CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM265868

Assay name long 10B

GSE experiment GSE10522: Expression data of Arabidopsis thaliana rosettes during chilling

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
15.9 99.5 260.5 At2g42530 818853 COR15B (COLD REGULATED 15B) F:unknown;P:response to cold;C:chloroplast, chloroplast stroma, chloroplast envelope;PBOMF O.I. C.G. H.G.
14.8 99.4 55.9 At1g56050 842056 GTP-binding protein-related F:GTP binding;P:biological_process unknown;C:chloroplast, chloroplast stroma;OBMFAP O.I. C.G. H.G.
14.7 99.4 35.4 At4g23940 828494 FtsH protease, putative F:in 7 functions;P:proteolysis;C:chloroplast;OBMFPAV O.I. C.G. H.G.
13.9 99.4 20.0 At3g21300 821684 RNA methyltransferase family protein F:methyltransferase activity, RNA binding, RNA methyltransferase activity;P:RNA processing;C:unknown;BOMFAPV O.I. C.G. H.G.
13.7 99.4 82.2 At4g16390 827333 - F:unknown;P:unknown;C:chloroplast;POFMBA O.I. C.G. H.G.
12.3 99.3 52.6 At5g48220 834875 indole-3-glycerol phosphate synthase, putative F:indole-3-glycerol-phosphate synthase activity, catalytic activity;P:metabolic process, tryptophan metabolic process;C:chloroplast, chloroplast stroma;BOAFP O.I. C.G. H.G.
12.2 99.3 411.6 At2g42540 818854 COR15A (COLD-REGULATED 15A) A cold-regulated gene whose product is targeted to the chloroplast and constitutive expression increases freezing tolerance in protoplasts in vitro and chloroplasts in vivo. NMR and x-ray diffraction studies suggest that COR15a alters the intrinsic curvature of the inner membrane of chloroplast envelope. O.I. C.G. H.G.
12.1 99.3 14.5 At1g31680 - - O.I. C.G. H.G.
11.9 99.3 112.0 At2g41680 818766 NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage. O.I. C.G. H.G.
11.4 99.3 267.1 At4g30650 829188 hydrophobic protein, putative / low temperature and salt responsive protein, putative F:unknown;P:response to salt stress, hyperosmotic salinity response, response to cold;C:endomembrane system, integral to membrane;BFPMO O.I. C.G. H.G.
11.3 99.3 41.1 At1g31690 840056 amine oxidase/ copper ion binding / quinone binding F:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA O.I. C.G. H.G.
10.3 99.2 29.9 At3g13180 820508 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein F:RNA binding;P:regulation of transcription, DNA-dependent;C:chloroplast;BOMFAP O.I. C.G. H.G.
10.1 99.2 236.3 At3g46970 823850 PHS2 (ALPHA-GLUCAN PHOSPHORYLASE 2) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen. O.I. C.G. H.G.
9.6 99.1 88.7 At1g13270 837887 MAP1C (METHIONINE AMINOPEPTIDASE 1B) Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C. O.I. C.G. H.G.
9.4 99.1 52.8 At3g18390 821368 EMB1865 (embryo defective 1865) F:RNA binding;P:embryonic development ending in seed dormancy;C:chloroplast;OPMFVBA O.I. C.G. H.G.
9.2 99.1 15.6 At5g55580 835652 mitochondrial transcription termination factor family protein / mTERF family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PMOFVB O.I. C.G. H.G.
9.0 99.1 138.8 At5g66530 836785 aldose 1-epimerase family protein F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, carbohydrate metabolic process;C:apoplast, chloroplast, chloroplast stroma;BOPFM O.I. C.G. H.G.
8.9 99.0 51.0 At3g51870 824350 binding / transporter F:transporter activity, binding;P:transport, response to nematode;C:mitochondrial inner membrane, chloroplast, chloroplast envelope;MFPOV O.I. C.G. H.G.
8.8 99.0 13.9 At3g58070 824976 GIS (GLABROUS INFLORESCENCE STEMS) Putative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenile�adult leaf transition and inducing the formation of rosette leaves on inflorescence stems. O.I. C.G. H.G.

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