CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM270870

Assay name Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3

GSE experiment GSE10719: Response of Arabidopsis cell culture to phytoprostane A1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1953.2 100.0 145.3 At5g67010 836836 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. O.I. C.G. H.G.
1698.7 100.0 107.3 At3g14300 820650 ATPMEPCRC F:pectinesterase activity;P:cell wall modification;C:cell wall;PBFMA O.I. C.G. H.G.
1487.6 100.0 96.2 At1g60180 842313 - pseudogene of F-box family protein O.I. C.G. H.G.
1167.0 100.0 185.9 At1g79400 844278 ATCHX2 (CATION/H+ EXCHANGER 2) member of Putative Na+/H+ antiporter family O.I. C.G. H.G.
1124.1 100.0 57.9 At1g33500 840244 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
1022.7 100.0 101.0 At4g31615 829289 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PB O.I. C.G. H.G.
980.9 100.0 83.7 At5g53680 835449 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFB O.I. C.G. H.G.
876.1 100.0 157.0 At5g01180 831725 PTR5 (PEPTIDE TRANSPORTER 5) Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane. O.I. C.G. H.G.
862.1 100.0 53.8 At1g49250 841349 ATP dependent DNA ligase family protein F:DNA binding, DNA ligase (ATP) activity, ATP binding;P:DNA repair, DNA recombination, DNA replication;C:cellular_component unknown;BOMFAVP O.I. C.G. H.G.
835.2 100.0 159.7 At3g09520 820109 ATEXO70H4 (exocyst subunit EXO70 family protein H4) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
742.2 100.0 224.2 At3g09640 820121 APX2 (ASCORBATE PEROXIDASE 2) Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. O.I. C.G. H.G.
735.1 100.0 135.1 At3g11370 820309 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PFOM O.I. C.G. H.G.
702.5 100.0 52.5 At4g28560 828974 RIC7 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 7) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC6 and RIC8 (subfamily group II). Gene is expressed in all tissues examined. O.I. C.G. H.G.
700.1 100.0 70.9 At5g17320 831598 HDG9 (HOMEODOMAIN GLABROUS 9) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. O.I. C.G. H.G.
697.8 100.0 269.0 At4g29640 829085 cytidine deaminase, putative / cytidine aminohydrolase, putative F:hydrolase activity, cytidine deaminase activity, catalytic activity, zinc ion binding;P:cytidine deamination, cytidine metabolic process;C:cellular_component unknown;BPO O.I. C.G. H.G.
677.6 100.0 44.3 At3g12420 820421 nucleic acid binding F:nucleic acid binding;P:unknown;C:unknown O.I. C.G. H.G.
643.8 100.0 86.3 At4g17250 827439 unknown protein F:molecular_function unknown;P:heat acclimation;C:cellular_component unknown;P O.I. C.G. H.G.
641.5 100.0 123.0 At1g63250 842631 DEAD box RNA helicase, putative F:helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
625.5 100.0 341.5 At1g31335 840022 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
608.2 100.0 81.4 At4g26820 828789 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
607.5 100.0 54.1 At5g48550 834911 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
591.6 100.0 36.3 At3g21800 821734 UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 4'-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBOF O.I. C.G. H.G.
569.7 100.0 444.4 At4g27670 828881 HSP21 (HEAT SHOCK PROTEIN 21) chloroplast located small heat shock protein. O.I. C.G. H.G.
513.0 100.0 390.2 At4g21320 827880 HSA32 (HEAT-STRESS-ASSOCIATED 32) Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment. O.I. C.G. H.G.
510.3 100.0 92.2 At1g65760 842887 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
497.5 100.0 448.8 At1g52560 841687 26.5 kDa class I small heat shock protein-like (HSP26.5-P) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMV O.I. C.G. H.G.
