Microarray experiments to specifically-expressed genes

GSM ID GSM262012
Assay name Nipponbare, 2 days after infection with S. hermonthica, biological replicate #1
GSE experiment GSE10373: Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
127.8100.05.4Os07g0127500AK062949.1-PR-1a pathogenesis related protein (Hv-1a)precursor4e-1At1g31175unknown proteinO.I.C.G.H.G.
123.5100.024.0Os07g0127600AK063248.1-Allergen V5/Tpx-1 related family protein1e-4At3g09590pathogenesis-related protein, putativeO.I.C.G.H.G.
81.499.969.0Os07g0125000AK060005.1-Pathogenesis-related protein PR-1 precursor1e-4At3g09590pathogenesis-related protein, putativeO.I.C.G.H.G.
56.499.99.1Os04g0617900AK109057.1-Germin-like protein precursor8e-3At5g26700germin-like protein, putativeO.I.C.G.H.G.
32.999.82.5Os04g0651000AK108994.1-Peroxidase3e-3At5g58400peroxidase, putativeO.I.C.G.H.G.
28.099.635.6Os04g0208200CB624786-Cysteine proteinase8e-2At1g29090peptidase C1A papain family proteinO.I.C.G.H.G.
26.899.65.2Os03g0235000D14482.1-Peroxidase (EC 1.11.1.7)7e-4At5g66390peroxidase 72 (PER72) (P72) (PRXR8)O.I.C.G.H.G.
25.899.535.6Os12g0555200AK070762.1-Probenazole-inducible protein PBZ12e+0At2g34530unknown proteinO.I.C.G.H.G.
24.499.431.7Os04g0308500AK108905.1-Conserved hypothetical protein7e+0At3g12830auxin-responsive family proteinO.I.C.G.H.G.
23.999.412.8Os11g0453900AK109096.1-Dehydrin RAB 16D3e-2At2g21490LEA (DEHYDRIN LEA)O.I.C.G.H.G.
23.499.428.4Os05g0226900AF337054.1-Conserved hypothetical protein3e-3At2g43970La domain-containing proteinO.I.C.G.H.G.
23.399.42.6Os04g0178300AK100631.1-Copalyl diphosphate synthetase (Fragment)3e-1At4g01200C2 domain-containing proteinO.I.C.G.H.G.
23.099.30.9Os01g0920500AK107508.1-Hypothetical protein1e+0At4g21040Dof-type zinc finger domain-containing proteinO.I.C.G.H.G.
22.699.336.0Os03g0306700AK109929.1-Basic-leucine zipper (bZIP) transcription factordomain containing protein2e-1At2g27250CLV3 (CLAVATA3)O.I.C.G.H.G.
22.199.32.0Os01g03524009629.m02425--4e+0At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)O.I.C.G.H.G.
21.999.31.0Os08g0477100AK108679.1-Patatin family protein6e-5At2g26560PLA2A (PHOSPHOLIPASE A 2A)O.I.C.G.H.G.
21.999.30.7Os07g0218700AK108382.1-Cytochrome P450 family protein4e-3At3g32047electron carrier/ heme binding / iron ion binding / monooxygenaseO.I.C.G.H.G.
21.899.22.2Os01g0307500AK108663.1-Cation transporter family protein1e+0At3g02670proline-rich family proteinO.I.C.G.H.G.
21.199.20.1Os04g0103900AK100989.1-Chalcone synthase (EC 2.3.1.74)2e-1At5g13930TT4 (TRANSPARENT TESTA 4)O.I.C.G.H.G.
20.399.10.6Os10g04398009638.m02609-Cytochrome P450 family protein1e-2At3g26180CYP71B20O.I.C.G.H.G.
19.799.11.8Os11g0708100AK060544.1-Laccase (EC 1.10.3.2) (Fragment)1e-8At5g01190LAC10 (laccase 10)O.I.C.G.H.G.
19.799.11.4Os06g0313500BI811701-Hypothetical protein3e+0At4g01150unknown proteinO.I.C.G.H.G.
19.599.131.2Os10g0109600D14481.1-Peroxidase (EC 1.11.1.7)3e-3At3g50990electron carrier/ heme binding / peroxidaseO.I.C.G.H.G.
19.599.10.4Os04g0308400CB965389-Conserved hypothetical protein1e+1At3g48020-O.I.C.G.H.G.
19.299.03.4Os07g0643800AK103858.1-Plant disease resistance response protein familyprotein1e-1At1g01730unknown proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage