Microarray experiments to specifically-expressed genes

GSM ID GSM253200
Assay name Nontransgenic(ga1-3rgargl2)-DEX-REP2
GSE experiment GSE10019: Identification of RGA downstream genes by using steroid-inducible system

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
137.099.9193.0At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
96.899.992.3At2g20720816600pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
95.899.910.0At1g05577837062unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
87.899.9666.8At3g15400820779ATA20Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein.O.I.C.G.H.G.
83.499.9273.7At1g75940843927ATA27encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.O.I.C.G.H.G.
80.699.967.3At1g23570838967unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
76.599.9134.1At1g06260837137cysteine proteinase, putativeF:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFO.I.C.G.H.G.
75.999.9188.9At3g25050822096XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3)encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.O.I.C.G.H.G.
71.299.9155.9At1g32350840127AOX1D (alternative oxidase 1D)F:alternative oxidase activity;P:oxidation reduction, response to cyclopentenone;C:mitochondrial envelope, mitochondrion;OPFBMO.I.C.G.H.G.
69.499.9198.8At5g62080836328protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
68.299.982.2At1g02050839280chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOFO.I.C.G.H.G.
67.999.9199.1At1g75910843924EXL4member of Lipase proteinsO.I.C.G.H.G.
67.999.974.2At3g26125822212CYP86C2encodes a protein with cytochrome P450 domainO.I.C.G.H.G.
66.899.828.9At5g61320836253CYP89A3member of CYP89AO.I.C.G.H.G.
65.499.853.4At1g74540843795CYP98A8member of CYP98AO.I.C.G.H.G.
65.399.8263.6At3g51590824322LTP12 (LIPID TRANSFER PROTEIN 12)Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.O.I.C.G.H.G.
64.399.885.6At5g16960831559NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPAO.I.C.G.H.G.
64.299.869.0At1g13140837871CYP86C3member of CYP86CO.I.C.G.H.G.
62.299.8239.3At5g07560830649GRP20 (GLYCINE-RICH PROTEIN 20)Lipid-binding oleosins, glycine-rich protein.O.I.C.G.H.G.
61.799.8525.1At1g66850843003protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
60.699.8213.6At1g68875843220unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
59.899.8134.4At4g14080827044MEE48 (maternal effect embryo arrest 48)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;POO.I.C.G.H.G.
59.099.8474.3At5g07550830648GRP19 (GLYCINE-RICH PROTEIN 19)member of Oleosin-like protein familyO.I.C.G.H.G.
55.499.871.6At1g20120838601family II extracellular lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAVO.I.C.G.H.G.
53.499.8101.6At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOO.I.C.G.H.G.
53.299.8156.8At1g67990843127TSM1Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting.O.I.C.G.H.G.
53.099.883.8At2g03740814901late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFAO.I.C.G.H.G.
52.999.865.2At1g28375839734unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
52.499.897.9At2g03850814911late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFAO.I.C.G.H.G.
51.699.8145.9At5g07230830614protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
48.899.8213.0At4g37370829891CYP81D8member of CYP81DO.I.C.G.H.G.
47.799.844.9At2g19070816424SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE)encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091)O.I.C.G.H.G.
47.499.8205.6At2g03760814903STEncodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.O.I.C.G.H.G.
47.399.877.5At4g34850829637chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOFO.I.C.G.H.G.
45.799.865.5At5g16920831555-F:molecular_function unknown;P:unknown;C:endomembrane system;POO.I.C.G.H.G.
43.999.8126.4At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
43.599.8235.7At5g24420832513glucosamine/galactosamine-6-phosphate isomerase-relatedF:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFPO.I.C.G.H.G.
43.099.8157.8At1g75930843926EXL6member of Lipase proteinsO.I.C.G.H.G.
42.499.815.2At5g62320836353ATMYB99 (MYB DOMAIN PROTEIN 99)Encodes a putative transcription factor (MYB99).O.I.C.G.H.G.
42.299.847.5At5g07520830645GRP18 (GLYCINE-RICH PROTEIN 18)encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12).O.I.C.G.H.G.
41.699.826.0At1g75790843912sks18 (SKU5 Similar 18)F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAO.I.C.G.H.G.
41.199.896.7At1g32940840188SBT3.5F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFMO.I.C.G.H.G.
41.099.890.6At3g52130824377protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
40.899.851.1At1g07340837245ATSTP2 (SUGAR TRANSPORTER 2)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity;P:pollen development, monosaccharide transport;C:integral to plasma membrane, membrane;FBMPOAO.I.C.G.H.G.
40.299.889.1At4g37900829946glycine-rich proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVAO.I.C.G.H.G.
40.299.887.7At4g35420829695dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase familyF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAVO.I.C.G.H.G.
39.699.8129.3At4g20420827790tapetum-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
39.599.870.0At1g68540843183oxidoreductase family proteinF:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAVO.I.C.G.H.G.
39.399.854.9At1g32870840181ANAC13 (Arabidopsis thaliana NAC domain protein 13)F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMFO.I.C.G.H.G.
39.299.8128.6At1g33430840236galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:pollen exine formation;C:endomembrane system, membrane;MPOO.I.C.G.H.G.
38.899.818.9At1g23590838969unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
38.699.842.3At5g65205836644short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
38.399.8169.7At4g08670826433protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFVO.I.C.G.H.G.
38.099.8249.9At5g07530830646GRP17 (GLYCINE RICH PROTEIN 17)encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.O.I.C.G.H.G.
37.499.770.2At3g61630825336CRF6 (CYTOKININ RESPONSE FACTOR 6)CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.O.I.C.G.H.G.
37.099.7170.6At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
36.999.760.4At5g48210834874unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
36.499.755.7At1g69500843283electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingF:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAVO.I.C.G.H.G.
36.099.727.0At3g13220820512ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPVO.I.C.G.H.G.
36.099.726.9At3g57620824931glyoxal oxidase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOMO.I.C.G.H.G.
34.799.742.2At5g13380831179auxin-responsive GH3 family proteinF:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMFO.I.C.G.H.G.
33.699.762.3At1g61110842404anac025 (Arabidopsis NAC domain containing protein 25)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POO.I.C.G.H.G.
33.599.7250.9At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
32.699.774.7At4g28395828956ATA7related to lipid transfer proteinsO.I.C.G.H.G.
32.299.763.4At3g42960823352ATA1 (ARABIDOPSIS TAPETUM 1)Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.O.I.C.G.H.G.
32.199.740.9At3g52160824381KCS15 (3-KETOACYL-COA SYNTHASE 15)Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).O.I.C.G.H.G.
31.899.7100.5At5g09570830816-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOO.I.C.G.H.G.
31.399.7160.9At2g47000819314ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)Multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.O.I.C.G.H.G.
31.399.750.4At1g62940842596ACOS5 (ACYL-COA SYNTHETASE 5)encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.O.I.C.G.H.G.
30.699.754.3At3g11980820372MS2 (MALE STERILITY 2)Similar to fatty acid reductases.O.I.C.G.H.G.
29.999.746.3At1g74870843826protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
29.899.726.1At1g13150837873CYP86C4member of CYP86CO.I.C.G.H.G.
29.399.776.7At1g05060839336unknown proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
29.299.791.3At5g40260834024nodulin MtN3 family proteinF:unknown;P:pollen wall assembly;C:plasma membrane, membrane;PMOBO.I.C.G.H.G.
29.099.733.8At1g01280839470CYP703A2 (CYTOCHROME P450, FAMILY 703, SUBFAMILY A, POLYPEPTIDE 2)member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).O.I.C.G.H.G.
28.699.759.5At4g21590828245ENDO3 (endonuclease 3)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.O.I.C.G.H.G.
28.699.714.2At4g15200827184actin bindingF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
28.399.735.7At4g29980829121unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
28.199.7110.1At1g10170837555ATNFXL1 (ARABIDOPSIS THALIANA NF-X-LIKE 1)Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.O.I.C.G.H.G.
27.899.716.9At2g03130814842ribosomal protein L12 family proteinF:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMFO.I.C.G.H.G.
27.199.714.4At1g06990837209GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
26.799.7234.5At4g04460825776aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPBO.I.C.G.H.G.
26.799.766.1At2g04050814939MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
26.599.763.3At1g02813839360unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;POO.I.C.G.H.G.
26.599.712.7At1g06170837126basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOO.I.C.G.H.G.
26.099.730.9At1g08065837324ACA5 (ALPHA CARBONIC ANHYDRASE 5)F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:endomembrane system;MBPOFVO.I.C.G.H.G.
25.899.736.8At1g24600839074unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.599.729.6At2g42940818895DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:chloroplast;PBOO.I.C.G.H.G.
25.499.619.6At1g23670838977unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.299.6127.4At1g47980841216unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO.I.C.G.H.G.
25.299.670.4At2g36790818251UGT73C6 (UDP-glucosyl transferase 73C6)The At2g36790 gene encodes a UDP-glucose:flavonol-3-O-glycoside-7-O-glucosyltransferase (UGT73C6)attaching a glucosyl residue to the 7-O-position of the flavonols kaempferol, quercetin and their 3-O-glycoside derivatives.O.I.C.G.H.G.
25.199.644.7At4g14815827138protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PO.I.C.G.H.G.
24.999.6143.0At2g44130819019kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFAVO.I.C.G.H.G.
24.999.617.4At2g18420816357-Encodes a Gibberellin-regulated GASA/GAST/Snakin family proteinO.I.C.G.H.G.
24.799.619.9At1g71160843456KCS7 (3-KETOACYL-COA SYNTHASE 7)Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).O.I.C.G.H.G.
24.499.664.2At3g07450819933protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
24.199.639.9At1g75920843925family II extracellular lipase 5 (EXL5)F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOMO.I.C.G.H.G.
23.399.6404.8At3g07850819976exopolygalacturonase / galacturan 1,4-alpha-galacturonidase / pectinaseF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMVAO.I.C.G.H.G.
23.099.651.5At1g75030843841ATLP-3encodes a PR5-like proteinO.I.C.G.H.G.
22.899.618.9At1g32780840172alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAVO.I.C.G.H.G.



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