472.5 100.0 49.9 At4g13960 827030 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
455.4 100.0 149.5 At4g24450 828547 PWD (PHOSPHOGLUCAN, WATER DIKINASE) F:kinase activity, ATP binding;P:phosphorylation;C:chloroplast envelope;BAPOF O.I. C.G. H.G.
453.9 100.0 159.5 At5g11100 830978 SYTD F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO O.I. C.G. H.G.
447.8 100.0 91.6 At5g23170 832381 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
415.1 100.0 83.6 At4g09970 826588 unknown protein F:unknown;P:unknown;C:chloroplast;PB O.I. C.G. H.G.
385.4 100.0 52.2 At4g33280 829464 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:vacuole;P O.I. C.G. H.G.
381.9 100.0 73.0 At1g58150 842182 unknown protein F:molecular_function unknown;P:in 9 processes;C:cellular_component unknown;P O.I. C.G. H.G.
365.6 100.0 41.6 At3g20980 821649 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO O.I. C.G. H.G.
357.2 100.0 343.8 At5g37670 833746 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) F:molecular_function unknown;P:response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
354.3 100.0 350.4 At3g28210 822447 PMZ Encodes a putative zinc finger protein (PMZ). O.I. C.G. H.G.
349.8 100.0 139.6 At4g13950 827029 RALFL31 (ralf-like 31) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. O.I. C.G. H.G.
339.6 100.0 55.2 At1g44414 841028 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
331.2 100.0 160.6 At4g25450 828650 ATNAP8 member of NAP subfamily O.I. C.G. H.G.
329.4 100.0 82.6 At1g32660 840160 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
320.1 100.0 299.6 At2g44460 819053 BGLU28 (BETA GLUCOSIDASE 28) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFA O.I. C.G. H.G.
310.6 100.0 452.6 At4g10250 826616 ATHSP22.0 Columbia endomembrane-localized small heat shock protein O.I. C.G. H.G.
273.3 100.0 164.2 At1g02260 839344 transmembrane protein, putative F:citrate transmembrane transporter activity, transporter activity;P:citrate transport;C:endomembrane system, integral to membrane;BOMAPFV O.I. C.G. H.G.
268.6 100.0 24.6 At4g07850 3770287 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
265.3 100.0 54.8 At1g65550 842866 xanthine/uracil permease family protein F:transmembrane transporter activity;P:transport;C:membrane;BOMPFAV O.I. C.G. H.G.
265.1 100.0 39.6 At3g28350 822464 - Pseudogene of AT3G28350; unknown protein O.I. C.G. H.G.
258.3 100.0 468.7 At5g59720 836093 HSP18.2 (heat shock protein 18.2) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock. O.I. C.G. H.G.
254.9 100.0 72.2 At1g78950 844234 beta-amyrin synthase, putative F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMA O.I. C.G. H.G.
246.2 100.0 30.7 At5g38035 3771352 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
240.8 100.0 60.2 At1g12030 837755 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
235.6 100.0 93.7 At2g40570 818652 initiator tRNA phosphoribosyl transferase family protein F:transferase activity, transferring pentosyl groups;P:regulation of translation;C:cellular_component unknown;FPO O.I. C.G. H.G.
208.4 100.0 74.2 At1g72660 843598 developmentally regulated GTP-binding protein, putative F:GTP binding;P:unknown;C:intracellular;BOMAFP O.I. C.G. H.G.
205.8 100.0 393.4 At5g12020 831075 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM O.I. C.G. H.G.
203.3 100.0 269.4 At4g12400 826849 stress-inducible protein, putative F:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAV O.I. C.G. H.G.
194.8 100.0 33.2 At5g63690 836489 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOA O.I. C.G. H.G.
190.6 100.0 508.2 At1g16030 838174 Hsp70b (heat shock protein 70B) F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVA O.I. C.G. H.G.
183.0 100.0 35.0 At2g38520 3767738 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
180.8 100.0 578.0 At5g12030 831076 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. O.I. C.G. H.G.
