Microarray experiments to specifically-expressed genes

GSM ID GSM253651
Assay name Ler 1
GSE experiment GSE10039: Low_Mo_Arabidopsis_mapping_MOT1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1107.8100.075.1At1g64560842764-pseudogene of S-adenosylmethionine-dependent methyltransferase/rRNA (adenine-N6,N6-)-dimethyltransferase/rRNA methyltransferaseO.I.C.G.H.G.
1045.6100.079.0At2g04860815032pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POMFO.I.C.G.H.G.
815.5100.050.6At3g223403768898transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
798.8100.0390.8At3g44140823535unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
771.4100.074.1At1g33710840262-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
732.5100.040.5At5g49370834997-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
691.1100.032.5At1g27550839646F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
682.4100.0166.8At5g401303771383-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
644.5100.063.7At5g38400833827unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPO.I.C.G.H.G.
640.3100.093.3At5g10680830932calmodulin-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFVPAO.I.C.G.H.G.
596.6100.0166.3At5g356603771291-F:unknown;P:unknown;C:endomembrane systemO.I.C.G.H.G.
581.9100.0235.2At1g356473766954transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
577.0100.080.8At4g029603769842transposable element genea copia-type retrotransposon element containing LTRs and encoding a polyprotein. This retro element exists in two loci in Landsberg erecta but only once in ColumbiaO.I.C.G.H.G.
573.1100.044.8At1g01700839250ROPGEF2Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.O.I.C.G.H.G.
568.8100.0112.8At3g50540824218unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
558.8100.0105.2At2g43220818923DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMOBO.I.C.G.H.G.
551.8100.0176.4At2g18540816369cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOBFPVAO.I.C.G.H.G.
549.6100.0156.5At1g15840838154unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFVAO.I.C.G.H.G.
549.6100.060.9At3g47840823940pentatricopeptide (PPR) repeat-containing proteinF:binding;P:biological_process unknown;C:unknown;POMFBO.I.C.G.H.G.
545.2100.090.2At4g31520829279SDA1 family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
544.5100.052.5At3g170503768842transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
532.7100.072.3At1g61410842435tolA protein-relatedF:protein binding, DNA binding;P:double-strand break repair, DNA recombination;C:nucleus;BPMFOO.I.C.G.H.G.
531.7100.063.3At5g07780830671formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MPOBFVAO.I.C.G.H.G.
518.8100.073.9At5g28140832888transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
516.7100.0226.3At1g44990841064unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane systemO.I.C.G.H.G.
514.4100.081.0At1g49870841410-F:unknown;P:unknown;C:chloroplast;MOBFPAVO.I.C.G.H.G.
513.9100.0146.6At4g220203770103-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
512.8100.035.7At3g15870820830oxidoreductaseF:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPVO.I.C.G.H.G.
506.6100.0113.1At3g625203769771transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
506.1100.061.9At4g09940826584avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinF:GTP binding;P:response to bacterium;C:plasma membrane;MOBFPAVO.I.C.G.H.G.
502.5100.0106.3At1g79170844258unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMO.I.C.G.H.G.
501.7100.040.8At3g24710822068-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
494.5100.024.2At2g18640816379GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4)Encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthaseO.I.C.G.H.G.
489.4100.029.7At4g26290828735unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOO.I.C.G.H.G.
487.2100.0109.8At1g34280840328unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownO.I.C.G.H.G.
485.4100.0133.8At3g27550822377group II intron splicing factor CRS1-relatedF:RNA binding;P:unknown;C:unknown;BMOFPVAO.I.C.G.H.G.
483.4100.041.7At5g51800835255-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBVAO.I.C.G.H.G.
482.3100.058.2At1g33670840258leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAO.I.C.G.H.G.
482.3100.055.4At1g35890840491DNA bindingF:DNA binding;P:regulation of transcription;C:cellular_component unknown;POO.I.C.G.H.G.
482.2100.0118.1At3g59180825087-F:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
481.6100.0197.6At4g22500--O.I.C.G.H.G.
473.7100.028.6At5g48770834935disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAO.I.C.G.H.G.
471.2100.048.6At4g17585827476unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
470.6100.067.3At3g03290821301universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:unknown;PMOFO.I.C.G.H.G.
468.5100.035.9At1g52840841718transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
466.8100.078.0At1g02570839485unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
464.4100.051.8At5g03980830277GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:glycerol biosynthetic process, lipid metabolic process;C:endomembrane system;PBMOO.I.C.G.H.G.
