plasma membrane;MOBFPAV	O.I.	C.G.	H.G.
19.2	99.6	100.6	At5g12010	831074	unknown protein	F:unknown;P:response to salt stress;C:chloroplast, plasma membrane, membrane;MPFO	O.I.	C.G.	H.G.
19.1	99.6	79.2	At2g02000	814731	GAD3 (glutamate decarboxylase 3)	F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAV	O.I.	C.G.	H.G.
18.6	99.5	97.5	At4g23570	828457	SGT1A	Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance.	O.I.	C.G.	H.G.
18.5	99.5	40.6	At3g48650	3769688	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
18.2	99.5	228.8	At2g22500	816783	UCP5 (UNCOUPLING PROTEIN 5)	F:binding;P:transport, mitochondrial transport;C:mitochondrion, mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
18.2	99.5	179.4	At4g21990	828288	APR3 (APS REDUCTASE 3)	Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.	O.I.	C.G.	H.G.
18.2	99.5	98.8	At3g14620	820690	CYP72A8	putative cytochrome P450	O.I.	C.G.	H.G.
17.9	99.5	79.9	At1g26380	839180	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM	O.I.	C.G.	H.G.
17.6	99.5	84.6	At2g24600	816996	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	C.G.	H.G.
17.5	99.5	86.5	At2g05940	815147	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
17.5	99.5	44.7	At4g23150	828414	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
17.4	99.5	166.5	At1g61890	842485	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
17.3	99.5	295.7	At5g35735	833550	auxin-responsive family protein	F:unknown;P:unknown;C:plasma membrane, membrane;PMFOB	O.I.	C.G.	H.G.
17.3	99.5	215.9	At5g52640	835341	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.	O.I.	C.G.	H.G.
17.2	99.5	78.2	At4g17230	827435	SCL13 (Scarecrow-like 13)	Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.	O.I.	C.G.	H.G.
17.2	99.5	65.9	At3g09830	820141	protein kinase, putative	F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
17.1	99.5	252.8	At1g19180	838501	JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)	JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.	O.I.	C.G.	H.G.
17.1	99.5	65.6	At2g29460	817495	ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
17.1	99.5	15.8	At2g31230	817680	ATERF15 (Ethylene-responsive element binding factor 15)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
17.0	99.5	103.5	At5g43450	834365	2-oxoglutarate-dependent dioxygenase, putative	encodes a protein whose sequence is similar to ACC oxidase	O.I.	C.G.	H.G.
17.0	99.5	88.7	At2g39660	818549	BIK1 (BOTRYTIS-INDUCED KINASE1)	Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.	O.I.	C.G.	H.G.
17.0	99.5	55.1	At5g14700	831322	cinnamoyl-CoA reductase-related	F:binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:cellular_component unknown;POBFMVA	O.I.	C.G.	H.G.
16.9	99.5	84.3	At3g21230	821677	4CL5 (4-coumarate:CoA ligase 5)	The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.	O.I.	C.G.	H.G.
16.9	99.5	45.3	At3g14200	820637	DNAJ heat shock N-terminal domain-containing protein	F:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
16.9	99.5	21.6	At4g36030	829759	ARO3 (ARMADILLO REPEAT ONLY 3)	Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.	O.I.	C.G.	H.G.
16.8	99.5	322.2	At3g16530	820901	legume lectin family protein	Lectin like protein whose expression is induced upon treatment with chitin oligomers.	O.I.	C.G.	H.G.
16.8	99.5	35.8	At1g32870	840181	ANAC13 (Arabidopsis thaliana NAC domain protein 13)	F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
16.8	99.5	21.4	At2g14290	815916	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.

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GSM ID	GSM272992
Assay name	flu over-tAPX 14-2, biological rep2
GSE experiment	GSE10812: Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves

Microarray experiments to specifically-expressed genes

GSM ID GSM272992 Assay name flu over-tAPX 14-2, biological rep2 GSE experiment GSE10812: Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves

GSM ID GSM272992

Assay name flu over-tAPX 14-2, biological rep2

GSE experiment GSE10812: Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves