Microarray experiments to specifically-expressed genes

GSM ID GSM261051
Assay name Bonus Control rep2
GSE experiment GSE10332: Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
35.899.9221.1HVSMEf0015C12f_atHVSMEf0015C12f--3e+0At3g26060ATPRX QO.I.C.G.H.G.
35.499.90.1Contig949_atContig949--8e-28At1g29910CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3)O.I.C.G.H.G.
32.399.918.0EBma08_SQ002_M18_atEBma08_SQ002_M18--2e+0At4g37830cytochrome c oxidase-relatedO.I.C.G.H.G.
27.299.80.0Contig25788_atContig25788--1e+0At3g14670unknown proteinO.I.C.G.H.G.
24.699.82.0HVSMEg0006C07r2_atHVSMEg0006C07r2--3e-4At1g08380PSAO (photosystem I subunit O)O.I.C.G.H.G.
23.899.8130.2Contig418_atContig418--4e-29At2g34430LHB1B1O.I.C.G.H.G.
23.099.80.1HVSMEm0009E18r2_atHVSMEm0009E18r2--7e-1At3g59670unknown proteinO.I.C.G.H.G.
22.199.830.4HV_CEa0013J19f_atHV_CEa0013J19f--2e-109Atcg00350-O.I.C.G.H.G.
21.699.80.3HVSMEf0019H18r2_atHVSMEf0019H18r2--1e-2At3g26520TIP2 (TONOPLAST INTRINSIC PROTEIN 2)O.I.C.G.H.G.
21.499.70.0HVSMEl0022I24r2_atHVSMEl0022I24r2--2e-1At1g50090aminotransferase class IV family proteinO.I.C.G.H.G.
21.199.71.2HY08M06u_atHY08M06u--6e+0At5g37860copper-binding family proteinO.I.C.G.H.G.
20.899.71.3X12735_atX12735--8e-34At2g34420LHB1B2O.I.C.G.H.G.
20.399.70.2HVSMEm0020L23r2_x_atHVSMEm0020L23r2--7e-8At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)O.I.C.G.H.G.
17.699.60.0HVSMEm0003I04r2_atHVSMEm0003I04r2--3e-1At3g61490glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.C.G.H.G.
17.599.644.3MitoContig1_atMitoContig1--3e+0At5g62480ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)O.I.C.G.H.G.
17.499.60.0HT07M21u_atHT07M21u--2e+0At1g22780PFL (POINTED FIRST LEAVES)O.I.C.G.H.G.
17.299.613.3HVSMEa0022N20f_atHVSMEa0022N20f--7e-20Atcg00630-O.I.C.G.H.G.
17.299.60.1rbaal10k01_atrbaal10k01--3e+0At1g29550eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putativeO.I.C.G.H.G.
16.999.60.0HVSMEl0011N07r2_atHVSMEl0011N07r2--4e-4At3g47870LBD27 (LOB DOMAIN-CONTAINING PROTEIN 27)O.I.C.G.H.G.
16.199.640.8baak32n13_atbaak32n13--8e-23At1g29930CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)O.I.C.G.H.G.
16.099.626.7HVSMEc0016D02f_atHVSMEc0016D02f--2e-83Atcg00350-O.I.C.G.H.G.
16.099.60.0ChlorContig2_x_atChlorContig2--7e+0At5g40700unknown proteinO.I.C.G.H.G.
15.999.60.1Contig18358_x_atContig18358--2e-1At3g52380CP33O.I.C.G.H.G.
15.899.60.7Contig9042_x_atContig9042--3e+0At3g56580zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
15.699.6170.1EBro02_SQ006_D14_s_atEBro02_SQ006_D14--4e+0At3g17580unknown proteinO.I.C.G.H.G.
15.399.622.1HVSMEh0080L10r2_x_atHVSMEh0080L10r2--6e-11At3g54890LHCA1O.I.C.G.H.G.
15.399.61.3Contig1768_atContig1768--8e-1At2g20616unknown proteinO.I.C.G.H.G.
15.399.60.0bags4j01_atbags4j01--3e+0At5g15060-O.I.C.G.H.G.
15.099.51.3Contig20602_atContig20602--4e+0At4g35930-O.I.C.G.H.G.
14.699.50.1Contig6630_atContig6630--3e-3At1g72960root hair defective 3 GTP-binding (RHD3) family proteinO.I.C.G.H.G.
14.399.517.0Contig425_atContig425--1e-20At2g34420LHB1B2O.I.C.G.H.G.
14.299.52.4Contig1846_atContig1846--9e-29At4g35090CAT2 (CATALASE 2)O.I.C.G.H.G.
