CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM265411

Assay name Arabidopsis, whole roots, -Fe, replicate 1

GSE experiment GSE10496: Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
151.6 99.9 244.1 At5g42600 834267 MRN1 (MARNERAL SYNTHASE) Encodes an oxidosqualene synthase that produces the monocyclic triterpene marneral. O.I. C.G. H.G.
138.3 99.9 165.1 At5g42590 834266 CYP71A16 putative cytochrome P450 O.I. C.G. H.G.
114.1 99.9 127.4 At2g45750 819183 dehydration-responsive family protein F:unknown;P:biological_process unknown;C:unknown;PBO O.I. C.G. H.G.
111.1 99.9 103.3 At4g15290 827195 ATCSLB05 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
109.5 99.9 39.6 At4g12330 826842 CYP706A7 member of CYP706A O.I. C.G. H.G.
99.2 99.9 49.4 At4g15230 827187 PDR2 (PLEIOTROPIC DRUG RESISTANCE 2) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPV O.I. C.G. H.G.
72.6 99.9 47.2 At5g24140 832479 SQP2 Encodes a protein with similarity to squalene monoxygenases. O.I. C.G. H.G.
70.9 99.9 106.3 At3g45710 823713 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA O.I. C.G. H.G.
66.9 99.8 84.7 At5g47980 834849 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity;P:unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
65.6 99.8 62.9 At2g16980 816201 tetracycline transporter F:tetracycline transporter activity;P:response to antibiotic, tetracycline transport;C:endomembrane system, integral to membrane;BOMPAF O.I. C.G. H.G.
64.2 99.8 11.5 At2g19410 816460 protein kinase family protein F:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;MPOBFVA O.I. C.G. H.G.
63.4 99.8 27.3 At1g08990 837420 PGSIP5 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5) F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:endomembrane system;PMFVBO O.I. C.G. H.G.
61.7 99.8 30.8 At4g29800 829102 PLP8 (PATATIN-LIKE PROTEIN 8) F:unknown;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOFM O.I. C.G. H.G.
59.7 99.8 51.1 At5g61250 836246 AtGUS1 (Arabidopsis thaliana glucuronidase 1) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted. O.I. C.G. H.G.
53.8 99.8 171.1 At5g48010 834852 THAS1 (THALIANOL SYNTHASE 1) Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism. O.I. C.G. H.G.
52.8 99.8 60.2 At1g10130 837550 ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis. O.I. C.G. H.G.
48.7 99.8 209.7 At5g48230 834876 ACAT2 (ACETOACETYL-COA THIOLASE 2) F:acetyl-CoA C-acetyltransferase activity, catalytic activity;P:embryonic development ending in seed dormancy;C:peroxisome, plasma membrane;BOMFAP O.I. C.G. H.G.
48.6 99.8 105.2 At5g09890 830849 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:cytosol;MOPFBVA O.I. C.G. H.G.
47.8 99.8 281.1 At3g29250 822580 copper ion binding / oxidoreductase F:oxidoreductase activity, copper ion binding;P:metabolic process;C:cellular_component unknown;BOFMPAV O.I. C.G. H.G.
47.8 99.8 79.4 At4g36610 829813 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFA O.I. C.G. H.G.
47.1 99.8 86.9 At1g22550 838861 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF O.I. C.G. H.G.
45.8 99.8 62.9 At3g45700 823712 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF O.I. C.G. H.G.
43.8 99.8 32.9 At1g51860 841613 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
42.3 99.8 185.6 At1g65840 842894 ATPAO4 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 4) encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes. O.I. C.G. H.G.
41.5 99.8 48.5 At2g41970 818797 protein kinase, putative F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
41.1 99.8 30.9 At3g02850 821052 SKOR member of Stelar K+ outward rectifying channel (SKOR) family. Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+. O.I. C.G. H.G.
38.3 99.8 76.9 At3g24670 822063 pectate lyase family protein F:pectate lyase activity;P:biological_process unknown;C:endomembrane system;PBFO O.I. C.G. H.G.
38.1 99.8 78.7 At2g29750 817525 UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1) F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF O.I. C.G. H.G.
37.8 99.8 182.9 At1g30870 839971 cationic peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOM O.I. C.G. H.G.
