Microarray experiments to specifically-expressed genes

GSM ID GSM253652
Assay name Ler 2
GSE experiment GSE10039: Low_Mo_Arabidopsis_mapping_MOT1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
738.6100.091.4At4g029603769842transposable element genea copia-type retrotransposon element containing LTRs and encoding a polyprotein. This retro element exists in two loci in Landsberg erecta but only once in ColumbiaO.I.C.G.H.G.
699.3100.0257.8At1g356473766954transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
690.7100.096.8At5g10680830932calmodulin-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFVPAO.I.C.G.H.G.
661.9100.068.6At1g33710840262-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
595.7100.0122.7At3g625203769771transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
548.8100.042.2At4g01110827897-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
532.3100.030.4At5g48770834935disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAO.I.C.G.H.G.
519.5100.037.6At1g60500842345dynamin family proteinF:GTP binding, GTPase activity;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
514.1100.075.1At3g45430823681lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.C.G.H.G.
514.1100.039.5At2g27280817270unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
507.4100.061.9At4g09940826584avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinF:GTP binding;P:response to bacterium;C:plasma membrane;MOBFPAVO.I.C.G.H.G.
504.4100.039.7At4g15150827181glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVAO.I.C.G.H.G.
503.9100.040.3At2g35080818074ATP binding / aminoacyl-tRNA ligase/ nucleotide bindingF:aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:translation, tRNA aminoacylation for protein translation;C:cytoplasm;PO.I.C.G.H.G.
502.5100.065.9At2g13640815849Golgi GDP mannose transporter (GONST1)F:unknown;P:transcription;C:nucleus;OMBPFVAO.I.C.G.H.G.
501.6100.0178.1At2g055803768507unknown proteinF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
501.2100.075.3At2g107803767798transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
500.0100.0106.0At1g79170844258unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMO.I.C.G.H.G.
497.2100.057.1At3g29420822603geranylgeranyl pyrophosphate synthase-related / GGPP synthetase-related / farnesyltranstransferase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
494.7100.030.9At5g36810833648unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
494.5100.042.2At5g37730833751unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
485.6100.0140.7At5g401303771383-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
480.3100.049.3At3g170503768842transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
478.8100.022.3At2g26160817156-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
466.6100.038.3At3g223403768898transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
466.5100.0298.7At3g44140823535unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
464.3100.037.6At1g62410842539MIF4G domain-containing proteinF:translation initiation factor activity;P:translation, RNA metabolic process;C:endomembrane system;MOFPO.I.C.G.H.G.
459.0100.088.8At4g25510828655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
455.4100.042.6At4g21950828284unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
454.9100.065.1At2g070103768372transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
454.1100.0191.9At4g22500--O.I.C.G.H.G.
451.0100.051.7At1g046253766658nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:cellular_component unknownO.I.C.G.H.G.
450.6100.084.7At3g440003769616transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
442.4100.052.8At5g38400833827unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPO.I.C.G.H.G.
436.9100.042.4At2g059803767787transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
432.9100.043.0At2g15600816053transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
432.7100.0126.3At3g27550822377group II intron splicing factor CRS1-relatedF:RNA binding;P:unknown;C:unknown;BMOFPVAO.I.C.G.H.G.
431.3100.049.3At4g16090827294unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
430.9100.0501.8At2g108803768614transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
429.8100.0111.5At3g59180825087-F:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
429.3100.0135.3At5g27160832774transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
425.7100.036.4At2g16200816117protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, Golgi-associated vesicle;POO.I.C.G.H.G.
421.4100.039.0At5g51800835255-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBVAO.I.C.G.H.G.
420.4100.044.8At2g12900815769DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, chloroplast;MPOBFAO.I.C.G.H.G.
417.4100.056.3At2g19420816461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
414.2100.033.6At2g15610816054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
414.1100.0152.8At2g18540816369cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOBFPVAO.I.C.G.H.G.
411.3100.030.7At5g56570835758-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PFOO.I.C.G.H.G.
411.0100.0221.6At1g59171842233ATP binding / inositol pentakisphosphate 2-kinaseF:inositol pentakisphosphate 2-kinase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
410.0100.035.0At3g28520822482AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:mitochondrion;BOMFPAVO.I.C.G.H.G.
409.7100.0466.0At1g129353766713transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
407.5100.0371.7At2g022003768149transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
405.5100.071.9At1g49870841410-F:unknown;P:unknown;C:chloroplast;MOBFPAVO.I.C.G.H.G.