179.4 100.0 85.4 At3g21360 821690 electron carrier/ oxidoreductase F:electron carrier activity, oxidoreductase activity;P:biological_process unknown;C:nucleus;BOMPF O.I. C.G. H.G.
177.4 100.0 163.4 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO O.I. C.G. H.G.
177.4 100.0 55.8 At1g66510 842969 AAR2 protein family F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPB O.I. C.G. H.G.
175.9 100.0 245.0 At4g09150 826496 T-complex protein 11 F:phosphopantetheine binding;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
174.8 100.0 345.0 At4g25200 828623 ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6) AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial O.I. C.G. H.G.
167.1 100.0 47.1 At2g01460 814674 ATP binding / kinase F:kinase activity, ATP binding;P:biosynthetic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
164.7 100.0 292.8 At4g31860 829315 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVA O.I. C.G. H.G.
162.9 99.9 82.2 At1g32330 840125 ATHSFA1D member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
160.6 99.9 185.2 At4g15420 827213 PRLI-interacting factor K F:peptidase activity, zinc ion binding;P:proteolysis, ubiquitin-dependent protein catabolic process;C:intracellular;MOFPB O.I. C.G. H.G.
154.9 99.9 59.7 At4g29770 829099 - Target of trans acting-siR480/255. O.I. C.G. H.G.
154.8 99.9 98.2 At4g31240 829251 - F:unknown;P:cell redox homeostasis;C:cellular_component unknown;OMBP O.I. C.G. H.G.
154.3 99.9 485.3 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
150.1 99.9 26.3 At3g56250 824791 unknown protein F:unknown;P:unknown;C:unknown;OFMPB O.I. C.G. H.G.
148.0 99.9 467.8 At1g53540 841789 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM O.I. C.G. H.G.
147.8 99.9 199.6 At1g03070 839581 glutamate binding F:glutamate binding;P:biological_process unknown;C:cellular_component unknown;BOMPFV O.I. C.G. H.G.
145.1 99.9 232.3 At1g19610 838548 PDF1.4 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. C.G. H.G.
144.8 99.9 351.0 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF O.I. C.G. H.G.
138.9 99.9 52.7 At1g63040 3767616 - a pseudogene member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The translated product contains one AP2 domain. There are 17 members in this subfamily including TINY. O.I. C.G. H.G.
134.1 99.9 176.5 At4g03320 827972 tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV) F:unknown;P:unknown;C:unknown;PB O.I. C.G. H.G.
131.0 99.9 144.1 At2g46880 819301 PAP14 (PURPLE ACID PHOSPHATASE 14) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO O.I. C.G. H.G.
130.9 99.9 574.0 At3g46230 823768 ATHSP17.4 member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds O.I. C.G. H.G.
128.5 99.9 265.6 At2g32120 817771 HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2) F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAV O.I. C.G. H.G.
127.0 99.9 402.2 At2g02990 814828 RNS1 (RIBONUCLEASE 1) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. O.I. C.G. H.G.
126.6 99.9 479.8 At1g07400 837252 17.8 kDa class I heat shock protein (HSP17.8-CI) F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
122.6 99.9 31.1 At1g23900 839001 GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1) Encodes large subunit of the heterotetrameric adaptor protein complex AP-1. AP-1 is required for clathrin coated vesicles budding from the trans-Golgi network or plasma membrane O.I. C.G. H.G.
121.8 99.9 282.7 At5g25450 832619 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFO O.I. C.G. H.G.
121.2 99.9 32.0 At4g23000 828399 hydrolase/ protein serine/threonine phosphatase F:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:cellular_component unknown;BPO O.I. C.G. H.G.
120.4 99.9 26.9 At4g13700 827004 PAP23 (PURPLE ACID PHOSPHATASE 23) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFA O.I. C.G. H.G.
120.3 99.9 296.4 At2g22240 816757 MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2) ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization. O.I. C.G. H.G.
