CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM262008

Assay name IAC165, 11 days after infection with S. hermonthica, biological replicate #1

GSE experiment GSE10373: Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
104.4 100.0 31.5 Os04g0188600 CB964566 - - 3e+0 At3g55290 short-chain dehydrogenase/reductase (SDR) family protein O.I. C.G. H.G.
68.7 99.9 9.9 Os01g0612500 AK111393.1 - Phospholipase/Carboxylesterase family protein 3e+0 At5g06290 2-Cys Prx B (2-Cysteine peroxiredoxin B) O.I. C.G. H.G.
56.6 99.9 51.5 Os08g0120600 AK104952.1 - Aldolase C-1 8e-10 At3g52930 fructose-bisphosphate aldolase, putative O.I. C.G. H.G.
39.5 99.9 11.0 Os08g0267900 AK107040.1 - Conserved hypothetical protein 3e-2 At1g76820 GTP binding / GTPase O.I. C.G. H.G.
34.1 99.8 26.0 Os04g0189012 9632.m00980 - - 2e+0 At5g13910 LEP (LEAFY PETIOLE) O.I. C.G. H.G.
33.1 99.8 4.9 Os12g0632900 AK071957.1 - Receptor protein kinase 3e-5 At5g49660 leucine-rich repeat transmembrane protein kinase, putative O.I. C.G. H.G.
32.8 99.8 68.9 Os11g0306400 AK106179.1 - O-methyltransferase, family 2 domain containingprotein 2e-1 At3g16190 isochorismatase hydrolase family protein O.I. C.G. H.G.
32.5 99.8 93.8 Os11g0307300 9639.m01888 - Herbicide safener binding protein 6e-1 At3g16190 isochorismatase hydrolase family protein O.I. C.G. H.G.
30.9 99.7 20.5 Os06g0302000 AK106070.1 - Hypothetical protein 3e+0 At1g06475 unknown protein O.I. C.G. H.G.
29.2 99.7 0.0 Os12g0202700 9640.m00951 - O-methyltransferase, family 2 protein 4e-1 At1g18800 NRP2 (NAP1-RELATED PROTEIN 2) O.I. C.G. H.G.
29.0 99.7 243.2 Os04g0521100 9632.m04226 - Plasma membrane intrinsic protein (Aquaporin) 1e-42 At2g37170 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) O.I. C.G. H.G.
25.0 99.5 325.2 Os05g0114700 AK111634.1 - Myb, DNA-binding domain containing protein 7e-5 At4g38620 MYB4 O.I. C.G. H.G.
24.4 99.4 2.7 Os04g0178300 AK100631.1 - Copalyl diphosphate synthetase (Fragment) 3e-1 At4g01200 C2 domain-containing protein O.I. C.G. H.G.
24.1 99.4 2.7 Os10g0516900 AK107070.1 - Conserved hypothetical protein 6e+0 At4g33130 - O.I. C.G. H.G.
23.7 99.4 27.2 Os11g0700500 AK111626.1 - Myb, DNA-binding domain containing protein 1e-8 At5g59780 MYB59 (MYB DOMAIN PROTEIN 59) O.I. C.G. H.G.
22.3 99.3 14.2 Os05g0493800 AK110589.1 - MtN21 nodulin protein-like 6e-11 At5g07050 - O.I. C.G. H.G.
21.8 99.2 9.3 Os12g0567300 AK107214.1 - Snapdragon myb protein 305 homolog 5e-14 At3g46130 MYB111 (MYB DOMAIN PROTEIN 111) O.I. C.G. H.G.
21.3 99.2 29.4 Os12g0555200 AK070762.1 - Probenazole-inducible protein PBZ1 2e+0 At2g34530 unknown protein O.I. C.G. H.G.
21.1 99.2 7.1 Os06g0717200 AK111824.1 - Leucine-rich repeat/receptor protein kinaseprecursor 7e-12 At3g49670 BAM2 (BARELY ANY MERISTEM 2) O.I. C.G. H.G.
20.7 99.2 2.4 Os12g0490000 CA762266 - Mitochodrial transcription terminationfactor-related family protein 5e+0 At4g08170 inositol 1,3,4-trisphosphate 5/6-kinase family protein O.I. C.G. H.G.
20.0 99.1 0.9 Os03g0360200 AK110606.1 - Hypothetical protein 2e+0 At4g05070 unknown protein O.I. C.G. H.G.
19.9 99.1 2.6 Os05g0515500 AK068905.1 - O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) 7e-1 At1g53625 unknown protein O.I. C.G. H.G.
19.0 99.0 454.8 Os09g0409100 9637.m02088 - Conserved hypothetical protein 2e+0 At5g51590 DNA-binding protein-related O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
104.4	100.0	31.5	Os04g0188600	CB964566	-	-	3e+0	At3g55290	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	C.G.	H.G.
68.7	99.9	9.9	Os01g0612500	AK111393.1	-	Phospholipase/Carboxylesterase family protein	3e+0	At5g06290	2-Cys Prx B (2-Cysteine peroxiredoxin B)	O.I.	C.G.	H.G.