37.3 99.7 29.2 At3g45680 823710 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;PBMOF O.I. C.G. H.G.
36.8 99.7 29.0 At3g45410 823679 lectin protein kinase family protein encodes a receptor-like kinase that has serine/threonine kinase activity whose expression is induced by high salt stress. This induction is inhibited by tobacco ethylene receptor. O.I. C.G. H.G.
36.7 99.7 31.0 At2g44110 819017 MLO15 (MILDEW RESISTANCE LOCUS O 15) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO15 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root tips and flower (papillae, anthers and pollen grains), as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
36.6 99.7 108.7 At4g03190 828045 GRH1 (GRR1-LIKE PROTEIN 1) Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression. O.I. C.G. H.G.
36.1 99.7 94.7 At1g58440 842213 XF1 Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. O.I. C.G. H.G.
35.5 99.7 10.6 At3g09240 820080 protein kinase-related F:protein tyrosine kinase activity, binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMBOFVA O.I. C.G. H.G.
35.4 99.7 128.5 At4g20110 827757 vacuolar sorting receptor, putative F:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFA O.I. C.G. H.G.
34.9 99.7 74.1 At1g62980 842601 ATEXPA18 (ARABIDOPSIS THALIANA EXPANSIN A18) Alpha-expansin 18. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
34.4 99.7 116.2 At3g01720 821091 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
34.3 99.7 72.0 At2g25160 817054 CYP82F1 member of CYP82F O.I. C.G. H.G.
34.0 99.7 228.6 At2g28670 817416 disease resistance-responsive family protein / fibroin-related F:molecular_function unknown;P:unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
34.0 99.7 40.5 At1g33700 840261 catalytic/ glucosylceramidase F:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:vacuole;BPMOA O.I. C.G. H.G.
33.6 99.7 67.5 At5g38030 833782 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM O.I. C.G. H.G.
33.5 99.7 146.2 At1g45130 841080 BGAL5 (beta-galactosidase 5) F:cation binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;BPMFOA O.I. C.G. H.G.
33.4 99.7 50.5 At3g11320 820304 organic anion transmembrane transporter F:organic anion transmembrane transporter activity;P:unknown;C:endomembrane system;PMFOBA O.I. C.G. H.G.
33.4 99.7 42.6 At1g68710 843201 haloacid dehalogenase-like hydrolase family protein F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:mitochondrion, integral to membrane, membrane;MBOFPAV O.I. C.G. H.G.
33.4 99.7 20.3 At3g56000 824766 ATCSLA14 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
32.8 99.7 145.2 At5g48000 834851 CYP708A2 Encodes a member of the CYP708A family of cytochrome P450 enzymes. THAH appears to add a hydroxyl group to the triterpene thalianol. thah1 mutants have an elevated accumulation of thalianol. thah1-1 mutants have longer roots than wild type plants. Thalian-diol and desaturated thalian-diol are lost from the root extracts of thah1-1 mutants. Overexpression of the sequence from At5g48000.1 rescues the thah1-1 mutant phenotype (Field 2008); it is unknown whether the shorter sequences associated with other gene models would provide functional complementation. O.I. C.G. H.G.
32.8 99.7 104.5 At3g44320 823557 NIT3 (NITRILASE 3) This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways. O.I. C.G. H.G.
32.7 99.7 238.1 At5g60660 836187 PIP2 F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV O.I. C.G. H.G.
32.7 99.7 15.5 At3g07070 819893 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
32.5 99.7 55.4 At1g05320 837031 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
32.2 99.7 40.2 At3g10710 820240 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
31.8 99.7 110.5 At1g23020 838910 FRO3 Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon. O.I. C.G. H.G.
31.8 99.7 27.1 At3g27470 822368 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO O.I. C.G. H.G.
31.7 99.7 29.1 At4g15340 827200 ATPEN1 (ARABIDOPSIS THALIANA PENTACYCLIC TRITERPENE SYNTHASE 1) Encodes a protein that catalyzes the production of the tricyclic triterpene arabidiol when expressed in yeast. O.I. C.G. H.G.
31.0 99.7 35.9 At5g42580 834265 CYP705A12 a member of the cytochrome P450 family O.I. C.G. H.G.
30.6 99.7 55.0 At2g26650 817206 AKT1 (ARABIDOPSIS K TRANSPORTER 1) Shaker-like inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. O.I. C.G. H.G.
30.4 99.7 93.5 At5g38020 833781 S-adenosyl-L-methionine:carboxyl methyltransferase family protein encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus) O.I. C.G. H.G.
30.1 99.7 29.4 At3g60330 825204 AHA7 (Arabidopsis H(+)-ATPase 7) F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane;BMOFPAV O.I. C.G. H.G.
29.9 99.7 15.5 At3g10660 820235 CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2) predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. O.I. C.G. H.G.
29.7 99.7 135.0 At1g64590 842767 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
29.7 99.7 41.4 At4g19680 827712 IRT2 encodes an iron transporter whose expression is induced by iron and zinc deficiency. Gene is specifically expressed in the external cell layers of the root subapical zone. O.I. C.G. H.G.
29.5 99.7 173.2 At5g47990 834850 CYP705A5 encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings. O.I. C.G. H.G.
29.5 99.7 137.7 At1g05570 837059 CALS1 (CALLOSE SYNTHASE 1) Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48. O.I. C.G. H.G.
29.5 99.7 18.4 At4g11530 826757 kinase F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
29.4 99.7 68.5 At1g72200 843552 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
29.3 99.7 110.2 At1g74460 843787 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
29.3 99.7 34.6 At5g23190 832383 CYP86B1 cytochrome P450 CYP86B1, nuclear gene for chloroplast product O.I. C.G. H.G.
29.2 99.7 102.8 At2g02960 814825 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV O.I. C.G. H.G.
29.0 99.7 34.9 At3g22460 821817 OASA2 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) Encodes a member of a family of genes with O-acetylserine(thiol)lyase activity. O.I. C.G. H.G.
28.8 99.7 86.0 At3g06390 819813 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.5 99.7 54.2 At2g01830 814714 WOL (WOODEN LEG) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane O.I. C.G. H.G.
28.4 99.7 59.5 At1g15110 838074 phosphatidyl serine synthase family protein F:CDP-diacylglycerol-serine O-phosphatidyltransferase activity;P:phosphatidylserine biosynthetic process;C:cellular_component unknown;MOPF O.I. C.G. H.G.
28.3 99.7 105.4 At1g56320 842085 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
27.6 99.7 75.2 At5g57090 835813 EIR1 (ETHYLENE INSENSITIVE ROOT 1) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity. O.I. C.G. H.G.
27.3 99.7 35.9 At3g25110 822102 AtFaTA (Arabidopsis FatA acyl-ACP thioesterase) Encodes a FatA acyl-ACP thioesterase O.I. C.G. H.G.
27.2 99.7 50.7 At1g22540 838860 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF O.I. C.G. H.G.
27.1 99.7 219.5 At2g36380 818211 PDR6 F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
27.1 99.7 36.3 At3g23160 821892 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;POB O.I. C.G. H.G.
27.1 99.7 18.0 At4g29180 829039 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
27.1 99.7 16.8 At2g04680 815011 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF O.I. C.G. H.G.
27.0 99.7 37.0 At1g66800 842998 cinnamyl-alcohol dehydrogenase family / CAD family similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase O.I. C.G. H.G.
26.5 99.7 36.4 At4g14570 827104 acylaminoacyl-peptidase-related F:serine-type peptidase activity;P:proteolysis;C:chloroplast, vacuole;BOMFPA O.I. C.G. H.G.
26.1 99.7 12.4 At5g65160 836639 tetratricopeptide repeat (TPR)-containing protein F:binding;P:biological_process unknown;C:cellular_component unknown;MOBFPA O.I. C.G. H.G.
25.8 99.7 21.1 At3g20130 821556 CYP705A22 member of CYP705A O.I. C.G. H.G.
25.7 99.7 201.3 At2g17420 816248 NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A) NADPH-dependent thioredoxin reductase, major cytosolic isoform O.I. C.G. H.G.
25.6 99.7 86.1 At1g30130 839892 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBPF O.I. C.G. H.G.