463.3100.078.0At5g19170832037unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBO.I.C.G.H.G.
462.6100.0114.2At5g60350836157unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPO.I.C.G.H.G.
460.8100.0106.4At3g44950823630glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFVAO.I.C.G.H.G.
456.8100.032.4At5g56570835758-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PFOO.I.C.G.H.G.
455.5100.0139.0At3g42130823185glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVO.I.C.G.H.G.
453.4100.096.2At5g63720836492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MBOFPVO.I.C.G.H.G.
452.1100.046.7At2g26960817237AtMYB81 (myb domain protein 81)Member of the R2R3 factor gene family.O.I.C.G.H.G.
446.8100.094.1At5g06820830573SRF2 (STRUBBELIG-RECEPTOR FAMILY 2)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
446.6100.041.0At4g121603770024-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
444.3100.081.6At2g34800818045unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
443.1100.053.1At1g16910838262LSH8 (LIGHT SENSITIVE HYPOCOTYLS 8)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
439.5100.027.5At5g27170832775unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplastO.I.C.G.H.G.
439.3100.086.8At4g25510828655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
437.7100.036.9At2g16200816117protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, Golgi-associated vesicle;POO.I.C.G.H.G.
437.1100.0104.6At4g09080826486TOC75-IVComponent of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Knockout mutants have abnormal etioplasts.O.I.C.G.H.G.
434.2100.0108.5At1g33820840277unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBPO.I.C.G.H.G.
432.8100.057.7At4g31960829326unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
431.4100.0206.5At1g29730839851ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
429.8100.097.1At4g00770828010unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFVBO.I.C.G.H.G.
427.9100.0164.5At2g055803768507unknown proteinF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
426.1100.064.2At2g32490817810-pseudogene of 3'-5' exonuclease domain-containing proteinO.I.C.G.H.G.
426.1100.052.9At3g29420822603geranylgeranyl pyrophosphate synthase-related / GGPP synthetase-related / farnesyltranstransferase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
425.7100.0134.7At5g27160832774transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
425.5100.034.3At2g467303768748-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
424.4100.0895.1At2g010293767997transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
424.2100.094.2At2g30560817605glycine-rich proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MBOPFVAO.I.C.G.H.G.
421.0100.075.7At3g05720819741IMPA-7 (IMPORTIN ALPHA ISOFORM 7)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.C.G.H.G.
417.1100.062.3At4g19570827699DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFVAO.I.C.G.H.G.
416.8100.062.5At1g32650840159unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownO.I.C.G.H.G.
415.9100.024.0At1g31080839994F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
411.6100.080.9At3g440003769616transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
410.9100.043.0At2g144103768296-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
410.6100.0104.5At2g181153767908-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
408.7100.041.0At2g059803767787transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
402.0100.029.2At3g04800819640ATTIM23-3F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:protein transport;C:mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex;MFPOO.I.C.G.H.G.
401.5100.0138.7At4g09740826560AtGH9B14 (Arabidopsis thaliana glycosyl hydrolase 9B14)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFO.I.C.G.H.G.
401.5100.0106.1At1g10320837571U2 snRNP auxiliary factor-relatedF:RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding;P:unknown;C:nucleus;MOBFPVAO.I.C.G.H.G.
400.4100.086.2At2g34580818022unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPAVO.I.C.G.H.G.
397.6100.060.9At2g070103768372transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
393.4100.026.9At2g31035817655-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
392.8100.0142.0At1g437403767314transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
391.8100.076.6At1g64690842777unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
389.2100.079.2At2g15660816059AGL95 (AGAMOUS-LIKE 95)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PO.I.C.G.H.G.
388.5100.049.2At2g133303767777transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
388.1100.037.5At1g03490839487ANAC006 (Arabidopsis NAC domain containing protein 6)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOVBFO.I.C.G.H.G.
386.5100.069.0At1g15830838153unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MBOPFVAO.I.C.G.H.G.
385.0100.026.8At1g80580844397ethylene-responsive element-binding family proteinencodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.O.I.C.G.H.G.
384.4100.020.8At4g17930827518unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
383.3100.035.2At4g01110827897-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
382.6100.026.5At5g35760833555beta-galactosidaseF:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;PO.I.C.G.H.G.
382.1100.035.9At2g43860818990polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.H.G.
381.4100.070.2At5g44330834458male sterility MS5 family proteinF:binding;P:biological_process unknown;C:unknown;POBAO.I.C.G.H.G.
380.5100.051.3At5g60240836146unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownO.I.C.G.H.G.



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