120.2 99.9 23.9 At2g40500 818645 protein kinase family protein F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVA O.I. C.G. H.G.
119.3 99.9 182.4 At1g68140 843142 - F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
118.0 99.9 65.1 At4g28350 828950 lectin protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
116.5 99.9 102.5 At5g16980 831561 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPA O.I. C.G. H.G.
115.9 99.9 71.6 At2g04890 815036 SCL21 (SCARECROW-LIKE 21) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family. O.I. C.G. H.G.
110.6 99.9 319.4 At2g47180 819331 AtGolS1 (Arabidopsis thaliana galactinol synthase 1) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBO O.I. C.G. H.G.
110.2 99.9 87.7 At3g28150 822439 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
109.1 99.9 39.9 At1g75620 843897 glyoxal oxidase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPO O.I. C.G. H.G.
107.7 99.9 216.8 At1g30070 839886 SGS domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPF O.I. C.G. H.G.
103.1 99.9 359.3 At5g48570 834913 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPA O.I. C.G. H.G.
102.8 99.9 121.8 At3g47780 823932 ATATH6 member of ATH subfamily O.I. C.G. H.G.
101.4 99.9 219.8 At5g11680 831040 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cytosol, plasma membrane;MOFP O.I. C.G. H.G.
100.1 99.9 79.8 At3g08970 820049 ATERDJ3A J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
1953.2	100.0	145.3	At5g67010	836836	AP2 domain-containing transcription factor, putative	encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.	O.I.	C.G.	H.G.
1698.7	100.0	107.3	At3g14300	820650	ATPMEPCRC	F:pectinesterase activity;P:cell wall modification;C:cell wall;PBFMA	O.I.	C.G.	H.G.
1487.6	100.0	96.2	At1g60180	842313	-	pseudogene of F-box family protein	O.I.	C.G.	H.G.
1167.0	100.0	185.9	At1g79400	844278	ATCHX2 (CATION/H+ EXCHANGER 2)	member of Putative Na+/H+ antiporter family	O.I.	C.G.	H.G.
1124.1	100.0	57.9	At1g33500	840244	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
1022.7	100.0	101.0	At4g31615	829289	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
980.9	100.0	83.7	At5g53680	835449	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFB	O.I.	C.G.	H.G.
876.1	100.0	157.0	At5g01180	831725	PTR5 (PEPTIDE TRANSPORTER 5)	Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.	O.I.	C.G.	H.G.
862.1	100.0	53.8	At1g49250	841349	ATP dependent DNA ligase family protein	F:DNA binding, DNA ligase (ATP) activity, ATP binding;P:DNA repair, DNA recombination, DNA replication;C:cellular_component unknown;BOMFAVP	O.I.	C.G.	H.G.
835.2	100.0	159.7	At3g09520	820109	ATEXO70H4 (exocyst subunit EXO70 family protein H4)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
742.2	100.0	224.2	At3g09640	820121	APX2 (ASCORBATE PEROXIDASE 2)	Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.	O.I.	C.G.	H.G.
735.1	100.0	135.1	At3g11370	820309	DC1 domain-containing protein	F:unknown;P:unknown;C:cellular_component unknown;PFOM	O.I.	C.G.	H.G.
702.5	100.0	52.5	At4g28560	828974	RIC7 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 7)	encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC6 and RIC8 (subfamily group II). Gene is expressed in all tissues examined.	O.I.	C.G.	H.G.
700.1	100.0	70.9	At5g17320	831598	HDG9 (HOMEODOMAIN GLABROUS 9)	Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.	O.I.	C.G.	H.G.
697.8	100.0	269.0	At4g29640	829085	cytidine deaminase, putative / cytidine aminohydrolase, putative	F:hydrolase activity, cytidine deaminase activity, catalytic activity, zinc ion binding;P:cytidine deamination, cytidine metabolic process;C:cellular_component unknown;BPO	O.I.	C.G.	H.G.