25.2 99.6 144.8 At1g74030 843741 enolase, putative F:phosphopyruvate hydratase activity;P:in 12 processes;C:phosphopyruvate hydratase complex, chloroplast;OBMFAP O.I. C.G. H.G.
25.2 99.6 72.6 At5g19520 832072 MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9) F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV O.I. C.G. H.G.
23.8 99.6 118.7 At5g26740 832714 unknown protein F:unknown;P:unknown;C:endomembrane system;MPFO O.I. C.G. H.G.
23.8 99.6 105.0 At3g57010 824868 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;PMBOA O.I. C.G. H.G.
23.8 99.6 16.2 At1g35220 840411 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOP O.I. C.G. H.G.
23.6 99.6 37.5 At1g31950 840085 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:membrane;PO O.I. C.G. H.G.
23.4 99.6 19.3 At3g63470 825522 scpl40 (serine carboxypeptidase-like 40) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB O.I. C.G. H.G.
22.9 99.6 79.7 At4g38640 830020 choline transporter-related F:unknown;P:unknown;C:unknown;MOFPAB O.I. C.G. H.G.
22.8 99.6 22.3 At1g31120 839997 KUP10 potassium transporter O.I. C.G. H.G.
22.7 99.6 133.2 At1g15210 838087 PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane, chloroplast, membrane;BOMFAPV O.I. C.G. H.G.
22.7 99.6 47.4 At5g36940 833664 CAT3 (CATIONIC AMINO ACID TRANSPORTER 3) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. O.I. C.G. H.G.
22.7 99.6 43.8 At4g05200 825868 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
22.7 99.6 43.7 At3g23660 821946 transport protein, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
151.6	99.9	244.1	At5g42600	834267	MRN1 (MARNERAL SYNTHASE)	Encodes an oxidosqualene synthase that produces the monocyclic triterpene marneral.	O.I.	C.G.	H.G.
138.3	99.9	165.1	At5g42590	834266	CYP71A16	putative cytochrome P450	O.I.	C.G.	H.G.
114.1	99.9	127.4	At2g45750	819183	dehydration-responsive family protein	F:unknown;P:biological_process unknown;C:unknown;PBO	O.I.	C.G.	H.G.
111.1	99.9	103.3	At4g15290	827195	ATCSLB05	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
109.5	99.9	39.6	At4g12330	826842	CYP706A7	member of CYP706A	O.I.	C.G.	H.G.
99.2	99.9	49.4	At4g15230	827187	PDR2 (PLEIOTROPIC DRUG RESISTANCE 2)	F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
72.6	99.9	47.2	At5g24140	832479	SQP2	Encodes a protein with similarity to squalene monoxygenases.	O.I.	C.G.	H.G.
70.9	99.9	106.3	At3g45710	823713	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA	O.I.	C.G.	H.G.
66.9	99.8	84.7	At5g47980	834849	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity;P:unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
65.6	99.8	62.9	At2g16980	816201	tetracycline transporter	F:tetracycline transporter activity;P:response to antibiotic, tetracycline transport;C:endomembrane system, integral to membrane;BOMPAF	O.I.	C.G.	H.G.
64.2	99.8	11.5	At2g19410	816460	protein kinase family protein	F:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;MPOBFVA	O.I.	C.G.	H.G.
63.4	99.8	27.3	At1g08990	837420	PGSIP5 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5)	F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:endomembrane system;PMFVBO	O.I.	C.G.	H.G.
61.7	99.8	30.8	At4g29800	829102	PLP8 (PATATIN-LIKE PROTEIN 8)	F:unknown;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOFM	O.I.	C.G.	H.G.
59.7	99.8	51.1	At5g61250	836246	AtGUS1 (Arabidopsis thaliana glucuronidase 1)	Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.	O.I.	C.G.	H.G.
53.8	99.8	171.1	At5g48010	834852	THAS1 (THALIANOL SYNTHASE 1)	Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.	O.I.	C.G.	H.G.
52.8	99.8	60.2	At1g10130	837550	ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3)	Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.	O.I.	C.G.	H.G.
48.7	99.8	209.7	At5g48230	834876	ACAT2 (ACETOACETYL-COA THIOLASE 2)	F:acetyl-CoA C-acetyltransferase activity, catalytic activity;P:embryonic development ending in seed dormancy;C:peroxisome, plasma membrane;BOMFAP	O.I.	C.G.	H.G.