56.6	99.9	51.5	Os08g0120600	AK104952.1	-	Aldolase C-1	8e-10	At3g52930	fructose-bisphosphate aldolase, putative	O.I.	C.G.	H.G.
39.5	99.9	11.0	Os08g0267900	AK107040.1	-	Conserved hypothetical protein	3e-2	At1g76820	GTP binding / GTPase	O.I.	C.G.	H.G.
34.1	99.8	26.0	Os04g0189012	9632.m00980	-	-	2e+0	At5g13910	LEP (LEAFY PETIOLE)	O.I.	C.G.	H.G.
33.1	99.8	4.9	Os12g0632900	AK071957.1	-	Receptor protein kinase	3e-5	At5g49660	leucine-rich repeat transmembrane protein kinase, putative	O.I.	C.G.	H.G.
32.8	99.8	68.9	Os11g0306400	AK106179.1	-	O-methyltransferase, family 2 domain containingprotein	2e-1	At3g16190	isochorismatase hydrolase family protein	O.I.	C.G.	H.G.
32.5	99.8	93.8	Os11g0307300	9639.m01888	-	Herbicide safener binding protein	6e-1	At3g16190	isochorismatase hydrolase family protein	O.I.	C.G.	H.G.
30.9	99.7	20.5	Os06g0302000	AK106070.1	-	Hypothetical protein	3e+0	At1g06475	unknown protein	O.I.	C.G.	H.G.
29.2	99.7	0.0	Os12g0202700	9640.m00951	-	O-methyltransferase, family 2 protein	4e-1	At1g18800	NRP2 (NAP1-RELATED PROTEIN 2)	O.I.	C.G.	H.G.
29.0	99.7	243.2	Os04g0521100	9632.m04226	-	Plasma membrane intrinsic protein (Aquaporin)	1e-42	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	O.I.	C.G.	H.G.
25.0	99.5	325.2	Os05g0114700	AK111634.1	-	Myb, DNA-binding domain containing protein	7e-5	At4g38620	MYB4	O.I.	C.G.	H.G.
24.4	99.4	2.7	Os04g0178300	AK100631.1	-	Copalyl diphosphate synthetase (Fragment)	3e-1	At4g01200	C2 domain-containing protein	O.I.	C.G.	H.G.
24.1	99.4	2.7	Os10g0516900	AK107070.1	-	Conserved hypothetical protein	6e+0	At4g33130	-	O.I.	C.G.	H.G.
23.7	99.4	27.2	Os11g0700500	AK111626.1	-	Myb, DNA-binding domain containing protein	1e-8	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	O.I.	C.G.	H.G.
22.3	99.3	14.2	Os05g0493800	AK110589.1	-	MtN21 nodulin protein-like	6e-11	At5g07050	-	O.I.	C.G.	H.G.
21.8	99.2	9.3	Os12g0567300	AK107214.1	-	Snapdragon myb protein 305 homolog	5e-14	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	O.I.	C.G.	H.G.
21.3	99.2	29.4	Os12g0555200	AK070762.1	-	Probenazole-inducible protein PBZ1	2e+0	At2g34530	unknown protein	O.I.	C.G.	H.G.
21.1	99.2	7.1	Os06g0717200	AK111824.1	-	Leucine-rich repeat/receptor protein kinaseprecursor	7e-12	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	O.I.	C.G.	H.G.
20.7	99.2	2.4	Os12g0490000	CA762266	-	Mitochodrial transcription terminationfactor-related family protein	5e+0	At4g08170	inositol 1,3,4-trisphosphate 5/6-kinase family protein	O.I.	C.G.	H.G.
20.0	99.1	0.9	Os03g0360200	AK110606.1	-	Hypothetical protein	2e+0	At4g05070	unknown protein	O.I.	C.G.	H.G.
19.9	99.1	2.6	Os05g0515500	AK068905.1	-	O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)	7e-1	At1g53625	unknown protein	O.I.	C.G.	H.G.
19.0	99.0	454.8	Os09g0409100	9637.m02088	-	Conserved hypothetical protein	2e+0	At5g51590	DNA-binding protein-related	O.I.	C.G.	H.G.

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GSM ID	GSM262008
Assay name	IAC165, 11 days after infection with S. hermonthica, biological replicate #1
GSE experiment	GSE10373: Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica

Microarray experiments to specifically-expressed genes

GSM ID GSM262008 Assay name IAC165, 11 days after infection with S. hermonthica, biological replicate #1 GSE experiment GSE10373: Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica

GSM ID GSM262008

Assay name IAC165, 11 days after infection with S. hermonthica, biological replicate #1

GSE experiment GSE10373: Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica