Microarray experiments to specifically-expressed genes

GSM ID GSM269832
Assay name T8 leaf-well watered-rep3
GSE experiment GSE10670: Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
66.999.8176.0At1g56600842114AtGolS2 (Arabidopsis thaliana galactinol synthase 2)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.C.G.H.G.
43.799.878.5At3g28540822484AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAVO.I.C.G.H.G.
34.699.719.6At2g32290817789BAM6 (BETA-AMYLASE 6)F:cation binding, beta-amylase activity, catalytic activity;P:cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process;C:chloroplast;PBOO.I.C.G.H.G.
31.099.737.3At5g52320835308CYP96A4member of CYP96AO.I.C.G.H.G.
28.999.765.9At3g49580824120LSU1 (RESPONSE TO LOW SULFUR 1)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
27.899.718.9At3g08870820035lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
26.499.7441.6At5g52310835307LTI78 (LOW-TEMPERATURE-INDUCED 78)cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expressionO.I.C.G.H.G.
26.099.777.4At1g73470843682unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPO.I.C.G.H.G.
25.299.640.3At4g18270827553ATTRANS11Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development.O.I.C.G.H.G.
23.899.637.4At5g59670836088leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
23.799.6362.6At3g46970823850PHS2 (ALPHA-GLUCAN PHOSPHORYLASE 2)Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.O.I.C.G.H.G.
23.699.627.3At1g33720840263CYP76C6member of CYP76CO.I.C.G.H.G.
22.999.685.3At1g68600843190unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPFOO.I.C.G.H.G.
22.899.644.3At5g59130836031subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
22.399.6141.7At1g70820843419phosphoglucomutase, putative / glucose phosphomutase, putativeF:intramolecular transferase activity, phosphotransferases;P:carbohydrate metabolic process;C:chloroplast;BOAMPFO.I.C.G.H.G.
22.199.655.6At5g50800835152nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOO.I.C.G.H.G.
21.599.664.6At5g19460832066atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)F:hydrolase activity;P:biological_process unknown;C:chloroplast;BFOMPO.I.C.G.H.G.
21.499.656.9At2g39930818580ISA1 (ISOAMYLASE 1)Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex.O.I.C.G.H.G.
21.399.650.9At4g16860827395RPP4 (recognition of peronospora parasitica 4)Confers resistance to Peronospora parasitica. RPP4 is coordinately regulated by transcriptional activation and RNA silencing.O.I.C.G.H.G.
20.499.617.2At2g150403768475-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
19.999.614.1At4g11840826790PLDGAMMA3member of C2-PLD subfamilyO.I.C.G.H.G.
19.899.6119.5At3g45860823729receptor-like protein kinase, putativeF:kinase activity;P:defense response;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
19.499.6163.9At3g44860823620FAMT (farnesoic acid carboxyl-O-methyltransferase)Encodes a farnesoic acid carboxyl-O-methyltransferase.O.I.C.G.H.G.
18.999.5149.6At3g52180824383SEX4 (STARCH-EXCESS 4)Encodes a plant-specific protein phosphatase that contains a protein tyrosine phosphatase (PTP) catalytic domain and a kinase interaction sequence (KIS) domain. This protein interacts with the plant SnRK AKIN11. Binds starch. Localized in the chloroplast.O.I.C.G.H.G.
18.199.592.2At5g48850834943ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.O.I.C.G.H.G.
17.899.564.9At1g64890842797integral membrane transporter family proteinF:transporter activity;P:transport;C:membrane;BOPMAFO.I.C.G.H.G.
17.399.567.1At4g27300828838S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
17.199.543.6At4g16770827383iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:peroxisome;POBFMO.I.C.G.H.G.
16.399.5159.7At2g32480817809membrane-associated zinc metalloprotease, putativeF:protein binding, metalloendopeptidase activity;P:proteolysis;C:chloroplast, plastid;BOPAMO.I.C.G.H.G.
16.199.5184.5At4g14400827085ACD6 (ACCELERATED CELL DEATH 6)encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.O.I.C.G.H.G.