677.6	100.0	44.3	At3g12420	820421	nucleic acid binding	F:nucleic acid binding;P:unknown;C:unknown	O.I.	C.G.	H.G.
643.8	100.0	86.3	At4g17250	827439	unknown protein	F:molecular_function unknown;P:heat acclimation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
641.5	100.0	123.0	At1g63250	842631	DEAD box RNA helicase, putative	F:helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
625.5	100.0	341.5	At1g31335	840022	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
608.2	100.0	81.4	At4g26820	828789	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
607.5	100.0	54.1	At5g48550	834911	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
591.6	100.0	36.3	At3g21800	821734	UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8)	F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 4'-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBOF	O.I.	C.G.	H.G.
569.7	100.0	444.4	At4g27670	828881	HSP21 (HEAT SHOCK PROTEIN 21)	chloroplast located small heat shock protein.	O.I.	C.G.	H.G.
513.0	100.0	390.2	At4g21320	827880	HSA32 (HEAT-STRESS-ASSOCIATED 32)	Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment.	O.I.	C.G.	H.G.
510.3	100.0	92.2	At1g65760	842887	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
497.5	100.0	448.8	At1g52560	841687	26.5 kDa class I small heat shock protein-like (HSP26.5-P)	F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMV	O.I.	C.G.	H.G.
472.5	100.0	49.9	At4g13960	827030	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
455.4	100.0	149.5	At4g24450	828547	PWD (PHOSPHOGLUCAN, WATER DIKINASE)	F:kinase activity, ATP binding;P:phosphorylation;C:chloroplast envelope;BAPOF	O.I.	C.G.	H.G.
453.9	100.0	159.5	At5g11100	830978	SYTD	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
447.8	100.0	91.6	At5g23170	832381	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
415.1	100.0	83.6	At4g09970	826588	unknown protein	F:unknown;P:unknown;C:chloroplast;PB	O.I.	C.G.	H.G.
385.4	100.0	52.2	At4g33280	829464	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:vacuole;P	O.I.	C.G.	H.G.
381.9	100.0	73.0	At1g58150	842182	unknown protein	F:molecular_function unknown;P:in 9 processes;C:cellular_component unknown;P	O.I.	C.G.	H.G.
365.6	100.0	41.6	At3g20980	821649	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO	O.I.	C.G.	H.G.
357.2	100.0	343.8	At5g37670	833746	15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)	F:molecular_function unknown;P:response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
354.3	100.0	350.4	At3g28210	822447	PMZ	Encodes a putative zinc finger protein (PMZ).	O.I.	C.G.	H.G.
349.8	100.0	139.6	At4g13950	827029	RALFL31 (ralf-like 31)	Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.	O.I.	C.G.	H.G.
339.6	100.0	55.2	At1g44414	841028	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
331.2	100.0	160.6	At4g25450	828650	ATNAP8	member of NAP subfamily	O.I.	C.G.	H.G.
329.4	100.0	82.6	At1g32660	840160	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
320.1	100.0	299.6	At2g44460	819053	BGLU28 (BETA GLUCOSIDASE 28)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFA	O.I.	C.G.	H.G.
310.6	100.0	452.6	At4g10250	826616	ATHSP22.0	Columbia endomembrane-localized small heat shock protein	O.I.	C.G.	H.G.
273.3	100.0	164.2	At1g02260	839344	transmembrane protein, putative	F:citrate transmembrane transporter activity, transporter activity;P:citrate transport;C:endomembrane system, integral to membrane;BOMAPFV	O.I.	C.G.	H.G.
268.6	100.0	24.6	At4g07850	3770287	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
265.3	100.0	54.8	At1g65550	842866	xanthine/uracil permease family protein	F:transmembrane transporter activity;P:transport;C:membrane;BOMPFAV	O.I.	C.G.	H.G.
265.1	100.0	39.6	At3g28350	822464	-	Pseudogene of AT3G28350; unknown protein	O.I.	C.G.	H.G.
258.3	100.0	468.7	At5g59720	836093	HSP18.2 (heat shock protein 18.2)	encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.	O.I.	C.G.	H.G.
254.9	100.0	72.2	At1g78950	844234	beta-amyrin synthase, putative	F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMA	O.I.	C.G.	H.G.
246.2	100.0	30.7	At5g38035	3771352	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
240.8	100.0	60.2	At1g12030	837755	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
235.6	100.0	93.7	At2g40570	818652	initiator tRNA phosphoribosyl transferase family protein	F:transferase activity, transferring pentosyl groups;P:regulation of translation;C:cellular_component unknown;FPO	O.I.	C.G.	H.G.
208.4	100.0	74.2	At1g72660	843598	developmentally regulated GTP-binding protein, putative	F:GTP binding;P:unknown;C:intracellular;BOMAFP	O.I.	C.G.	H.G.
205.8	100.0	393.4	At5g12020	831075	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	O.I.	C.G.	H.G.
203.3	100.0	269.4	At4g12400	826849	stress-inducible protein, putative	F:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAV	O.I.	C.G.	H.G.
194.8	100.0	33.2	At5g63690	836489	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOA	O.I.	C.G.	H.G.
190.6	100.0	508.2	At1g16030	838174	Hsp70b (heat shock protein 70B)	F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVA	O.I.	C.G.	H.G.
183.0	100.0	35.0	At2g38520	3767738	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
180.8	100.0	578.0	At5g12030	831076	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.	O.I.	C.G.	H.G.
179.4	100.0	85.4	At3g21360	821690	electron carrier/ oxidoreductase	F:electron carrier activity, oxidoreductase activity;P:biological_process unknown;C:nucleus;BOMPF	O.I.	C.G.	H.G.
177.4	100.0	163.4	At2g45130	819120	SPX3 (SPX DOMAIN GENE 3)	F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO	O.I.	C.G.	H.G.
177.4	100.0	55.8	At1g66510	842969	AAR2 protein family	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPB	O.I.	C.G.	H.G.
175.9	100.0	245.0	At4g09150	826496	T-complex protein 11	F:phosphopantetheine binding;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
174.8	100.0	345.0	At4g25200	828623	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial	O.I.	C.G.	H.G.
167.1	100.0	47.1	At2g01460	814674	ATP binding / kinase	F:kinase activity, ATP binding;P:biosynthetic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
164.7	100.0	292.8	At4g31860	829315	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVA	O.I.	C.G.	H.G.
162.9	99.9	82.2	At1g32330	840125	ATHSFA1D	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
160.6	99.9	185.2	At4g15420	827213	PRLI-interacting factor K	F:peptidase activity, zinc ion binding;P:proteolysis, ubiquitin-dependent protein catabolic process;C:intracellular;MOFPB	O.I.	C.G.	H.G.
154.9	99.9	59.7	At4g29770	829099	-	Target of trans acting-siR480/255.	O.I.	C.G.	H.G.
154.8	99.9	98.2	At4g31240	829251	-	F:unknown;P:cell redox homeostasis;C:cellular_component unknown;OMBP	O.I.	C.G.	H.G.
154.3	99.9	485.3	At2g29500	817499	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
150.1	99.9	26.3	At3g56250	824791	unknown protein	F:unknown;P:unknown;C:unknown;OFMPB	O.I.	C.G.	H.G.
148.0	99.9	467.8	At1g53540	841789	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	O.I.	C.G.	H.G.
147.8	99.9	199.6	At1g03070	839581	glutamate binding	F:glutamate binding;P:biological_process unknown;C:cellular_component unknown;BOMPFV	O.I.	C.G.	H.G.
145.1	99.9	232.3	At1g19610	838548	PDF1.4	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.	O.I.	C.G.	H.G.
144.8	99.9	351.0	At1g17710	838347	phosphatase	F:phosphatase activity;P:metabolic process;C:unknown;MPOBF	O.I.	C.G.	H.G.