404.6100.077.7At4g31520829279SDA1 family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
404.5100.050.0At4g362303770585unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane systemO.I.C.G.H.G.
404.1100.047.0At3g11060820277unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
401.9100.0259.7At1g27570839648phosphatidylinositol 3- and 4-kinase family proteinF:inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:cellular_component unknown;PMOFO.I.C.G.H.G.
400.4100.025.1At5g52000835275IMPA-8 (IMPORTIN ALPHA ISOFORM 8)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.C.G.H.G.
397.9100.050.2At2g15670816060-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
392.1100.054.9At5g39640833960unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
392.1100.036.1At3g46170823760short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:response to cadmium ion;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
391.8100.037.1At3g52270824392ATP binding / RNA polymerase II transcription factorF:RNA polymerase II transcription factor activity, ATP binding;P:transcription initiation from RNA polymerase II promoter;C:transcription factor TFIIF complex;MFPOO.I.C.G.H.G.
391.6100.071.7At5g19170832037unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBO.I.C.G.H.G.
391.5100.082.9At5g09930830854ATGCN2member of GCN subfamilyO.I.C.G.H.G.
391.5100.050.1At5g37860833764copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:cellular_component unknown;POBFMO.I.C.G.H.G.
390.8100.026.8At2g31035817655-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
390.4100.041.9At2g144103768296-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
390.1100.0101.8At2g181153767908-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
389.2100.0102.7At1g33820840277unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBPO.I.C.G.H.G.
387.9100.024.3At1g27550839646F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
386.5100.060.2At1g32650840159unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownO.I.C.G.H.G.
384.8100.043.6At2g03370814866transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:endomembrane system;PMOBFO.I.C.G.H.G.
383.0100.0112.2At5g388703771365transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
382.0100.0130.5At1g15840838154unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFVAO.I.C.G.H.G.
381.6100.036.5At1g01700839250ROPGEF2Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.O.I.C.G.H.G.
381.5100.026.9At2g46375819245unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
380.7100.042.9At2g26960817237AtMYB81 (myb domain protein 81)Member of the R2R3 factor gene family.O.I.C.G.H.G.
379.1100.0269.8At3g320003769220transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
379.0100.0117.2At1g437453767315transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
377.5100.065.7At5g56780835780unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
376.9100.033.9At3g23650821945protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
376.4100.0132.1At5g356603771291-F:unknown;P:unknown;C:endomembrane systemO.I.C.G.H.G.
375.9100.022.5At4g02190828115DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOO.I.C.G.H.G.
373.7100.048.4At5g40410834039-F:unknown;P:biological_process unknown;C:unknown;POMFO.I.C.G.H.G.
373.7100.045.6At1g53940841833GLIP2Encodes a lipase, has in vitro lipase activity with p-nitrophenyl acetate and p-nitrophenyl butyrate, gene expression induced by hormones, negatively regulates auxin signaling, involved in disease resistanceO.I.C.G.H.G.
373.6100.022.7At1g31080839994F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
372.7100.085.9At5g06820830573SRF2 (STRUBBELIG-RECEPTOR FAMILY 2)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
372.7100.053.3At1g18530838434calmodulin, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBVO.I.C.G.H.G.
372.4100.046.4At5g03980830277GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:glycerol biosynthetic process, lipid metabolic process;C:endomembrane system;PBMOO.I.C.G.H.G.
372.2100.0838.3At2g010293767997transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
369.0100.0133.8At2g111803768078transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
368.8100.0118.6At4g10150826606zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.H.G.
367.8100.090.7At3g50540824218unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
367.7100.085.6At5g12990831139CLE40 (CLAVATA3/ESR-RELATED 40)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.O.I.C.G.H.G.
366.6100.019.8At4g03670825667transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
366.5100.09.0At4g086603770101transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
366.4100.062.0At3g50580824222unknown proteinF:unknown;P:unknown;C:endomembrane system;MOBPFVAO.I.C.G.H.G.
366.1100.029.2At1g31260840014ZIP10 (ZINC TRANSPORTER 10 PRECURSOR)member of Fe(II) transporter isolog familyO.I.C.G.H.G.
366.0100.094.8At3g44950823630glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFVAO.I.C.G.H.G.
365.2100.050.4At4g02950828123ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;PMOVFBO.I.C.G.H.G.
364.3100.073.6At1g41820840790unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPFO.I.C.G.H.G.



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