48.6	99.8	105.2	At5g09890	830849	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:cytosol;MOPFBVA	O.I.	C.G.	H.G.
47.8	99.8	281.1	At3g29250	822580	copper ion binding / oxidoreductase	F:oxidoreductase activity, copper ion binding;P:metabolic process;C:cellular_component unknown;BOFMPAV	O.I.	C.G.	H.G.
47.8	99.8	79.4	At4g36610	829813	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFA	O.I.	C.G.	H.G.
47.1	99.8	86.9	At1g22550	838861	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF	O.I.	C.G.	H.G.
45.8	99.8	62.9	At3g45700	823712	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF	O.I.	C.G.	H.G.
43.8	99.8	32.9	At1g51860	841613	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
42.3	99.8	185.6	At1g65840	842894	ATPAO4 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 4)	encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.	O.I.	C.G.	H.G.
41.5	99.8	48.5	At2g41970	818797	protein kinase, putative	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
41.1	99.8	30.9	At3g02850	821052	SKOR	member of Stelar K+ outward rectifying channel (SKOR) family. Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.	O.I.	C.G.	H.G.
38.3	99.8	76.9	At3g24670	822063	pectate lyase family protein	F:pectate lyase activity;P:biological_process unknown;C:endomembrane system;PBFO	O.I.	C.G.	H.G.
38.1	99.8	78.7	At2g29750	817525	UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1)	F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF	O.I.	C.G.	H.G.
37.8	99.8	182.9	At1g30870	839971	cationic peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOM	O.I.	C.G.	H.G.
37.3	99.7	29.2	At3g45680	823710	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;PBMOF	O.I.	C.G.	H.G.
36.8	99.7	29.0	At3g45410	823679	lectin protein kinase family protein	encodes a receptor-like kinase that has serine/threonine kinase activity whose expression is induced by high salt stress. This induction is inhibited by tobacco ethylene receptor.	O.I.	C.G.	H.G.
36.7	99.7	31.0	At2g44110	819017	MLO15 (MILDEW RESISTANCE LOCUS O 15)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO15 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root tips and flower (papillae, anthers and pollen grains), as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
36.6	99.7	108.7	At4g03190	828045	GRH1 (GRR1-LIKE PROTEIN 1)	Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression.	O.I.	C.G.	H.G.
36.1	99.7	94.7	At1g58440	842213	XF1	Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.	O.I.	C.G.	H.G.
35.5	99.7	10.6	At3g09240	820080	protein kinase-related	F:protein tyrosine kinase activity, binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMBOFVA	O.I.	C.G.	H.G.
35.4	99.7	128.5	At4g20110	827757	vacuolar sorting receptor, putative	F:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFA	O.I.	C.G.	H.G.
34.9	99.7	74.1	At1g62980	842601	ATEXPA18 (ARABIDOPSIS THALIANA EXPANSIN A18)	Alpha-expansin 18. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
34.4	99.7	116.2	At3g01720	821091	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
34.3	99.7	72.0	At2g25160	817054	CYP82F1	member of CYP82F	O.I.	C.G.	H.G.
34.0	99.7	228.6	At2g28670	817416	disease resistance-responsive family protein / fibroin-related	F:molecular_function unknown;P:unknown;C:endomembrane system;BMOPFVA	O.I.	C.G.	H.G.
34.0	99.7	40.5	At1g33700	840261	catalytic/ glucosylceramidase	F:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:vacuole;BPMOA	O.I.	C.G.	H.G.
33.6	99.7	67.5	At5g38030	833782	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM	O.I.	C.G.	H.G.
33.5	99.7	146.2	At1g45130	841080	BGAL5 (beta-galactosidase 5)	F:cation binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;BPMFOA	O.I.	C.G.	H.G.
33.4	99.7	50.5	At3g11320	820304	organic anion transmembrane transporter	F:organic anion transmembrane transporter activity;P:unknown;C:endomembrane system;PMFOBA	O.I.	C.G.	H.G.
33.4	99.7	42.6	At1g68710	843201	haloacid dehalogenase-like hydrolase family protein	F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:mitochondrion, integral to membrane, membrane;MBOFPAV	O.I.	C.G.	H.G.
33.4	99.7	20.3	At3g56000	824766	ATCSLA14	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
32.8	99.7	145.2	At5g48000	834851	CYP708A2	Encodes a member of the CYP708A family of cytochrome P450 enzymes. THAH appears to add a hydroxyl group to the triterpene thalianol. thah1 mutants have an elevated accumulation of thalianol. thah1-1 mutants have longer roots than wild type plants. Thalian-diol and desaturated thalian-diol are lost from the root extracts of thah1-1 mutants. Overexpression of the sequence from At5g48000.1 rescues the thah1-1 mutant phenotype (Field 2008); it is unknown whether the shorter sequences associated with other gene models would provide functional complementation.	O.I.	C.G.	H.G.
32.8	99.7	104.5	At3g44320	823557	NIT3 (NITRILASE 3)	This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.	O.I.	C.G.	H.G.
32.7	99.7	238.1	At5g60660	836187	PIP2	F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV	O.I.	C.G.	H.G.
32.7	99.7	15.5	At3g07070	819893	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
32.5	99.7	55.4	At1g05320	837031	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
32.2	99.7	40.2	At3g10710	820240	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
31.8	99.7	110.5	At1g23020	838910	FRO3	Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon.	O.I.	C.G.	H.G.
31.8	99.7	27.1	At3g27470	822368	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO	O.I.	C.G.	H.G.
31.7	99.7	29.1	At4g15340	827200	ATPEN1 (ARABIDOPSIS THALIANA PENTACYCLIC TRITERPENE SYNTHASE 1)	Encodes a protein that catalyzes the production of the tricyclic triterpene arabidiol when expressed in yeast.	O.I.	C.G.	H.G.
31.0	99.7	35.9	At5g42580	834265	CYP705A12	a member of the cytochrome P450 family	O.I.	C.G.	H.G.
30.6	99.7	55.0	At2g26650	817206	AKT1 (ARABIDOPSIS K TRANSPORTER 1)	Shaker-like inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis.	O.I.	C.G.	H.G.
30.4	99.7	93.5	At5g38020	833781	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)	O.I.	C.G.	H.G.
30.1	99.7	29.4	At3g60330	825204	AHA7 (Arabidopsis H(+)-ATPase 7)	F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane;BMOFPAV	O.I.	C.G.	H.G.
29.9	99.7	15.5	At3g10660	820235	CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2)	predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.	O.I.	C.G.	H.G.
29.7	99.7	135.0	At1g64590	842767	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
29.7	99.7	41.4	At4g19680	827712	IRT2	encodes an iron transporter whose expression is induced by iron and zinc deficiency. Gene is specifically expressed in the external cell layers of the root subapical zone.	O.I.	C.G.	H.G.
29.5	99.7	173.2	At5g47990	834850	CYP705A5	encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings.	O.I.	C.G.	H.G.
29.5	99.7	137.7	At1g05570	837059	CALS1 (CALLOSE SYNTHASE 1)	Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.	O.I.	C.G.	H.G.
29.5	99.7	18.4	At4g11530	826757	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
29.4	99.7	68.5	At1g72200	843552	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
29.3	99.7	110.2	At1g74460	843787	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
29.3	99.7	34.6	At5g23190	832383	CYP86B1	cytochrome P450 CYP86B1, nuclear gene for chloroplast product	O.I.	C.G.	H.G.
29.2	99.7	102.8	At2g02960	814825	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV	O.I.	C.G.	H.G.
29.0	99.7	34.9	At3g22460	821817	OASA2 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)	Encodes a member of a family of genes with O-acetylserine(thiol)lyase activity.	O.I.	C.G.	H.G.
28.8	99.7	86.0	At3g06390	819813	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.5	99.7	54.2	At2g01830	814714	WOL (WOODEN LEG)	Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane	O.I.	C.G.	H.G.
28.4	99.7	59.5	At1g15110	838074	phosphatidyl serine synthase family protein	F:CDP-diacylglycerol-serine O-phosphatidyltransferase activity;P:phosphatidylserine biosynthetic process;C:cellular_component unknown;MOPF	O.I.	C.G.	H.G.
28.3	99.7	105.4	At1g56320	842085	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
27.6	99.7	75.2	At5g57090	835813	EIR1 (ETHYLENE INSENSITIVE ROOT 1)	Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.	O.I.	C.G.	H.G.
27.3	99.7	35.9	At3g25110	822102	AtFaTA (Arabidopsis FatA acyl-ACP thioesterase)	Encodes a FatA acyl-ACP thioesterase	O.I.	C.G.	H.G.
27.2	99.7	50.7	At1g22540	838860	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF	O.I.	C.G.	H.G.
27.1	99.7	219.5	At2g36380	818211	PDR6	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
27.1	99.7	36.3	At3g23160	821892	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;POB	O.I.	C.G.	H.G.
27.1	99.7	18.0	At4g29180	829039	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
27.1	99.7	16.8	At2g04680	815011	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF	O.I.	C.G.	H.G.
27.0	99.7	37.0	At1g66800	842998	cinnamyl-alcohol dehydrogenase family / CAD family	similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase	O.I.	C.G.	H.G.
26.5	99.7	36.4	At4g14570	827104	acylaminoacyl-peptidase-related	F:serine-type peptidase activity;P:proteolysis;C:chloroplast, vacuole;BOMFPA	O.I.	C.G.	H.G.
26.1	99.7	12.4	At5g65160	836639	tetratricopeptide repeat (TPR)-containing protein	F:binding;P:biological_process unknown;C:cellular_component unknown;MOBFPA	O.I.	C.G.	H.G.
25.8	99.7	21.1	At3g20130	821556	CYP705A22	member of CYP705A	O.I.	C.G.	H.G.
25.7	99.7	201.3	At2g17420	816248	NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)	NADPH-dependent thioredoxin reductase, major cytosolic isoform	O.I.	C.G.	H.G.
25.6	99.7	86.1	At1g30130	839892	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBPF	O.I.	C.G.	H.G.
25.2	99.6	144.8	At1g74030	843741	enolase, putative	F:phosphopyruvate hydratase activity;P:in 12 processes;C:phosphopyruvate hydratase complex, chloroplast;OBMFAP	O.I.	C.G.	H.G.
25.2	99.6	72.6	At5g19520	832072	MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9)	F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV	O.I.	C.G.	H.G.
23.8	99.6	118.7	At5g26740	832714	unknown protein	F:unknown;P:unknown;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
23.8	99.6	105.0	At3g57010	824868	strictosidine synthase family protein	F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;PMBOA	O.I.	C.G.	H.G.
23.8	99.6	16.2	At1g35220	840411	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOP	O.I.	C.G.	H.G.
23.6	99.6	37.5	At1g31950	840085	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:membrane;PO	O.I.	C.G.	H.G.
23.4	99.6	19.3	At3g63470	825522	scpl40 (serine carboxypeptidase-like 40)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB	O.I.	C.G.	H.G.
22.9	99.6	79.7	At4g38640	830020	choline transporter-related	F:unknown;P:unknown;C:unknown;MOFPAB	O.I.	C.G.	H.G.
22.8	99.6	22.3	At1g31120	839997	KUP10	potassium transporter	O.I.	C.G.	H.G.
22.7	99.6	133.2	At1g15210	838087	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7)	F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane, chloroplast, membrane;BOMFAPV	O.I.	C.G.	H.G.
22.7	99.6	47.4	At5g36940	833664	CAT3 (CATIONIC AMINO ACID TRANSPORTER 3)	Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.	O.I.	C.G.	H.G.
22.7	99.6	43.8	At4g05200	825868	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
22.7	99.6	43.7	At3g23660	821946	transport protein, putative	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP	O.I.	C.G.	H.G.

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GSM ID	GSM265411
Assay name	Arabidopsis, whole roots, -Fe, replicate 1
GSE experiment	GSE10496: Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)

Microarray experiments to specifically-expressed genes

GSM ID GSM265411 Assay name Arabidopsis, whole roots, -Fe, replicate 1 GSE experiment GSE10496: Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)

GSM ID GSM265411

Assay name Arabidopsis, whole roots, -Fe, replicate 1

GSE experiment GSE10496: Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)