138.9	99.9	52.7	At1g63040	3767616	-	a pseudogene member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The translated product contains one AP2 domain. There are 17 members in this subfamily including TINY.	O.I.	C.G.	H.G.
134.1	99.9	176.5	At4g03320	827972	tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)	F:unknown;P:unknown;C:unknown;PB	O.I.	C.G.	H.G.
131.0	99.9	144.1	At2g46880	819301	PAP14 (PURPLE ACID PHOSPHATASE 14)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO	O.I.	C.G.	H.G.
130.9	99.9	574.0	At3g46230	823768	ATHSP17.4	member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds	O.I.	C.G.	H.G.
128.5	99.9	265.6	At2g32120	817771	HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2)	F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAV	O.I.	C.G.	H.G.
127.0	99.9	402.2	At2g02990	814828	RNS1 (RIBONUCLEASE 1)	member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.	O.I.	C.G.	H.G.
126.6	99.9	479.8	At1g07400	837252	17.8 kDa class I heat shock protein (HSP17.8-CI)	F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
122.6	99.9	31.1	At1g23900	839001	GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1)	Encodes large subunit of the heterotetrameric adaptor protein complex AP-1. AP-1 is required for clathrin coated vesicles budding from the trans-Golgi network or plasma membrane	O.I.	C.G.	H.G.
121.8	99.9	282.7	At5g25450	832619	ubiquinol-cytochrome C reductase complex 14 kDa protein, putative	F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFO	O.I.	C.G.	H.G.
121.2	99.9	32.0	At4g23000	828399	hydrolase/ protein serine/threonine phosphatase	F:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:cellular_component unknown;BPO	O.I.	C.G.	H.G.
120.4	99.9	26.9	At4g13700	827004	PAP23 (PURPLE ACID PHOSPHATASE 23)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFA	O.I.	C.G.	H.G.
120.3	99.9	296.4	At2g22240	816757	MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2)	** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.	O.I.	C.G.	H.G.
120.2	99.9	23.9	At2g40500	818645	protein kinase family protein	F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVA	O.I.	C.G.	H.G.
119.3	99.9	182.4	At1g68140	843142	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
118.0	99.9	65.1	At4g28350	828950	lectin protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
116.5	99.9	102.5	At5g16980	831561	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPA	O.I.	C.G.	H.G.
115.9	99.9	71.6	At2g04890	815036	SCL21 (SCARECROW-LIKE 21)	Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.	O.I.	C.G.	H.G.
110.6	99.9	319.4	At2g47180	819331	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBO	O.I.	C.G.	H.G.
110.2	99.9	87.7	At3g28150	822439	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
109.1	99.9	39.9	At1g75620	843897	glyoxal oxidase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPO	O.I.	C.G.	H.G.
107.7	99.9	216.8	At1g30070	839886	SGS domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPF	O.I.	C.G.	H.G.
103.1	99.9	359.3	At5g48570	834913	peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative	F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPA	O.I.	C.G.	H.G.
102.8	99.9	121.8	At3g47780	823932	ATATH6	member of ATH subfamily	O.I.	C.G.	H.G.
101.4	99.9	219.8	At5g11680	831040	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cytosol, plasma membrane;MOFP	O.I.	C.G.	H.G.
100.1	99.9	79.8	At3g08970	820049	ATERDJ3A	J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.	O.I.	C.G.	H.G.

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GSM ID	GSM270870
Assay name	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3
GSE experiment	GSE10719: Response of Arabidopsis cell culture to phytoprostane A1

Microarray experiments to specifically-expressed genes

GSM ID GSM270870 Assay name Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE experiment GSE10719: Response of Arabidopsis cell culture to phytoprostane A1

GSM ID GSM270870

Assay name Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3

GSE experiment GSE10719: Response of Arabidopsis cell culture to phytoprostane A1