16.099.5209.4At2g37710818348RLK (receptor lectin kinase)Induced in response to Salicylic acid.O.I.C.G.H.G.
15.799.524.5At1g29720839850protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
14.999.4185.4At4g19170827655NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4)chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenaseO.I.C.G.H.G.
14.999.463.6At3g56140824780unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid lumen, chloroplast;PBMOFVO.I.C.G.H.G.
14.199.4108.1At2g15050815994LTPPredicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.O.I.C.G.H.G.
14.099.4223.2At1g10760837619SEX1 (STARCH EXCESS 1)Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.O.I.C.G.H.G.
13.799.494.9At2g20570816579GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1)Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.O.I.C.G.H.G.
13.799.476.7At3g44450823570unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
13.799.472.1At2g01180814646ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.O.I.C.G.H.G.
13.799.465.9At4g25480828652DREB1A (DEHYDRATION RESPONSE ELEMENT B1A)encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.O.I.C.G.H.G.
13.599.444.7At5g35490833513unknown proteinEncodes MRU1 (mto 1 responding up). Up-regulated in mto1-1 mutant that over-accumulates soluble methionine.O.I.C.G.H.G.
13.499.449.1At5g53130835393CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)member of Cyclic nucleotide gated channel familyO.I.C.G.H.G.
13.099.441.0At5g13730831218SIG4 (SIGMA FACTOR 4)Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.O.I.C.G.H.G.
12.899.345.8At2g04066814942MATE efflux protein-relatedF:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;PBOFMO.I.C.G.H.G.
12.899.323.6At3g23110821886AtRLP37 (Receptor Like Protein 37)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
12.699.333.2At3g55760824742unknown proteinF:unknown;P:unknown;C:chloroplast stroma, chloroplast;POMFBO.I.C.G.H.G.
12.599.397.9At1g73480843683hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOPMFVAO.I.C.G.H.G.
12.399.372.6At1g20650838654ATP binding / protein kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
12.399.361.7At2g17040816209anac036 (Arabidopsis NAC domain containing protein 36)F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;PO.I.C.G.H.G.
12.399.351.6At4g13140--O.I.C.G.H.G.
12.299.372.8At1g07250837236UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4)F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
12.199.367.6At3g26290822232CYP71B26putative cytochrome P450O.I.C.G.H.G.
12.099.394.6At1g51805841607leucine-rich repeat protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
11.899.372.8At2g32160817775-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMOPO.I.C.G.H.G.
11.799.3401.6At3g15840820827PIFI (post-illumination chlorophyll fluorescence increase)Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.O.I.C.G.H.G.
11.799.3325.6At5g03350831863legume lectin family proteinF:carbohydrate binding, sugar binding;P:biological_process unknown;C:apoplast, cell wall, chloroplast;PBOO.I.C.G.H.G.
11.799.38.1At3g46370823783leucine-rich repeat protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAO.I.C.G.H.G.
11.699.363.9At4g18880827622AT-HSFA4Amember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
11.699.356.6At5g26220832691ChaC-like family proteinF:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFPO.I.C.G.H.G.
11.599.323.7At4g21380827890ARK3 (A. THALIANA RECEPTOR KINASE 3)encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.O.I.C.G.H.G.
11.199.253.3At5g58670835981PLC1 (PHOSPHOLIPASE C 1)phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one).O.I.C.G.H.G.
11.199.238.7At1g13750837935calcineurin-like phosphoesterase family proteinF:hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFO.I.C.G.H.G.
10.999.231.1At3g486503769688-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
10.899.258.6At2g46430819251ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3)cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistanceO.I.C.G.H.G.
10.899.240.2At2g38790818461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
10.799.251.0At1g57590842135carboxylesteraseF:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOBO.I.C.G.H.G.
10.699.229.3At4g23990828499ATCSLG3encodes a protein similar to cellulose synthaseO.I.C.G.H.G.
10.599.2419.5At5g25610832636RD22responsive to dehydration 22 (RD22) mediated by ABAO.I.C.G.H.G.
10.599.2184.1At1g67870843115glycine-rich proteinF:unknown;P:biological_process unknown;C:unknown;MOBPFAVO.I.C.G.H.G.
10.499.2277.3At4g23600828460CORI3 (CORONATINE INDUCED 1)Encodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding.O.I.C.G.H.G.
10.399.2368.3At3g25760822167AOC1 (ALLENE OXIDE CYCLASE 1)encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway.O.I.C.G.H.G.
9.999.1111.4At5g48880834946PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)Encodes a peroxisomal 3-keto-acyl-CoA thiolase 2 precursor. EC2.3.1.16 thiolases. AT5G48880.1 is named PKT1 and AT5G48880.2 is named PKT2.O.I.C.G.H.G.
9.999.151.1At1g21270838723WAK2cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.O.I.C.G.H.G.
9.999.145.9At5g54610835550ANK (ankyrin)Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family.O.I.C.G.H.G.
9.899.1157.0At3g16520820900UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:in 6 functions;P:metabolic process;C:cellular_component unknown;PMVBOFO.I.C.G.H.G.
9.899.1104.6At1g67860843113unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.899.188.9At2g40750818670WRKY54member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
9.699.1130.0At3g06510819829SFR2 (SENSITIVE TO FREEZING 2)Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezingO.I.C.G.H.G.
9.699.197.0At3g04550819611unknown proteinF:unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;BPMOO.I.C.G.H.G.
9.699.174.2At2g43020818904ATPAO2 (Polyamine oxidase 2)F:electron carrier activity, amine oxidase activity, oxidoreductase activity;P:unknown;C:cellular_component unknown;BMOPFAO.I.C.G.H.G.
9.599.170.4At4g12310826840CYP706A5member of CYP706AO.I.C.G.H.G.
9.599.133.6At5g54630835552zinc finger protein-relatedF:transcription factor activity;P:regulation of transcription;C:intracellular;PFMOO.I.C.G.H.G.
9.499.1173.6At5g65480836673unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
9.499.145.8At3g26280822231CYP71B4cytochrome P450 monooxygenaseO.I.C.G.H.G.
9.399.147.8At1g034008387512-oxoglutarate-dependent dioxygenase, putativeA single copy gene that encodes a protein with sequence similarity to tomato E8 (ACC oxidase, the last step in ethylene biosynthesis) involved in ethylene synthesis and fruit ripening in tomato. This gene is not induced by ethylene in siliques. The transcript is found in siliques, etiolated seedlings, leaves, stems and flowers.O.I.C.G.H.G.
9.299.188.1At3g02870821206VTC4Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.O.I.C.G.H.G.
9.199.182.2At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
9.199.116.3At1g79460844284GA2 (GA REQUIRING 2)Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.O.I.C.G.H.G.
9.099.179.2At1g17490838322unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.099.112.1At5g43740834394disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFAO.I.C.G.H.G.
8.999.0295.9At2g14560815943LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)Encodes LURP1, a member of the LURP cluster (late upregulated in response to Hyaloperonospora parasitica) which exhibits a pronounced upregulation after recognition of the pathogenic oomycte H. parasitica. LURP1 is required for full basal defense to H. parasitica and resistance to this pathogen mediated by the R-proteins RPP4 and RPP5.O.I.C.G.H.G.
8.999.050.8At4g20170827763unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOFO.I.C.G.H.G.
8.899.0188.3At2g42600818860ATPPC2 (PHOSPHOENOLPYRUVATE CARBOXYLASE 2)Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.O.I.C.G.H.G.
8.899.0126.0At2g20920816626unknown proteinF:unknown;P:unknown;C:membrane;BPOO.I.C.G.H.G.
8.899.06.7At4g24010828501ATCSLG1encodes a protein similar to cellulose synthaseO.I.C.G.H.G.
8.799.048.7At1g52000841629jacalin lectin family proteinF:molecular_function unknown;P:response to salt stress;C:cellular_component unknown;BOMPFVAO.I.C.G.H.G.



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