14.299.50.0baak3d17_atbaak3d17--4e+0At1g26762unknown proteinO.I.C.G.H.G.
14.199.546.5Contig433_x_atContig433--3e-17At1g29910CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3)O.I.C.G.H.G.
14.199.50.1HVSMEc0016J13f_atHVSMEc0016J13f--3e-33Atcg00350-O.I.C.G.H.G.
13.999.50.0HVSMEm0006K19r2_atHVSMEm0006K19r2--7e-1At5g64770unknown proteinO.I.C.G.H.G.
13.899.592.6Contig432_x_atContig432--1e-29At2g34430LHB1B1O.I.C.G.H.G.
13.899.50.7Contig1004_x_atContig1004--3e-8At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)O.I.C.G.H.G.
13.899.50.1HVSMEa0011L19r2_atHVSMEa0011L19r2--5e-2At3g502102-oxoacid-dependent oxidase, putativeO.I.C.G.H.G.
13.899.50.0EBma01_SQ001_F22_atEBma01_SQ001_F22--4e+0At1g20830unknown proteinO.I.C.G.H.G.
13.599.50.0Contig18320_atContig18320--1e+0At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)O.I.C.G.H.G.
13.399.40.0HO06E11S_atHO06E11S--2e-1At1g72070DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.H.G.
13.299.42.0Contig9376_atContig9376--1e-11At5g02810PRR7 (PSEUDO-RESPONSE REGULATOR 7)O.I.C.G.H.G.
13.199.457.0Contig422_atContig422--8e-25At1g29930CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)O.I.C.G.H.G.
13.099.40.3HVSMEn0017L11f_atHVSMEn0017L11f--1e-7At1g29920CAB2 (CHLOROPHYLL A/B-BINDING PROTEIN 2)O.I.C.G.H.G.
12.999.40.2Contig8523_s_atContig8523--9e-13At3g52820PAP22 (PURPLE ACID PHOSPHATASE 22)O.I.C.G.H.G.
12.999.40.2HW01E12u_atHW01E12u--1e+0At3g49820unknown proteinO.I.C.G.H.G.
12.899.42.6rbaal38f16_atrbaal38f16--4e+0At4g03960tyrosine specific protein phosphatase family proteinO.I.C.G.H.G.
12.799.40.1HS03L15u_atHS03L15u--1e+0At5g18690AGP25 (ARABINOGALACTAN PROTEINS 25)O.I.C.G.H.G.
12.799.40.1HVSMEc0009D22f_atHVSMEc0009D22f--5e+0Atmg00240-O.I.C.G.H.G.
12.699.420.4Contig837_x_atContig837--1e-26At2g34430LHB1B1O.I.C.G.H.G.
12.599.40.0HVSMEa0001E11r2_atHVSMEa0001E11r2--3e+0At1g75180unknown proteinO.I.C.G.H.G.
12.399.40.4Contig3605_atContig3605--3e+0At3g55570unknown proteinO.I.C.G.H.G.
12.199.30.0HVSMEn0012P04f2_atHVSMEn0012P04f2--2e-1At3g63030MBD4O.I.C.G.H.G.
12.099.369.0Contig981_s_atContig981--7e-18At2g34420LHB1B2O.I.C.G.H.G.
12.099.362.8Contig5185_atContig5185--2e+0At2g41480electron carrier/ heme binding / peroxidaseO.I.C.G.H.G.
11.999.30.1Contig13704_atContig13704--2e+0At5g56100glycine-rich protein / oleosinO.I.C.G.H.G.
11.799.30.0HA25M06r_atHA25M06r--6e-17At3g2339060S ribosomal protein L36a/L44 (RPL36aA)O.I.C.G.H.G.
11.699.30.6HVSMEm0002P02r2_x_atHVSMEm0002P02r2--4e+0At5g44720molybdenum cofactor sulfurase family proteinO.I.C.G.H.G.
11.599.30.0HD01G02w_atHD01G02w--7e+0At3g62070unknown proteinO.I.C.G.H.G.
11.599.30.0rbaal1n19_atrbaal1n19--2e-8At1g79850RPS17 (RIBOSOMAL PROTEIN S17)O.I.C.G.H.G.
11.499.33.2Contig8526_s_atContig8526--5e-1At5g14430dehydration-responsive protein-relatedO.I.C.G.H.G.
11.499.30.5HVSMEc0009D09f_atHVSMEc0009D09f--4e-39Atcg00330-O.I.C.G.H.G.
11.499.30.1HU14G21u_atHU14G21u--6e-11At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)O.I.C.G.H.G.
11.499.30.1rbah53j14_atrbah53j14--4e-2At3g26650GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT)O.I.C.G.H.G.
11.499.30.0HV06E21u_atHV06E21u--4e+0At3g49390CID10O.I.C.G.H.G.
11.399.30.0EBro02_SQ006_D14_atEBro02_SQ006_D14--4e+0At3g17580unknown proteinO.I.C.G.H.G.
11.199.22.3Contig14822_atContig14822--2e+0At1g02780emb2386 (embryo defective 2386)O.I.C.G.H.G.
11.199.20.0HA28K24r_atHA28K24r--1e+1At5g21430DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.H.G.
11.199.20.0HVSMEi0002J01r2_x_atHVSMEi0002J01r2--6e+0At4g39150DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.H.G.
10.999.20.0HVSMEh0088E17r2_atHVSMEh0088E17r2--5e-1At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.C.G.H.G.
10.899.229.2HVSMEn0020J05f_x_atHVSMEn0020J05f--2e-1At3g12345unknown proteinO.I.C.G.H.G.
10.899.20.0Contig26537_atContig26537--8e+0At5g47435formyltetrahydrofolate deformylase, putativeO.I.C.G.H.G.
10.799.20.0Contig23214_atContig23214--4e+0At5g10860CBS domain-containing proteinO.I.C.G.H.G.
10.799.20.0HVSMEl0006C17r2_atHVSMEl0006C17r2--1e+0At4g32090galactosyltransferaseO.I.C.G.H.G.
10.799.20.0HVSMEm0019M14r2_atHVSMEm0019M14r2--1e+1At3g4896060S ribosomal protein L13 (RPL13C)O.I.C.G.H.G.
10.799.20.0Mla12DH_orf_3pri12_atMla12DH_orf_3pri12--6e-1At4g2362050S ribosomal protein-relatedO.I.C.G.H.G.
10.599.20.0HVSMEg0006G16f_atHVSMEg0006G16f--1e+0At3g60180uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putativeO.I.C.G.H.G.
10.499.24.5HZ40F21r_atHZ40F21r--5e-32Atcg00490-O.I.C.G.H.G.
10.499.20.0HVSMEb0009O24f_atHVSMEb0009O24f--9e-16At1g49140NADH-ubiquinone oxidoreductase-relatedO.I.C.G.H.G.
10.499.20.0rbags3n19_atrbags3n19--8e-1At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)O.I.C.G.H.G.
10.399.1121.8HV_CEb0010M11f_atHV_CEb0010M11f--5e-61Atcg01060-O.I.C.G.H.G.
10.399.14.4Contig21141_atContig21141--5e+0At5g10870ATCM2 (chorismate mutase 2)O.I.C.G.H.G.
10.399.10.1HVSMEc0005H22f_x_atHVSMEc0005H22f--8e+0At5g40700unknown proteinO.I.C.G.H.G.
10.299.160.6Contig21096_atContig21096--5e+0At3g12930-O.I.C.G.H.G.
10.299.10.6baak1b18_atbaak1b18--4e-22At2g34420LHB1B2O.I.C.G.H.G.
10.299.10.0HVSMEg0013O09r2_atHVSMEg0013O09r2--3e+0At4g11370RHA1AO.I.C.G.H.G.
10.199.187.5Contig828_s_atContig828--1e-26At2g34430LHB1B1O.I.C.G.H.G.
10.199.121.0Contig2985_s_atContig2985--9e-43At5g13630GUN5 (GENOMES UNCOUPLED 5)O.I.C.G.H.G.
9.999.1165.9HVSMEc0011A03f_atHVSMEc0011A03f--1e-23Atcg00520-O.I.C.G.H.G.
9.999.12.3Contig960_s_atContig960--1e-23At2g34420LHB1B2O.I.C.G.H.G.
9.899.10.5Contig18956_atContig18956--8e-2At3g58340meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.C.G.H.G.
9.799.03.0HW01B13u_atHW01B13u--4e-1At2g40380PRA1.B2 (PRENYLATED RAB ACCEPTOR 1.B2)O.I.C.G.H.G.
9.799.01.7Contig15590_atContig15590--1e+1At4g02250invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
9.799.00.0Contig17772_atContig17772--4e-1At3g57900unknown proteinO.I.C.G.H.G.
9.799.00.0Contig22670_atContig22670--7e+0Atmg00285-O.I.C.G.H.G.
9.699.076.9Contig6_x_atContig6--1e-33At2g34430LHB1B1O.I.C.G.H.G.
9.699.042.8HVSMEc0015H24f_atHVSMEc0015H24f--1e-86Atcg00430-O.I.C.G.H.G.
9.699.014.4Contig8578_atContig8578--1e-1At3g50330HEC2 (HECATE 2)O.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage